BAC Information

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BAC

Clone NameB6Ng01-156J19
Chromosome8 (Build37)
Map Location 4,956,776 - 4,958,022
singlet/doubletsinglet
Overlap geneLOC100039687
Upstream geneLOC664888, EG384770, EG664905, LOC664915, LOC664922, LOC631071, Cd209f, Cd209g, B130050I23Rik, BC068157, Lrrc8e, Map2k7, LOC100039590, Snapc2, Ctxn1, Timm44, Elavl1, Ccl25, LOC664977, Ppia-ps8_36.1, Lass4, Vmn2r-ps89, EG633533, BC003267, LOC665021, EG623133, EG665044, EG623223, LOC100040234, Shcbp1, EG622568, LOC669393, EG631359
Downstream geneLOC436026, Slc10a2, LOC434275, LOC623409, LOC669429
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156J19.bB6Ng01-156J19.g
ACCDH951069DH951070
length1,2191,126
definitionDH951069|Mus musculus domesticus DNA, BAC clone: B6Ng01-156J19, 5' end.DH951070|Mus musculus domesticus DNA, BAC clone: B6Ng01-156J19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctaccagccaactcaggaatactttgaacattaaagtaaatgat
gaaaactgatatcatgtatcaaataaaaaaggaaaagagtttatattgtt
aaaaatgaaaagccaagacaatgtttcaattccattcagaaaaattccac
tcagaaaaaaaaaaaaagacaaaataactactaaggagacaatgggcaac
attaatcaactgaccaatgcccacattaccagtgatggaggtactactta
ctcatagcttgctgcctgctaaggtgcaatgaaactaaccaaaaaacatc
caaagaatgaacagaaagtctaaactatgtataacaataacatctctctg
gtggttctctaactggtggttatatttgaaaatgatggccatcatacatt
tgagaaggtaaggatgaagtgtggaggagctgtcctttgcacttactttg
caactttcctgtcagcatgaggtcatgctcaataaataaaattatgttaa
tgacagtaaaatcagttactcacatctccctattttttccttaagtgatt
accttcattcttggtcaaaaaaccatgtaattctcccatccatgaagtgg
ctttccacatctgagatttgttgaagtatgacaaagcaacccaaagtaca
aacaagtttcttaaaattagtgacttaaaacaaaagtcatttatttagtt
caggatgtgatggctcaggagtttttatagaatcatctgtgtgattcttc
taaaaggccagggtcaggattgctcatgggtttgtagtcagccacaaacc
ttactatgattagctgcctgccagagcactgtgaaggcaataggccatgt
gtctgtagtcatgcaaatcaccataggtatatgggcttgacttatgcacg
tggttttatcagagtggcaagaacagaacagcaaattcagtgcatgggtt
ctgaatcttcatgaatacttgggtcattgcaaaactcaacccacctcacc
ctaaatcactatttcgaataaaaaacacaatgtaaggctactcagatgat
gtagtggatagagacactgctgcagactacaaccattctattgcacatgt
agttcctcctcaagacttataggacatacactaactggcaggtgaatagg
attaacctgtgagctgactactgttcatctcacctccttactagctccag
agctcagacatttcaagaa
gaattcagaacttttcagctggggaacgagagtaccagtgagtacagctt
tacgaggtacgcctggccttgaactttctaaggaaattcaagacagtcta
tcagaagtaaagtggaaaatgtttggccttgaattttttctagtgttaga
agcccttttgttccttttcacatgttatcaagtggttaaggcagggcgga
ttctagatgaaattcagggcaatctatcagaagtaaagcggggagagaga
gtaggagcaaagagaaaatatggtacacaaaataagtatacaggccttac
cacgggtcttgaacccgaggaaaagtttaggtcaggtaagaatacctggg
gagagattagaaggaaggaaaagaaaaaagaaaagaaaaaagatcgatta
gcggaggtctctaggagataatcatcactagatgagctcaaggagccagt
ttttaatagttctgaatcagatgaaaaggctattagggcctggaaggcgc
tctcccgagcaggtgaagccactggacaataatgacagaggcaggctctt
gcagcctacaaggtcttattgtctaccctggagttgtagatcaagattat
aaaggggaacttcaggttctctgttcttgtcctcaagttgtcttttctat
atcacaaaggggacagaatagctcaactaataattttgccaagcctacat
ggctgttttttcttcctctggtattcctagagctgccagagagattggtt
ctactgaaaatgattctgattacttaataatgcctttagattgttgtcaa
attttatctactcacgtaggggtaaaccctcgtggcgtcaggccattaca
ggtctgacaaatggatgtcacgcatatttcctcctttgagagaaatcaat
attacatgtttagatagaagagatcaccttcataccttaaatgattttca
aagctgttggagatattaatttgctcagacctttttaagatcttcgctga
gtaagctttggtttgtatttagaggagatctcatatcttcttcctagact
cttactctagctgctaactagctacaaatgtgaaagctttacgatgcaca
attcaccgattgagattcgcagccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_4956776_4958022
seq2: B6Ng01-156J19.b_48_1266 (reverse)

seq1  TTCTTAGAAATGACTGAGCTTCTGTGAGCTAGTTAAGGAGAGTGGAGGAT  50
      ||||| |||||| |||||| |||| ||||||| ||||||| |||   |||
seq2  TTCTT-GAAATGTCTGAGC-TCTG-GAGCTAG-TAAGGAG-GTG--AGAT  43

seq1  G-ACAGTATGTCAGCTCACAGGTTTATATCCCTACTCCACTGCCAGGTGA  99
      | |||||| ||||||||||||||| ||   |||| ||  ||||||| |  
seq2  GAACAGTA-GTCAGCTCACAGGTTAAT---CCTATTCACCTGCCAGTT--  87

seq1  AGTTGATGGTTCCTATGAGGGTCATGGAGGAGGAACTACAATGTTGGCAA  149
      |||  |||  |||||| |  ||| | ||||||||||||| ||||  ||||
seq2  AGTGTATG--TCCTATAA--GTC-TTGAGGAGGAACTAC-ATGT--GCAA  129

seq1  TAGGATGTGTTGTTAGGTCTGGCAGCAAGTGTCTCTATCCACTACATCAT  199
      ||| ||| |||||   |||| ||||| |||||||||||||||||||||||
seq2  TAGAATG-GTTGT--AGTCT-GCAGC-AGTGTCTCTATCCACTACATCAT  174

seq1  CTGGGTAGCCCTTACATTGTGTTTTTTATTTGGAAATAGTGATTTAGGGG  249
      ||| |||| ||||||||||||||||||| || |||||||||||||| |||
seq2  CTGAGTAG-CCTTACATTGTGTTTTTTA-TTCGAAATAGTGATTTA-GGG  221

seq1  TGAGGTGGGTTGAGTTTTGCAATGACCCAAGTATTCATGAAGATTCAGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTGGGTTGAGTTTTGCAATGACCCAAGTATTCATGAAGATTCAGAA  271

seq1  CCCATGCACTGAATTTGCTGTTCTGTTCTTGCACCTCTGATAAAACCACG  349
      ||||||||||||||||||||||||||||||||  ||||||||||||||||
seq2  CCCATGCACTGAATTTGCTGTTCTGTTCTTGCCACTCTGATAAAACCACG  321

seq1  TGCATAAGTCAAGCCCATATACCTATGGTGATTTGCATGACTACAGACAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAAGTCAAGCCCATATACCTATGGTGATTTGCATGACTACAGACAC  371

seq1  ATGGCCTATTGCCTTCACAGTGCTCTGGCAGGCAGCTAATCATAGTAAGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTATTGCCTTCACAGTGCTCTGGCAGGCAGCTAATCATAGTAAGG  421

seq1  TTTGTGGCTGACTACAAACCCCTGAGCAATCCTGACCCTGGCCTTTTAGA  499
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTTGTGGCTGACTACAAACCCATGAGCAATCCTGACCCTGGCCTTTTAGA  471

seq1  AGAATCACACAGATGATTCTATAAAAACTCCTGAGCCATCACATCCTGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCACACAGATGATTCTATAAAAACTCCTGAGCCATCACATCCTGAA  521

seq1  CTAAATAAATGACTTTTGTTTTAAGTCACTAATTTTAAGAAACTTGTTTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATAAATGACTTTTGTTTTAAGTCACTAATTTTAAGAAACTTGTTTG  571

seq1  TACTTTGGGTTGCTTTGTCATACTTCAACAAATCTCAGATGTGGAAAGCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTGGGTTGCTTTGTCATACTTCAACAAATCTCAGATGTGGAAAGCC  621

seq1  ACTTCATGGATGGGAGAATTACATGGTTTTTTGACCAAGAATGAAGGTAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCATGGATGGGAGAATTACATGGTTTTTTGACCAAGAATGAAGGTAA  671

seq1  TCACTTAAGGAAAAAATAGGGAGATGTGAGTAACTGATTTTACTGTCATT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTAAGGAAAAAATAGGGAGATGTGAGTAACTGATTTTACTGTCATT  721

seq1  AACATAATTTTATTTATTGAGCATGACCTCATGCTGACAGGAAAGTTGCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAATTTTATTTATTGAGCATGACCTCATGCTGACAGGAAAGTTGCA  771

seq1  AAGTAAGTGCAAAGGACAGCTCCTCCACACTTCATCCTTACCTTCTCAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGTGCAAAGGACAGCTCCTCCACACTTCATCCTTACCTTCTCAAA  821

seq1  TGTATGATGGCCATCATTTTCAAATATAACCACCAGTTAGAGAACCACCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGATGGCCATCATTTTCAAATATAACCACCAGTTAGAGAACCACCA  871

seq1  GAGAGATGTTATTGTTATACATAGTTTAGACTTTCTGTTCATTCTTTGGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATGTTATTGTTATACATAGTTTAGACTTTCTGTTCATTCTTTGGA  921

seq1  TGTTTTTTGGTTAGTTTCATTGCACCTTAGCAGGCAGCAAGCTATGAGTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTTGGTTAGTTTCATTGCACCTTAGCAGGCAGCAAGCTATGAGTA  971

seq1  AGTAGTACCTCCATCACTGGTAATGTGGGCATTGGTCAGTTGATTAATGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTACCTCCATCACTGGTAATGTGGGCATTGGTCAGTTGATTAATGT  1021

seq1  TGCCCATTGTCTCCTTAGTAGTTATTTTGTCTTTTTTTTTTTTTCTGAGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATTGTCTCCTTAGTAGTTATTTTGTCTTTTTTTTTTTTTCTGAGT  1071

seq1  GGAATTTTTCTGAATGGAATTGAAACATTGTCTTGGCTTTTCATTTTTAA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTTTCTGAATGGAATTGAAACATTGTCTTGGCTTTTCATTTTTAA  1121

seq1  CAATATAAACTCTTTTCCTTTTTTATTTGATACATGATATCAGTTTTCAT  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATAAACTCTTTTCCTTTTTTATTTGATACATGATATCAGTTTTCAT  1171

seq1  CATTTACTTTAATGTTCAAAGTATTCCTGAGTTGGCTGGTAGGAATTC  1247
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACTTTAATGTTCAAAGTATTCCTGAGTTGGCTGGTAGGAATTC  1219