BAC Information

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BAC

Clone NameB6Ng01-155E22
Chromosome8 (Build37)
Map Location 123,230,798 - 123,382,257
singlet/doubletdoublet
Overlap geneIrf8
Upstream geneAtp2c2, 4632415K11Rik, Cotl1, BC025816, Usp10, Crispld2, Zdhhc7, 6430548M08Rik, 1700120B06Rik, Gse1, 4833427B12Rik, LOC668301, 1190005I06Rik, Cox4nb, Cox4i1
Downstream geneLOC100042333, Foxf1a, Mthfsd, Foxc2, Foxl1, 1700018B08Rik, Fbxo31, Map1lc3b, Zcchc14, Jph3, Klhdc4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155E22.bB6Ng01-155E22.g
ACCDH950128DH950129
length1,096897
definitionDH950128|Mus musculus domesticus DNA, BAC clone: B6Ng01-155E22, 5' end.DH950129|Mus musculus domesticus DNA, BAC clone: B6Ng01-155E22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(123,230,798 - 123,231,914)(123,381,360 - 123,382,257)
sequence
gaattcttacactttagccttccaagcctctggagacctaagcaagcagc
tccctctccccacatcaggttttgatgcttaaattggaattgatcttgtc
ttcatttaagagcgagtttcacaactgggtttttttttttagattagaat
tttatttaaaaatataagtttgtatttcatattcaacatatattttcgat
agacataaatataagcatttcagtttatataatattgtttgtatgtatat
atttttttcatttttaattcccagatttactttttttttatttatttttt
taattaagtattttcttcatttacatttccaatgctatcccaaaagtccc
ccagaccctccccccacacacccttacccacccactcccagttcttggcc
ctggtgttcccctgtactgaggcatataaagtttgcaagaccaaggggcc
tgtctttccactgatggccgactaggccatcttctgatacatatgcagct
agagacacgagctccaggggtactggttagttcatattgttgttccacct
atagggttgcagatcccttcagctccttggatattttctctagctcctcc
attgggggccctgtgttccatccaatagctgactgtgagcatccacttct
gtgtttgctaggccccggcatagcctcacaagagacagctatatcagggt
cctttcagcacaatcttgctggtgtatgtaatggtgtcagcgtttgtcac
aactatgttaaaccctgagaacacaagccatccagtgggctagcaagttt
gttcctagcagttccaaggggccgtgaagatgtcctaaggggattcctgc
tgggcagggaagttttgttaggtcacccctgggccctttcactgaggttc
tatgacttcatgaccttgattctcccagaccacttcttggtttcttcaga
ctcccatgacggacccctgtcccactctcccatgtttctgtgagtttcac
atgagctagccctgaatgtccaggcatcattcagctgtcttactgaggca
tcacctggcagtcccacagtgctaggtggtgcaaactggaggctga
gaattcatgcaggctctacctctaactgagatgatccctcaagccagctc
cttaggatcaccaggaagaagaggatgagaggggatggtaaagaacccag
gaacaccgtctcagccaggcaaagaggaggcataagggaggttggagtcg
tgctggagactggcaaaacttttggcctgatggagtggttcacccttcat
cttccccagaaagcaagtccattctaactgtgaaaaagacaccagatgaa
tccaaacaagaaatcttctagcaaaatcatgaaactcataaaactaagat
gcttcaaaaaacaaccccagccataagagatctcagaaggctcaatggct
aacatggaacccgaggagaaaggggagccaaccctaggatggcgctggct
gttgggttcttggtgacatcagctactacagctgatggccttctcctcgg
cttcctctgctcttgtacatgaagggcactcactgccaccatcccagaac
tgaacagatttccagggcagtccactgcggctcccagcaacctggtcctg
tgtggagtcggggggtgtggggtgccccagagaaaaccctgattttgcag
aagatgctcagtcaatgaacagctgcctcccgccactcttgccctgcggc
agagcagacagacgcaatgctaagtgcccccaaccgcatgcaaggaaggt
tcccggaagaaaagagcgccagcggtccacagccacgagcctggcccagc
cacatgggaaattccaggacagacactggttaagctgcttttagttttgg
ctttgaactcacagagctccaggctaaagagaatgtcaggaccgagttcc
gcctgtggaacctctttggggcatcgaaggctgtggctctgtttcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_123230798_123231914
seq2: B6Ng01-155E22.b_44_1139

seq1  GAATTCTTACACTTTAGCCTTCCAAGCCTCTGGAGACCTAAGCAAGCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACACTTTAGCCTTCCAAGCCTCTGGAGACCTAAGCAAGCAGC  50

seq1  TCCCTCTCCCCACATCAGGTTTTGATGCTTAAATTGGAATTGATCTTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTCCCCACATCAGGTTTTGATGCTTAAATTGGAATTGATCTTGTC  100

seq1  TTCATTTAAGAGCGAGTTTCACAACTGGGTTTTTTTTTTTAGATTAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTAAGAGCGAGTTTCACAACTGGGTTTTTTTTTTTAGATTAGAAT  150

seq1  TTTATTTAAAAATATAAGTTTGTATTTCATATTCAACATATATTTTCGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTAAAAATATAAGTTTGTATTTCATATTCAACATATATTTTCGAT  200

seq1  AGACATAAATATAAGCATTTCAGTTTATATAATATTGTTTGTATGTATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATAAATATAAGCATTTCAGTTTATATAATATTGTTTGTATGTATAT  250

seq1  ATTTTTTTCATTTTTAATTCCCAGATTTACTTTTTTTTTATTTATTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTCATTTTTAATTCCCAGATTTACTTTTTTTTTATTTATTTTTT  300

seq1  TAATTAAGTATTTTCTTCATTTACATTTCCAATGCTATCCCAAAAGTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAGTATTTTCTTCATTTACATTTCCAATGCTATCCCAAAAGTCCC  350

seq1  CCAGACCCTCCCCCCACACACCCTTACCCACCCACTCCCAGTTCTTGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACCCTCCCCCCACACACCCTTACCCACCCACTCCCAGTTCTTGGCC  400

seq1  CTGGTGTTCCCCTGTACTGAGGCATATAAAGTTTGCAAGACCAAGGGGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTTCCCCTGTACTGAGGCATATAAAGTTTGCAAGACCAAGGGGCC  450

seq1  TGTCTTTCCACTGATGGCCGACTAGGCCATCTTCTGATACATATGCAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTCCACTGATGGCCGACTAGGCCATCTTCTGATACATATGCAGCT  500

seq1  AGAGACACGAGCTCCAGGGGTACTGGTTAGTTCATATTGTTGTTCCACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACGAGCTCCAGGGGTACTGGTTAGTTCATATTGTTGTTCCACCT  550

seq1  ATAGGGTTGCAGATCCCTTCAGCTCCTTGGATATTTTCTCTAGCTCCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGTTGCAGATCCCTTCAGCTCCTTGGATATTTTCTCTAGCTCCTCC  600

seq1  ATTGGGGGCCCTGTGTTCCATCCAATAGCTGACTGTGAGCATCCACTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGGGCCCTGTGTTCCATCCAATAGCTGACTGTGAGCATCCACTTCT  650

seq1  GTGTTTGCTAGGCCCCGGCATAGCCTCACAAGAGACAGCTATATCAGGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTGCTAGGCCCCGGCATAGCCTCACAAGAGACAGCTATATCAGGGT  700

seq1  CCTTTCAGCACAATCTTGCTGGTGTATGTAATGGTGTCAGCGTTTGTCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCAGCACAATCTTGCTGGTGTATGTAATGGTGTCAGCGTTTGTCAC  750

seq1  AACTATGTTAAACCCTGAGAACACAAGCCATCCAGTGGGCTAGCAAGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATGTTAAACCCTGAGAACACAAGCCATCCAGTGGGCTAGCAAGTTT  800

seq1  GTTCCTAGCAGTTCCAAGGGGCCGTGAAGATGTCCTAAGGGGATTCCTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTAGCAGTTCCAAGGGGCCGTGAAGATGTCCTAAGGGGATTCCTGC  850

seq1  TGGGCAGGGAAGTTTTGTTAGGTCACCCCTGGGCCCTTTCCACTGAGGTT  900
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGGGCAGGGAAGTTTTGTTAGGTCACCCCTGGGCCCTTT-CACTGAGGTT  899

seq1  CTATGACTTCATGACCTTGATTCTCCCAGAACCACTTCTTGGTTTCTTCA  950
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTATGACTTCATGACCTTGATTCTCCCAG-ACCACTTCTTGGTTTCTTCA  948

seq1  GACTCCCATGACGGAACCCCTGTCCCACTCTCCCCATGTTTCTGTTGAAG  1000
      |||||||||||||| |||||||||||||||| |||||||||||||   ||
seq2  GACTCCCATGACGG-ACCCCTGTCCCACTCT-CCCATGTTTCTGT--GAG  994

seq1  TTTCAACATGAAGCTAGCCCTGGAATGTCCCAGGCATTCATTCAGCTTGT  1050
      |||| ||||| |||||||||| |||||| ||||||| ||||||||| |||
seq2  TTTC-ACATG-AGCTAGCCCT-GAATGT-CCAGGCA-TCATTCAGC-TGT  1038

seq1  CTTTACTGAGGGCCATCCACCTGGCCAAGGCCACACAGTGGCTAGGTGGT  1100
      | |||||||||  ||| ||||||||  || || |||||| ||||||||||
seq2  C-TTACTGAGG--CAT-CACCTGGC--AGTCC-CACAGT-GCTAGGTGGT  1080

seq1  GCAGAACTGGAGGCTGA  1117
      ||| |||||||||||||
seq2  GCA-AACTGGAGGCTGA  1096

seq1: chr8_123381360_123382257
seq2: B6Ng01-155E22.g_67_963 (reverse)

seq1  CTGGAACAGAGCCACAGCCTCTGATTGCCCCAGAGAGGTTCCACAGGCGG  50
      ||| ||||||||||||||||  || ||||||| |||||||||||||||||
seq2  CTGAAACAGAGCCACAGCCTTCGA-TGCCCCAAAGAGGTTCCACAGGCGG  49

seq1  GACTCGGT-CTGACATTCTCTTTAGCCTGGAGCTCTGTGAGTTCAAAGCC  99
       ||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AACTCGGTCCTGACATTCTCTTTAGCCTGGAGCTCTGTGAGTTCAAAGCC  99

seq1  AAAACTAAAAGCAGCTTAACCAGTGTCTGTCCTGGAATTTCCCATGTGGC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTAAAAGCAGCTTAACCAGTGTCTGTCCTGGAATTTCCCATGTGGC  149

seq1  TGGGCCAGGCTCGTGGCTGTGGACCGCTGGCGCTCTTTTCTTCCGGGAAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCAGGCTCGTGGCTGTGGACCGCTGGCGCTCTTTTCTTCCGGGAAC  199

seq1  CTTCCCTTGCATGCGGTTGGGGGCACTTAGCATTGCGTCTGTCTGCTCTG  249
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTT-CCTTGCATGCGGTTGGGGGCACTTAGCATTGCGTCTGTCTGCTCTG  248

seq1  CCGCAGGGCAAGAGTGGCGGGAGGCAGCTGTTCATTGACTGAGCATCTTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCAGGGCAAGAGTGGCGGGAGGCAGCTGTTCATTGACTGAGCATCTTC  298

seq1  TGCAAAATCAGGGTTTTCTCTGGGGCACCCCACACCCCCCGACTCCACAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAATCAGGGTTTTCTCTGGGGCACCCCACACCCCCCGACTCCACAC  348

seq1  AGGACCAGGTTGCTGGGAGCCGCAGTGGACTGCCCTGGAAATCTGTTCAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCAGGTTGCTGGGAGCCGCAGTGGACTGCCCTGGAAATCTGTTCAG  398

seq1  TTCTGGGATGGTGGCAGTGAGTGCCCTTCATGTACAAGAGCAGAGGAAGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGATGGTGGCAGTGAGTGCCCTTCATGTACAAGAGCAGAGGAAGC  448

seq1  CGAGGAGAAGGCCATCAGCTGTAGTAGCTGATGTCACCAAGAACCCAACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGAGAAGGCCATCAGCTGTAGTAGCTGATGTCACCAAGAACCCAACA  498

seq1  GCCAGCGCCATCCTAGGGTTGGCTCCCCTTTCTCCTCGGGTTCCATGTTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCGCCATCCTAGGGTTGGCTCCCCTTTCTCCTCGGGTTCCATGTTA  548

seq1  GCCATTGAGCCTTCTGAGATCTCTTATGGCTGGGGTTGTTTTTTGAAGCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTGAGCCTTCTGAGATCTCTTATGGCTGGGGTTGTTTTTTGAAGCA  598

seq1  TCTTAGTTTTATGAGTTTCATGATTTTGCTAGAAGATTTCTTGTTTGGAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGTTTTATGAGTTTCATGATTTTGCTAGAAGATTTCTTGTTTGGAT  648

seq1  TCATCTGGTGTCTTTTTCACAGTTAGAATGGACTTGCTTTCTGGGGAAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGGTGTCTTTTTCACAGTTAGAATGGACTTGCTTTCTGGGGAAGA  698

seq1  TGAAGGGTGAACCACTCCATCAGGCCAAAAGTTTTGCCAGTCTCCAGCAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGGTGAACCACTCCATCAGGCCAAAAGTTTTGCCAGTCTCCAGCAC  748

seq1  GACTCCAACCTCCCTTATGCCTCCTCTTTGCCTGGCTGAGACGGTGTTCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCAACCTCCCTTATGCCTCCTCTTTGCCTGGCTGAGACGGTGTTCC  798

seq1  TGGGTTCTTTACCATCCCCTCTCATCCTCTTCTTCCTGGTGATCCTAAGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCTTTACCATCCCCTCTCATCCTCTTCTTCCTGGTGATCCTAAGG  848

seq1  AGCTGGCTTGAGGGATCATCTCAGTTAGAGGTAGAGCCTGCATGAATTC  898
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGCTTGAGGGATCATCTCAGTTAGAGGTAGAGCCTGCATGAATTC  897