BAC Information

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BAC

Clone NameB6Ng01-155J20
Chromosome8 (Build37)
Map Location 44,388,965 - 44,539,386
singlet/doubletdoublet
Overlap geneZfp42
Upstream geneLOC628212, Triml1, LOC622082, EG622117, LOC100039417
Downstream geneAdam26b, Adam26a, EG384813, Adam34, EG384814, LOC100039472, LOC547011, LOC622263
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155J20.bB6Ng01-155J20.g
ACCDH950348DH950349
length1,1541,120
definitionDH950348|Mus musculus domesticus DNA, BAC clone: B6Ng01-155J20, 5' end.DH950349|Mus musculus domesticus DNA, BAC clone: B6Ng01-155J20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,388,965 - 44,390,137)(44,538,251 - 44,539,386)
sequence
gaattctggcaataaagcctcatgcacacagtcctcagctctgcatttga
ggtgtttaagaaacaaccaaaccacaaacaaacatgaaggacaccaacct
caataactgaggtggttggtcagcaccgcaagatggctcaggagaaagtc
gcctgctgctgccacacctaaggacactcccagtgacacgtggtagaaag
cgtagactcagattccacttgaatccacacacacaataaatagtaaaata
taaaaatcaaaacaaagaaacttccaaaagagacactgaaaatgttcctt
tggggcctggagagatggctcagcggttaagagcactgactgctcttcca
gaggacatgagttcaaatcctagcaaccacatggtggctcacaaccatcg
ggtaatgagatctgataccctcttcttgtgtgtctgaagacagctacagt
gtgcttagatacgataataaataaatcatatgtcttgggacatatattaa
aaaaaaaaagaaaagaaaagaaaatgttactttgtagctagcttgtgggg
gtcctggagtggttattccccacttataacccgagcatagacagcaggca
cgctcccagcatttgcaacccctcctagatagagtaaggcaccctactag
tccttgcatgttcttctctatcactaatacaccaccgacagttttctgtc
actgttagtacgcacaaacatatatacttcagatctgtgcttggacatca
cttcctcagagtttccctccatacttaggatcccatgctaaatattcccc
agcctgcgttacacagaagagcacaattcttggtatttattgcctatgaa
accgtttactcttacctgctggctgcactgcacactcactctattgagag
aagaagactatcttcttttgccacgtgtcccagctcttagtccatttctc
tagtgaatgaggtcatgaatatgcattagtatagttttggttgagacctg
atcagaaatctcaaataacataacttaccaggcatttataaagaacttag
aaacttggttaaaaagaacaataaaaaaggagttgcttgcaatgctatgt
agggtgaatgtaatttcctaacatcaagcatagaaattagcatttacttt
cttc
gaattcaatcctaagatgaccctccagactctctttcacgctctctctct
ccaaaatgaaatggcattgcttaatatgttcgtttaagattgggtgaata
gaaaaattacttcctttcaaactatctttctccaaaatgaaacgggcact
gtttaagatgttccatttagttctgcctttttactaagaattgggtgaat
tggaagattgaaaaggaatgtcaatctacctcaatccagaaggggaaaaa
aaaaatcctcttacgcattgcacaaaattagtgccttccagaacgaataa
cttcagtggggtgatgttcttacaagaaaaattaaggtgcttccaggtac
tctgcttagatctttagctaatggggcagatcaatcagaaggataatgat
ttggtagatattttgttgttttatttttaatgaatatgagacacttgtat
tcattaaaattagaaagatgataaataatgaatcacctcaaattacaaaa
tttccatatttcttaagaaactgacactgtgtctgccaataatagccaca
tctaatatttatgaaaagctggctttctgtaatgagaaattcaacaatta
ccatggtaataacttgggcagcaaggatgaaatatatggtaataaaagtg
aggctcaagtggagaaactgcacgagcctctgaggtctcggacccaggca
tgcttccaaggtctgaagtatgaagagtgcctgtccatctgcaatcattc
aaaaacttgagtgccttgccttctacagagcaacatccattatttgtctt
ccatgaggtttcataattcttcacagtattcaatgaatgatttctcagtt
tatatcctctcttcccctgtaatagccttttctctctttcctttgtaagt
cctattttctttcactttgtggggatttttccatatttattttctgatta
ttttcatgagtttctttcctttgactagtcaatggccaaaatgattcaca
cccggtggcttctatacactgatcaggagtcagatctaaagacttttggg
agcattttagtctgttttaacatccttgttgccataatacctctccttac
ttctttgaaaccctgaggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_44388965_44390137
seq2: B6Ng01-155J20.b_45_1198

seq1  GAATTCTGGCAATAAAGCCTCATGCACACAGTCCTCAGCTCTGCATTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGCAATAAAGCCTCATGCACACAGTCCTCAGCTCTGCATTTGA  50

seq1  GGTGTTTAAGAAACAACCAAACCACAAACAAACATGAAGGACACCAACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTAAGAAACAACCAAACCACAAACAAACATGAAGGACACCAACCT  100

seq1  CAATAACTGAGGTGGTTGGTCAGCACCGCAAGATGGCTCAGGAGAAAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAACTGAGGTGGTTGGTCAGCACCGCAAGATGGCTCAGGAGAAAGTC  150

seq1  GCCTGCTGCTGCCACACCTAAGGACACTCCCAGTGACACGTGGTAGAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCTGCTGCCACACCTAAGGACACTCCCAGTGACACGTGGTAGAAAG  200

seq1  CGTAGACTCAGATTCCACTTGAATCCACACACACAATAAATAGTAAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGACTCAGATTCCACTTGAATCCACACACACAATAAATAGTAAAATA  250

seq1  TAAAAATCAAAACAAAGAAACTTCCAAAAGAGACACTGAAAATGTTCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATCAAAACAAAGAAACTTCCAAAAGAGACACTGAAAATGTTCCTT  300

seq1  TGGGGCCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCA  350

seq1  GAGGACATGAGTTCAAATCCTAGCAACCACATGGTGGCTCACAACCATCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACATGAGTTCAAATCCTAGCAACCACATGGTGGCTCACAACCATCG  400

seq1  GGTAATGAGATCTGATACCCTCTTCTTGTGTGTCTGAAGACAGCTACAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATGAGATCTGATACCCTCTTCTTGTGTGTCTGAAGACAGCTACAGT  450

seq1  GTGCTTAGATACGATAATAAATAAATCATATGTCTTGGGACATATATTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTAGATACGATAATAAATAAATCATATGTCTTGGGACATATATTAA  500

seq1  AAAAAAAAAGAAAAGAAAAGAAAATGTTACTTTGTAGCTAGCTTGTGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAGAAAAGAAAAGAAAATGTTACTTTGTAGCTAGCTTGTGGGG  550

seq1  GTCCTGGAGTGGTTATTCCCCACTTATAACCCGAGCATAGACAGCAGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGGAGTGGTTATTCCCCACTTATAACCCGAGCATAGACAGCAGGCA  600

seq1  CGCTCCCAGCATTTGCAACCCCTCCTAGATAGAGTAAGGCACCCTACTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCCCAGCATTTGCAACCCCTCCTAGATAGAGTAAGGCACCCTACTAG  650

seq1  TCCTTGCATGTTCTTCTCTATCACTAATACACCACCGACAGTTTTCTGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGCATGTTCTTCTCTATCACTAATACACCACCGACAGTTTTCTGTC  700

seq1  ACTGTTAGTACGCACAAACATATATACTTCAGATCTGTGCTTGGACATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTAGTACGCACAAACATATATACTTCAGATCTGTGCTTGGACATCA  750

seq1  CTTCCTCAGAGTTTCCCTCCATACTTAGGATCCCATGCTAAATATTCCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCAGAGTTTCCCTCCATACTTAGGATCCCATGCTAAATATTCCCC  800

seq1  AGCCTGCGTTACACAGAAGAGCACAATTCTTGGTATTTATTGCCTATGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCGTTACACAGAAGAGCACAATTCTTGGTATTTATTGCCTATGAA  850

seq1  ACCGTTTACTCTTACCTGCTGGCTGCACTGCACACTCACTCTATTGAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTTTACTCTTACCTGCTGGCTGCACTGCACACTCACTCTATTGAGAG  900

seq1  AAGAAGACTATCTTCTTTTGCCACGTGTCCCAGCTCTTAGTCCATTTCTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGACTATCTTCTTTTGCCACGTGTCCCAGCTCTTAGTCCATTTCTC  950

seq1  TAGTGAAATGAGGTCATGAATATGCATTAGTTATAGTTTTGGTTGAGACC  1000
      ||||| |||||||||||||||||||||||| |||||||||||||||||||
seq2  TAGTG-AATGAGGTCATGAATATGCATTAG-TATAGTTTTGGTTGAGACC  998

seq1  TGATTCAGAAATCTCAAATAACAATAACTTACCAGGCATTTATACAGAAC  1050
      ||| |||||||||||||||||| ||||||||||||||||||||| |||||
seq2  TGA-TCAGAAATCTCAAATAAC-ATAACTTACCAGGCATTTATAAAGAAC  1046

seq1  TTTAGACACTTGGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGTTGC  1100
       ||||| ||||||||         ||||| || || |||||| |||||||
seq2  -TTAGAAACTTGGTT---------AAAAAGAACAATAAAAAAGGAGTTGC  1086

seq1  TTGCAAATGCTATGTAGGTAGAATGGTATTTCCTAACCAATCAAAGCCAT  1150
      |||| |||||||||||||  |||||  ||||||||||  |||||   |||
seq2  TTGC-AATGCTATGTAGGGTGAATGTAATTTCCTAAC--ATCAA--GCAT  1131

seq1  AGAAA-TAGCATTTACTTTTCTTC  1173
      ||||| |||||||||| |||||||
seq2  AGAAATTAGCATTTAC-TTTCTTC  1154

seq1: chr8_44538251_44539386
seq2: B6Ng01-155J20.g_67_1186 (reverse)

seq1  AACCTCAGAGTTTCAAAAGAAAGTAA-GAGAAGTAATTATATGCAAAACA  49
      |||||||| ||||||||   |||||| |||| || |||||  |||| | |
seq2  AACCTCAGGGTTTCAAA--GAAGTAAGGAGAGGT-ATTAT-GGCAACA-A  45

seq1  AGATGTTAAAAACACAGACTAAAAATGCTTCCAAGATGTCTTTAGGATCT  99
       |||||||||   ||||||| |||||||| |||| | ||||||| |||||
seq2  GGATGTTAAA---ACAGACT-AAAATGCTCCCAA-AAGTCTTTA-GATCT  89

seq1  GACTCCTGATTCAGTTGTATTAGAAGCCA-CGGGTGTGAATCATTTTGCC  148
      ||||||||| |||| |||| ||||||||| |||||||||||||||||| |
seq2  GACTCCTGA-TCAG-TGTA-TAGAAGCCACCGGGTGTGAATCATTTTGGC  136

seq1  ATTTGACTAGTTCAAAGGAAAGAAACTCATTGAAAAATAATTCAGAAAAT  198
        |||||||| |||||||||||||||||||   ||||||| |||||||||
seq2  CATTGACTAG-TCAAAGGAAAGAAACTCAT--GAAAATAA-TCAGAAAAT  182

seq1  AAATATGGAAAAATCCACACAAAGTGAAAGAAAATAGGACTTACAAAGGA  248
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAATATGGAAAAATCCCCACAAAGTGAAAGAAAATAGGACTTACAAAGGA  232

seq1  AAGAGAGAAAAGGCTATTACAGGGGAAGAGAGGATATAAACTGAGAAATC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGAAAAGGCTATTACAGGGGAAGAGAGGATATAAACTGAGAAATC  282

seq1  ATTCATTGAATACTGTGAAGAATTATGAAACCTCATGGAAGACAAATAAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTGAATACTGTGAAGAATTATGAAACCTCATGGAAGACAAATAAT  332

seq1  GGATGTTGCTCTGTAGAAGGCAAGGCACTCAAGTTTTTGAATGATTGCAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTTGCTCTGTAGAAGGCAAGGCACTCAAGTTTTTGAATGATTGCAG  382

seq1  ATGGACAGGCACTCTTCATACTTCAGACCTTGGAAGCATGCCTGGGTCCG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACAGGCACTCTTCATACTTCAGACCTTGGAAGCATGCCTGGGTCCG  432

seq1  AGACCTCAGAGGCTCGTGCAGTTTCTCCACTTGAGCCTCACTTTTATTAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTCAGAGGCTCGTGCAGTTTCTCCACTTGAGCCTCACTTTTATTAC  482

seq1  CATATATTTCATCCTTGCTGCCCAAGTTATTACCATGGTAATTGTTGAAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATTTCATCCTTGCTGCCCAAGTTATTACCATGGTAATTGTTGAAT  532

seq1  TTCTCATTACAGAAAGCCAGCTTTTCATAAATATTAGATGTGGCTATTAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATTACAGAAAGCCAGCTTTTCATAAATATTAGATGTGGCTATTAT  582

seq1  TGGCAGACACAGTGTCAGTTTCTTAAGAAATATGGAAATTTTGTAATTTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGACACAGTGTCAGTTTCTTAAGAAATATGGAAATTTTGTAATTTG  632

seq1  AGGTGATTCATTATTTATCATCTTTCTAATTTTAATGAATACAAGTGTCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGATTCATTATTTATCATCTTTCTAATTTTAATGAATACAAGTGTCT  682

seq1  CATATTCATTAAAAATAAAACAACAAAATATCTACCAAATCATTATCCTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCATTAAAAATAAAACAACAAAATATCTACCAAATCATTATCCTT  732

seq1  CTGATTGATCTGCCCCATTAGCTAAAGATCTAAGCAGAGTACCTGGAAGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTGATCTGCCCCATTAGCTAAAGATCTAAGCAGAGTACCTGGAAGC  782

seq1  ACCTTAATTTTTCTTGTAAGAACATCACCCCACTGAAGTTATTCGTTCTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAATTTTTCTTGTAAGAACATCACCCCACTGAAGTTATTCGTTCTG  832

seq1  GAAGGCACTAATTTTGTGCAATGCGTAAGAGGATTTTTTTTTTCCCCTTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCACTAATTTTGTGCAATGCGTAAGAGGATTTTTTTTTTCCCCTTC  882

seq1  TGGATTGAGGTAGATTGACATTCCTTTTCAATCTTCCAATTCACCCAATT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTGAGGTAGATTGACATTCCTTTTCAATCTTCCAATTCACCCAATT  932

seq1  CTTAGTAAAAAGGCAGAACTAAATGGAACATCTTAAACAGTGCCCGTTTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTAAAAAGGCAGAACTAAATGGAACATCTTAAACAGTGCCCGTTTC  982

seq1  ATTTTGGAGAAAGATAGTTTGAAAGGAAGTAATTTTTCTATTCACCCAAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGAGAAAGATAGTTTGAAAGGAAGTAATTTTTCTATTCACCCAAT  1032

seq1  CTTAAACGAACATATTAAGCAATGCCATTTCATTTTGGAGAGAGAGAGCG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAACGAACATATTAAGCAATGCCATTTCATTTTGGAGAGAGAGAGCG  1082

seq1  TGAAAGAGAGTCTGGAGGGTCATCTTAGGATTGAATTC  1136
      ||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAGAGTCTGGAGGGTCATCTTAGGATTGAATTC  1120