BAC Information

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BAC

Clone NameB6Ng01-153N03
Chromosome8 (Build37)
Map Location 115,721,272 - 115,836,702
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042040, Cntnap4, LOC100042061
Downstream geneMon1b, 4930481F22Rik, Adamts18, Nudt7, AI427515
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153N03.bB6Ng01-153N03.g
ACCDH949024DH949025
length1,0761,094
definitionDH949024|Mus musculus domesticus DNA, BAC clone: B6Ng01-153N03, 5' end.DH949025|Mus musculus domesticus DNA, BAC clone: B6Ng01-153N03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,835,630 - 115,836,702)(115,721,272 - 115,722,368)
sequence
gaattctactgtaactttaacattatagaatctgtacgtttagtcaaata
aagtccttcagatccatgatcacattacattctcaataataatcataata
ataaaaagctagatacatagggaatgagatctccttcttgaagaaggaag
aattctaaaatgacccctggtgattcaaggcctttcttaatccattcaac
tgcggtggggaagatctagactgtgatggggtaaacactatgctttgtga
ctagattttgatactgcacagttggctttgtgaaaggagcccatgcttgg
taagtctaagctcatcctgcagaagacactcaaagtgtgacagagaatta
aattaacatagatgaaaatcttgttggctgggcttgaagctggaggggct
atgtgctctgaaatgaatcagttgatagaagctgggccagggaatcctca
ggtagacagaaaggaagcttttgagtttaatttgccctattaatatgttt
tttaaaaattaaggttaataaacatttgtggttggagaagccataactgg
cttcacagttatgtgtgtgtctccacattcccctgtctacatcattcctt
tgtttctctcaataatgctctaaagtgcaaaacatgtgaatgagtgaatg
aatgaataaatgagtcttggggccggagagattgcttagtggttaatatg
tacctactgagagaacctgagtttgattcctaacatccatgtcaggtatc
ttgctactatctataactcccactttatgaggtctgatgccctcttctgg
cctctgtgatctcctgcattcatgtgcacatacccactctcagacataca
ttggcttcctacagctcttctagtggtgagaccatgtggcatttccccca
tctgcactgacatgtcaacctgtgtggtcatgatgcaagctttgcttggg
aatctacgctgttgagattttttagtgcctagagattttcccagtgatgg
atagaagaaaacagtctccagaacaggagtccttttcctcttgctctcta
tgattgttttgttccctttttctgaa
gaattcctgaccattcagtctggccactcagtgggctcagggtttagtga
tagaccttgtctcaagatgtaacatgaaaggccatattaaaagatatcca
gtataacccctggcttcacacacacacacacacacacgagagagagagag
agagagagagagagagagagagagagagagagagagagagagaaagagaa
agagagagagagaaggagagagagaaagacaaatacagagagtaagagac
aataacagagacagagtcagagacagagtcagagacagagagacagagag
acagagagacagagagatttctttttaggggtatactttttatatataat
tttctcaatcaggaagctctcatttttttataatgggttaagactctgag
aaatcactgaatatcttttgtattcattcattattatattctaataacct
caaatttttctatccaagctatttctgctaagcagcaaacctgctgctta
ttgaatcagcttcctcattaactcagccaagagtttccatagtcacttcc
atatcaacatctcattccatttgttattttctcctttaggggactaacct
tgattttatagtttaattagtgacattaacacctaccttgtcagctaatt
tcaacctcttggaggtacctgtacatttcctacctcattttatcaagacc
tattctacaccgttacatttgatggatcacaagactggtgcattctaacc
atttcctacttcattttatcaagacttattctacacccttacatttgatg
gatcacaagactggtgcattctaactctgtatagactcttaatttgtctc
ttcttttcattcacactgcaggtgcctaagtttgggtctctaccacttct
tgctggaccactcagtgaaattctaacagatccctgtgtcattagctctg
tccctttgtcacttttcttcactgtaatcctgaaaatgattatccagtca
tgtcattccaccttccattcactctggcttaagccttgactggaggttaa
agagagaagttcagaaattaaggaacacttggggccttggagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_115835630_115836702
seq2: B6Ng01-153N03.b_47_1122 (reverse)

seq1  TTCAGAAAAGGGGAACAAAACAATCAT-GAGAGCCAGAGGACAAGGACTC  49
      ||||||||| ||||||||||||||||| |||||| |||||| ||||||||
seq2  TTCAGAAAAAGGGAACAAAACAATCATAGAGAGCAAGAGGAAAAGGACTC  50

seq1  CTGTTCT-GAGACTG-TGTCTTCTATCCATCACT-GGAAAATCTCTAGGC  96
      ||||||| ||||||| | |||||||||||||||| |||||||||||||||
seq2  CTGTTCTGGAGACTGTTTTCTTCTATCCATCACTGGGAAAATCTCTAGGC  100

seq1  ACCTAGAAAATCTCAACAGCGTAGATTCCCAAGCAAAGCTTGCATCATGA  146
      | ||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  A-CTAAAAAATCTCAACAGCGTAGATTCCCAAGCAAAGCTTGCATCATGA  149

seq1  CCACACAGGTTGACATGTCAGTGCAGATGGGGGAAATGCCACATGGTCTC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACAGGTTGACATGTCAGTGCAGATGGGGGAAATGCCACATGGTCTC  199

seq1  ACCACTAGAAGAGCTGTAGGAAGCCAATGTATGTCTGAGAGTGGGTATGT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTAGAAGAGCTGTAGGAAGCCAATGTATGTCTGAGAGTGGGTATGT  249

seq1  GCACATGAATGCAGGAGATCACAGAGGCCAGAAGAGGGCATCAGACCTCA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGAATGCAGGAGATCACAGAGGCCAGAAGAGGGCATCAGACCTCA  299

seq1  TAAAGTGGGAGTTATAGATAGTAGCAAGATACCTGACATGGATGTTAGGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTGGGAGTTATAGATAGTAGCAAGATACCTGACATGGATGTTAGGA  349

seq1  ATCAAACTCAGGTTCTCTCAGTAGGTACATATTAACCACTAAGCAATCTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAACTCAGGTTCTCTCAGTAGGTACATATTAACCACTAAGCAATCTC  399

seq1  TCCGGCCCCAAGACTCATTTATTCATTCATTCACTCATTCACATGTTTTG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGCCCCAAGACTCATTTATTCATTCATTCACTCATTCACATGTTTTG  449

seq1  CACTTTAGAGCATTATTGAGAGAAACAAAGGAATGATGTAGACAGGGGAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTAGAGCATTATTGAGAGAAACAAAGGAATGATGTAGACAGGGGAA  499

seq1  TGTGGAGACACACACATAACTGTGAAGCCAGTTATGGCTTCTCCAACCAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGACACACACATAACTGTGAAGCCAGTTATGGCTTCTCCAACCAC  549

seq1  AAATGTTTATTAACCTTAATTTTTAAAAAACATATTAATAGGGCAAATTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTTATTAACCTTAATTTTTAAAAAACATATTAATAGGGCAAATTA  599

seq1  AACTCAAAAGCTTCCTTTCTGTCTACCTGAGGATTCCCTGGCCCAGCTTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAAAAGCTTCCTTTCTGTCTACCTGAGGATTCCCTGGCCCAGCTTC  649

seq1  TATCAACTGATTCATTTCAGAGCACATAGCCCCTCCAGCTTCAAGCCCAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAACTGATTCATTTCAGAGCACATAGCCCCTCCAGCTTCAAGCCCAG  699

seq1  CCAACAAGATTTTCATCTATGTTAATTTAATTCTCTGTCACACTTTGAGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAAGATTTTCATCTATGTTAATTTAATTCTCTGTCACACTTTGAGT  749

seq1  GTCTTCTGCAGGATGAGCTTAGACTTACCAAGCATGGGCTCCTTTCACAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTGCAGGATGAGCTTAGACTTACCAAGCATGGGCTCCTTTCACAA  799

seq1  AGCCAACTGTGCAGTATCAAAATCTAGTCACAAAGCATAGTGTTTACCCC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAACTGTGCAGTATCAAAATCTAGTCACAAAGCATAGTGTTTACCCC  849

seq1  ATCACAGTCTAGATCTTCCCCACCGCAGTTGAATGGATTAAGAAAGGCCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGTCTAGATCTTCCCCACCGCAGTTGAATGGATTAAGAAAGGCCT  899

seq1  TGAATCACCAGGGGTCATTTTAGAATTCTTCCTTCTTCAAGAAGGAGATC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCACCAGGGGTCATTTTAGAATTCTTCCTTCTTCAAGAAGGAGATC  949

seq1  TCATTCCCTATGTATCTAGCTTTTTATTATTATGATTATTATTGAGAATG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCCTATGTATCTAGCTTTTTATTATTATGATTATTATTGAGAATG  999

seq1  TAATGTGATCATGGATCTGAAGGACTTTATTTGACTAAACGTACAGATTC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTGATCATGGATCTGAAGGACTTTATTTGACTAAACGTACAGATTC  1049

seq1  TATAATGTTAAAGTTACAGTAGAATTC  1073
      |||||||||||||||||||||||||||
seq2  TATAATGTTAAAGTTACAGTAGAATTC  1076

seq1: chr8_115721272_115722368
seq2: B6Ng01-153N03.g_70_1163

seq1  GAATTCCTGACCATTCAGTCTGGCCACTCAGTGGGCTCAGGGTTTAGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGACCATTCAGTCTGGCCACTCAGTGGGCTCAGGGTTTAGTGA  50

seq1  TAGACCTTGTCTCAAGATGTAACATGAAAGGCCATATTAAAAGATATCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCTTGTCTCAAGATGTAACATGAAAGGCCATATTAAAAGATATCCA  100

seq1  GTATAACCCCTGGCTTCACACACACACACACACACACGAGAGAGAGAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAACCCCTGGCTTCACACACACACACACACACACGAGAGAGAGAGAG  150

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAA  200

seq1  AGAGAGAGAGAGAAGGAGAGAGAGAAAGACAAATACAGAGAGTAAGAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAAGGAGAGAGAGAAAGACAAATACAGAGAGTAAGAGAC  250

seq1  AATAACAGAGACAGAGTCAGAGACAGAGTCAGAGACAGAGAGACAGAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACAGAGACAGAGTCAGAGACAGAGTCAGAGACAGAGAGACAGAGAG  300

seq1  ACAGAGAGACAGAGAGATTTCTTTTTAGGGGTATACTTTTTATATATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAGACAGAGAGATTTCTTTTTAGGGGTATACTTTTTATATATAAT  350

seq1  TTTCTCAATCAGGAAGCTCTCATTTTTTTATAATGGGTTAAGACTCTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAATCAGGAAGCTCTCATTTTTTTATAATGGGTTAAGACTCTGAG  400

seq1  AAATCACTGAATATCTTTTGTATTCATTCATTATTATATTCTAATAACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACTGAATATCTTTTGTATTCATTCATTATTATATTCTAATAACCT  450

seq1  CAAATTTTTCTATCCAAGCTATTTCTGCTAAGCAGCAAACCTGCTGCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTTTCTATCCAAGCTATTTCTGCTAAGCAGCAAACCTGCTGCTTA  500

seq1  TTGAATCAGCTTCCTCATTAACTCAGCCAAGAGTTTCCATAGTCACTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATCAGCTTCCTCATTAACTCAGCCAAGAGTTTCCATAGTCACTTCC  550

seq1  ATATCAACATCTCATTCCATTTGTTATTTTCTCCTTTAGGGGACTAACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAACATCTCATTCCATTTGTTATTTTCTCCTTTAGGGGACTAACCT  600

seq1  TGATTTTATAGTTTAATTAGTGACATTAACACCTACCTTGTCAGCTAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTATAGTTTAATTAGTGACATTAACACCTACCTTGTCAGCTAATT  650

seq1  TCAACCTCTTGGAGGTACCTGTACATTTCCTACCTCATTTTATCAAGACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCTCTTGGAGGTACCTGTACATTTCCTACCTCATTTTATCAAGACC  700

seq1  TATTCTACACCGTTACATTTGATGGATCACAAGACTGGTGCATTCTAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTACACCGTTACATTTGATGGATCACAAGACTGGTGCATTCTAACC  750

seq1  ATTTCCTACTTCATTTTATCAAGACTTATTCTACACCCTTACATTTGATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTACTTCATTTTATCAAGACTTATTCTACACCCTTACATTTGATG  800

seq1  GATCACAAGACTGGTGCATTCTAACTCTGTATAGACTTCTTAATTTGTCT  850
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GATCACAAGACTGGTGCATTCTAACTCTGTATAGAC-TCTTAATTTGTCT  849

seq1  CTTCTTTTCCATTCACACTGCAGGTGCCTAAGTCTGGGTCTCTACCACTT  900
      |||||||| |||||||||||||||||||||||| ||||||||||||||||
seq2  CTTCTTTT-CATTCACACTGCAGGTGCCTAAGTTTGGGTCTCTACCACTT  898

seq1  CTTGCCTGGACCACTCAGTGAAATTCTAACAGATCCCTGTGTCATTAGCT  950
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTG-CTGGACCACTCAGTGAAATTCTAACAGATCCCTGTGTCATTAGCT  947

seq1  CTGTCCCTTTGTCACTTTTCTTCACTGTAATCCTGGAAAATGATTATCCA  1000
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTGTCCCTTTGTCACTTTTCTTCACTGTAATCCT-GAAAATGATTATCCA  996

seq1  GTCATGTCATTCCACCTT-CATTCACTCTGGGCTTAAAAGGCTTTGACT-  1048
      |||||||||||||||||| |||||||||| |||||||   || |||||| 
seq2  GTCATGTCATTCCACCTTCCATTCACTCT-GGCTTAA---GCCTTGACTG  1042

seq1  GAGGTTAAAGAGAG-AGTTCAGTAATTAAGGAGCACTTGTG--CTTGGAG  1095
      |||||||||||||| ||||||| ||||||||| |||||| |  |||||||
seq2  GAGGTTAAAGAGAGAAGTTCAGAAATTAAGGAACACTTGGGGCCTTGGAG  1092

seq1  AA  1097
      ||
seq2  AA  1094