BAC Information

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BAC

Clone NameB6Ng01-155F16
Chromosome8 (Build37)
Map Location 61,232,575 - 61,233,670
singlet/doubletsinglet
Overlap gene4930431L04Rik
Upstream geneLOC100040711
Downstream geneBC030500, LOC665116, LOC436042
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155F16.bB6Ng01-155F16.g
ACCDH950161DH950162
length1,2251,076
definitionDH950161|Mus musculus domesticus DNA, BAC clone: B6Ng01-155F16, 5' end.DH950162|Mus musculus domesticus DNA, BAC clone: B6Ng01-155F16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttaaagagggaacacaaatatcccttaaagaattacaggaaaa
cacaaccaaacaggtcaaggaattgatcaaaactatccaagatctaataa
tggaagtataaacaatgaagaaaacccaaagggagacaattctggagata
gaaattctaggaaataaatcaggacccatagatgtgagcatcaccaacaa
aatgcaagagatggaagagagaatctcagctgtagaagattccatagaaa
acatggacacaacaatcaaaaaaatgcaaaatgcaaaaagatcctgattc
aaaatatccaggaaatccaggacacaatgagaagaccaaccttaaggata
ataggtatagaagagagtgaagattcccaacttaaagggccagtaaatat
cttcaacaaaattatagaagaaaatttccctaacctaaagtaagagatgc
ccatgaacatacaagaaacctacagagctccaaatagactggaccagaaa
aaaaatcctcccaacacataataatcagaacaacaaatgcactaaataaa
gatagaattttaaaagcagtaaggggaaaatgtgaagtaacatataaagg
cagacctattagaattacaccagacttctctccagagactatgaaagcca
gaagatcctggacagatgttgtacaggccctaagagaacacaaagaccag
cccaggctactatacccagcaaaactctcaattaccatagatggagaaac
caaagtattccatgacaaaaccaaattcacacaatatctttacatgaatc
cagcccctcaaaagataataaagggaaaactcaaaaacaaggagtgaaac
tacatgctagaaaaggcaagaaaagaatccttcaacaaacctaaaagaag
atagctacagaacagaatcacaactctaacacaaaaataacaaaaagcaa
caatgacttttcctaaatatctcttaatatcaatggactcaactctccat
aaaaagaagacaaactaacagactggctacttaaagagactcatatttgc
tgcatacaggaaatccacctcaggacaagaagacactacatcagaggtga
aagctgaagaatttcagtaaatggtccaaagaaacaagctgagtagcatc
tatatcggataatcgacttccacctaagtttccaaaagaacaaggagggg
catttcaatcctctctccgagggag
gaattcattttctcagctatgtcttttgttttttttctgggagtgggagg
caagtgtgtgtcatctaggatggttcagccacgttgctataggtccccta
tgtcacctatctgtgggcatcagcctttcatcatgttctcttatcctcca
ggagggtagaggttaagatatactgataaaaggactctcagcagaaaaag
aaatgtgacgttttaaaaacttcttcttgtgctatgcttaaagttcattg
cttaaaagtattcacaggtctaagttcaagagaacattttggttcactgt
ataaaattattcacatgagatttataaacaagtattacttgtaccacatg
ggattttgtgataaatatattcctcaaatatatgtatccacatttagtat
gtaaatagtttgagttataactacttgttaggttgaattatattgtacat
tattttataatatttaatatgtagttgttccatgattaaattttattata
aaaatattagctaactagttatgcttgtgaatccctttatatataatata
cctttcttagctctgaatgtttgttgtccaaaaattatatgttcaaattg
agttatcttccagaaaatttaaaactatacttttagattctattatttta
ctatatctgattctattaacctctatactttgaagttttcaatgtttgta
acattttgacttgcaaagaatgctggtatgttctctgtaaattcattaaa
acttttttgtttcttcattatggaggattgaaacagttccagacaccatt
acctgggaaaccaggcccgccattgctgctgaaggcgaccatttattaca
cacacttcatttgagtctcttattaatgctgacatctgttcaggctttaa
ttaccacattaccacactggtcccttgtcacacttccctcatctgctgta
gcatgacacaaaggagaaagtcatctctcacagatgaggtcttagtaaga
catccatttgatgaatttcattgctatggtggacatatattgcctcaatt
tcatttctttctgttaacaggaaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_61232575_61233670
seq2: B6Ng01-155F16.g_69_1144 (reverse)

seq1  TGTTTCTTGTTAAACAGAAAGAAATGAAATTTAGAAGCAAATATATGTCC  50
      |||||| |||| |||||||||||||||||||  || || |||||||||||
seq2  TGTTTCCTGTT-AACAGAAAGAAATGAAATT--GAGGC-AATATATGTCC  46

seq1  CACCCATAGCAAATGAAATTCATTCCAAATGGATGTCCTTACTAAAGAAC  100
         ||||||| ||||||||||||  ||||||||||| ||||||||   ||
seq2  --ACCATAGC-AATGAAATTCAT--CAAATGGATGT-CTTACTAA--GAC  88

seq1  CTCATCCTGGTGAGAGAATGTACTTTCTCCCTTTGTGTTCATGCTACAGC  150
      ||||||   ||||||| ||| ||||||| |||||||| ||||||||||||
seq2  CTCATC--TGTGAGAG-ATG-ACTTTCT-CCTTTGTG-TCATGCTACAGC  132

seq1  AGATGAGGGGAAGTGTGACAAGGGACCAGTTGTGGTAATGTGGTAATTAA  200
      |||||| |||||||||||||||||||||| ||||||||||||||||||||
seq2  AGATGA-GGGAAGTGTGACAAGGGACCAG-TGTGGTAATGTGGTAATTAA  180

seq1  AGCCTGAACAGATGTCAGCATTAATAAGAGACTCAAATGAAGTGTGTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGAACAGATGTCAGCATTAATAAGAGACTCAAATGAAGTGTGTGTA  230

seq1  ATAAATGGTCGCCTTCAGCAGCAATGGCGGGCCTGGTTTCCCAGGTAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGGTCGCCTTCAGCAGCAATGGCGGGCCTGGTTTCCCAGGTAATG  280

seq1  GTGTCTGGAACTGTTTCAATCCTCCATAATGAAGAAACAAAAAAGTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGGAACTGTTTCAATCCTCCATAATGAAGAAACAAAAAAGTTTTA  330

seq1  ATGAATTTACAGAGAACATACCAGCATTCTTTGCAAGTCAAAATGTTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTTACAGAGAACATACCAGCATTCTTTGCAAGTCAAAATGTTACA  380

seq1  AACATTGAAAACTTCAAAGTATAGAGGTTAATAGAATCAGATATAGTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGAAAACTTCAAAGTATAGAGGTTAATAGAATCAGATATAGTAAA  430

seq1  ATAATAGAATCTAAAAGTATAGTTTTAAATTTTCTGGAAGATAACTCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAGAATCTAAAAGTATAGTTTTAAATTTTCTGGAAGATAACTCAAT  480

seq1  TTGAACATATAATTTTTGGACAACAAACATTCAGAGCTAAGAAAGGTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACATATAATTTTTGGACAACAAACATTCAGAGCTAAGAAAGGTATA  530

seq1  TTATATATAAAGGGATTCACAAGCATAACTAGTTAGCTAATATTTTTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATATAAAGGGATTCACAAGCATAACTAGTTAGCTAATATTTTTATA  580

seq1  ATAAAATTTAATCATGGAACAACTACATATTAAATATTATAAAATAATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATTTAATCATGGAACAACTACATATTAAATATTATAAAATAATGT  630

seq1  ACAATATAATTCAACCTAACAAGTAGTTATAACTCAAACTATTTACATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATAATTCAACCTAACAAGTAGTTATAACTCAAACTATTTACATAC  680

seq1  TAAATGTGGATACATATATTTGAGGAATATATTTATCACAAAATCCCATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTGGATACATATATTTGAGGAATATATTTATCACAAAATCCCATG  730

seq1  TGGTACAAGTAATACTTGTTTATAAATCTCATGTGAATAATTTTATACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACAAGTAATACTTGTTTATAAATCTCATGTGAATAATTTTATACAG  780

seq1  TGAACCAAAATGTTCTCTTGAACTTAGACCTGTGAATACTTTTAAGCAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCAAAATGTTCTCTTGAACTTAGACCTGTGAATACTTTTAAGCAAT  830

seq1  GAACTTTAAGCATAGCACAAGAAGAAGTTTTTAAAACGTCACATTTCTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTAAGCATAGCACAAGAAGAAGTTTTTAAAACGTCACATTTCTTT  880

seq1  TTCTGCTGAGAGTCCTTTTATCAGTATATCTTAACCTCTACCCTCCTGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTGAGAGTCCTTTTATCAGTATATCTTAACCTCTACCCTCCTGGA  930

seq1  GGATAAGAGAACATGATGAAAGGCTGATGCCCACAGATAGGTGACATAGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAGAGAACATGATGAAAGGCTGATGCCCACAGATAGGTGACATAGG  980

seq1  GGACCTATAGCAACGTGGCTGAACCATCCTAGATGACACACACTTGCCTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTATAGCAACGTGGCTGAACCATCCTAGATGACACACACTTGCCTC  1030

seq1  CCACTCCCAGAAAAAAAACAAAAGACATAGCTGAGAAAATGAATTC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCCCAGAAAAAAAACAAAAGACATAGCTGAGAAAATGAATTC  1076