BAC Information

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BAC

Clone NameB6Ng01-157H14
Chromosome8 (Build37)
Map Location 69,548,624 - 69,720,055
singlet/doubletdoublet
Overlap geneLOC665453
Upstream geneMarch1, 1810029B16Rik, Tktl2, Npy5r, Npy1r, BC053440
Downstream geneNat1, Nat2, LOC100041265, Nat3, Psd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157H14.bB6Ng01-157H14.g
ACCDH951699DH951700
length1,0951,077
definitionDH951699|Mus musculus domesticus DNA, BAC clone: B6Ng01-157H14, 5' end.DH951700|Mus musculus domesticus DNA, BAC clone: B6Ng01-157H14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,718,949 - 69,720,055)(69,548,624 - 69,549,698)
sequence
gaattctcaactcatgattcaatatgacattataaaatataacattacaa
aagcaaaattagaacaggaaatagctcactgggtatgcagaagaggtgag
gcagcaacttccaagagaactttgtcagaggaatctcaaaggatccattt
aagtcctccagcagtcagtggtgacagtgatagctggtatccaccagggg
agtttattaaggactcagctcccagggcttctactaggagctaaattatc
aaggaaagtaagtgtttgaaacaatgcacaccactgtcactgagtagaaa
ccaccgttatccaccctcaggagacctgggaatcatgaggacacccataa
acccgaattactggtcacagtagaggagacaatcttaaaaacaaagtctt
attgaggacagctgtctcaggcctatgtctagtctttctcttacaccatg
gtaactctgctgcaactattccaattattgtatagatctgagtgctttca
tgggttaaaatccatgaatatgaaacagccatcctttttaaatttatgtt
agtaatgtaagttgagaatgtacattggattgtcttgtcttcttattcta
ctatagcattacatcttaatagcaaaactggtcagaaggtcagaaatttt
cactcaatattttcactgggctgaatgatacatttatttaaaaaactatt
aacacctcaagtaaacacatatcaacataactatattagattgtataaga
tgatatttgtttgagctacctacttctcactgagatagaagttaacaatt
ttttcttctctacttaaatactttttgaaagattttatgtactgagaaac
agattaagccaagctctataataaagcccaggtgtggcttttatgcctgg
aagaaaatgtgagcagaaagaataactcggaatcaaattggaaagtaaaa
atgacattgggaaagagcacatttgtcattctgatgtgccacaccatctt
tacagaatatggaataatgagatgtgcttcataatatatgtctccggtgt
tgtatgcagtgcatttcagatgaataaaaatgtatatggtgtatg
gaattcagccatgatcagaacagaactgatgcatactgttgctacgagaa
acagcaaaactactgtgctgtcaagaataccattatcataataggcaaaa
attaaataaagctttaaaagagaagctgatatgaatttcaattttgtttt
actaaattgaccaattagagatttattagattttagcagtagctagttaa
attgattgtgtctaatgcgatgtgtcaatgagtcactatttgataataaa
tgacaacctaattggctttattcaccattttgtagatacagctttagtct
ctcataaatttaacacttgaggatatgaagttcattatagtcaaataatc
actttctccacattaagaattaatttacttaattgtataaatcaaaacaa
ttaaaatggaccatgtgttaaaatgtttactttgacctttgtcattcatc
caccgaacattcatttcaagacagaacaccaaaatgtatccaagaaataa
aaaaaaattaagaattccattatagaatcagttatttagttttaaaaact
agatatttctactagcatgtgaataaaaatgtgtccaccatatttcagat
ttttattataaatgtcactaagacatttcacttttctcttataattagga
agtcaaatatcatggccaaccaaaagcattcaggaaaagcagacataata
taagcatagagttttcacagtttcttatctctacatttaacattttttat
gaaggttatataataaataggttaaaagatgttttgagtgtactctaata
atctaacatgattatgtgcattttattcctccaagtcctaaccaagcata
aaaatgtataagaattttcctgtaagtctgctagggataggagtggaatc
ctcacatgagtgaaacagagaagaagctccaaatagtaccaggtgtcgtg
tgttcttggaattgacgtccttatctcaaaactctcttattattttagtc
ttgctttactcttctttatagatttggtctatggacagatggtttatgcc
actattctatgtcctttcttctctgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_69718949_69720055
seq2: B6Ng01-157H14.b_45_1139 (reverse)

seq1  CATACA-CATATACATATTTTATATCATCTTGAAAATGCACTGCATACAA  49
      |||||| ||||||||| |||||| ||||||   ||||||||||||||| |
seq2  CATACACCATATACAT-TTTTAT-TCATCT--GAAATGCACTGCATAC-A  45

seq1  ACACCGGGAGACATATATTATGAAGCCACATTCTTCATTTATTTCCATTA  99
      ||||| ||||||||||||||||||| |||||   |||||   ||||| ||
seq2  ACACC-GGAGACATATATTATGAAG-CACAT--CTCATT--ATTCCA-TA  88

seq1  TTCTGTAAAGATGGTGTGGCACATCAGAATGAACAAATGTGCTCTTT-CC  148
      ||||||||||||||||||||||||||||||| ||||||||||||||| ||
seq2  TTCTGTAAAGATGGTGTGGCACATCAGAATG-ACAAATGTGCTCTTTCCC  137

seq1  AATGTCATTTTTTACTTTCCAATTTGATTCCGGGTTATTCTTTCTGCTCA  198
      ||||||| |||||||||||||||||||||||| |||||||||||||||||
seq2  AATGTCA-TTTTTACTTTCCAATTTGATTCCGAGTTATTCTTTCTGCTCA  186

seq1  CATTTTCTTCCAGGCATAAAAGCCACACCTGGGCTTTATTATAGAGCTTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTTCCAGGCATAAAAGCCACACCTGGGCTTTATTATAGAGCTTG  236

seq1  GCTTAATCTGTTTCTCAGTACATAAAATCTTTCAAAAAGTATTTAAGTAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAATCTGTTTCTCAGTACATAAAATCTTTCAAAAAGTATTTAAGTAG  286

seq1  AGAAGAAAAAATTGTTAACTTCTATCTCAGTGAGAAGTAGGTAGCTCAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAAAATTGTTAACTTCTATCTCAGTGAGAAGTAGGTAGCTCAAA  336

seq1  CAAATATCATCTTATACAATCTAATATAGTTATGTTGATATGTGTTTACT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATCATCTTATACAATCTAATATAGTTATGTTGATATGTGTTTACT  386

seq1  TGAGGTGTTAATAGTTTTTTAAATAAATGTATCATTCAGCCCAGTGAAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTGTTAATAGTTTTTTAAATAAATGTATCATTCAGCCCAGTGAAAA  436

seq1  TATTGAGTGAAAATTTCTGACCTTCTGACCAGTTTTGCTATTAAGATGTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAGTGAAAATTTCTGACCTTCTGACCAGTTTTGCTATTAAGATGTA  486

seq1  ATGCTATAGTAGAATAAGAAGACAAGACAATCCAATGTACATTCTCAACT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTATAGTAGAATAAGAAGACAAGACAATCCAATGTACATTCTCAACT  536

seq1  TACATTACTAACATAAATTTAAAAAGGATGGCTGTTTCATATTCATGGAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTACTAACATAAATTTAAAAAGGATGGCTGTTTCATATTCATGGAT  586

seq1  TTTAACCCATGAAAGCACTCAGATCTATACAATAATTGGAATAGTTGCAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACCCATGAAAGCACTCAGATCTATACAATAATTGGAATAGTTGCAG  636

seq1  CAGAGTTACCATGGTGTAAGAGAAAGACTAGACATAGGCCTGAGACAGCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTACCATGGTGTAAGAGAAAGACTAGACATAGGCCTGAGACAGCT  686

seq1  GTCCTCAATAAGACTTTGTTTTTAAGATTGTCTCCTCTACTGTGACCAGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCAATAAGACTTTGTTTTTAAGATTGTCTCCTCTACTGTGACCAGT  736

seq1  AATTCGGGTTTATGGGTGTCCTCATGATTCCCAGGTCTCCTGAGGGTGGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCGGGTTTATGGGTGTCCTCATGATTCCCAGGTCTCCTGAGGGTGGA  786

seq1  TAACGGTGGTTTCTACTCAGTGACAGTGGTGTGCATTGTTTCAAACACTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGGTGGTTTCTACTCAGTGACAGTGGTGTGCATTGTTTCAAACACTT  836

seq1  ACTTTCCTTGATAATTTAGCTCCTAGTAGAAGCCCTGGGAGCTGAGTCCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCTTGATAATTTAGCTCCTAGTAGAAGCCCTGGGAGCTGAGTCCT  886

seq1  TAATAAACTCCCCTGGTGGATACCAGCTATCACTGTCACCACTGACTGCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAACTCCCCTGGTGGATACCAGCTATCACTGTCACCACTGACTGCT  936

seq1  GGAGGACTTAAATGGATCCTTTGAGATTCCTCTGACAAAGTTCTCTTGGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGACTTAAATGGATCCTTTGAGATTCCTCTGACAAAGTTCTCTTGGA  986

seq1  AGTTGCTGCCTCACCTCTTCTGCATACCCAGTGAGCTATTTCCTGTTCTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCTGCCTCACCTCTTCTGCATACCCAGTGAGCTATTTCCTGTTCTA  1036

seq1  ATTTTGCTTTTGTAATGTTATATTTTATAATGTCATATTGAATCATGAGT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCTTTTGTAATGTTATATTTTATAATGTCATATTGAATCATGAGT  1086

seq1  TGAGAATTC  1107
      |||||||||
seq2  TGAGAATTC  1095

seq1: chr8_69548624_69549698
seq2: B6Ng01-157H14.g_67_1143

seq1  GAATTCAGCCATGATCAGAACAGAACTGATGCATACTGTTGCTACGAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCATGATCAGAACAGAACTGATGCATACTGTTGCTACGAGAA  50

seq1  ACAGCAAAACTACTGTGCTGTCAAGAATACCATTATCATAATAGGCAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAAAACTACTGTGCTGTCAAGAATACCATTATCATAATAGGCAAAA  100

seq1  ATTAAATAAAGCTTTAAAAGAGAAGCTGATATGAATTTCAATTTTGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATAAAGCTTTAAAAGAGAAGCTGATATGAATTTCAATTTTGTTTT  150

seq1  ACTAAATTGACCAATTAGAGATTTATTAGATTTTAGCAGTAGCTAGTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAATTGACCAATTAGAGATTTATTAGATTTTAGCAGTAGCTAGTTAA  200

seq1  ATTGATTGTGTCTAATGCGATGTGTCAATGAGTCACTATTTGATAATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTGTGTCTAATGCGATGTGTCAATGAGTCACTATTTGATAATAAA  250

seq1  TGACAACCTAATTGGCTTTATTCACCATTTTGTAGATACAGCTTTAGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAACCTAATTGGCTTTATTCACCATTTTGTAGATACAGCTTTAGTCT  300

seq1  CTCATAAATTTAACACTTGAGGATATGAAGTTCATTATAGTCAAATAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAAATTTAACACTTGAGGATATGAAGTTCATTATAGTCAAATAATC  350

seq1  ACTTTCTCCACATTAAGAATTAATTTACTTAATTGTATAAATCAAAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTCCACATTAAGAATTAATTTACTTAATTGTATAAATCAAAACAA  400

seq1  TTAAAATGGACCATGTGTTAAAATGTTTACTTTGACCTTTGTCATTCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGGACCATGTGTTAAAATGTTTACTTTGACCTTTGTCATTCATC  450

seq1  CACCGAACATTCATTTCAAGACAGAACACCAAAATGTATCCAAGAAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGAACATTCATTTCAAGACAGAACACCAAAATGTATCCAAGAAATAA  500

seq1  AAAAAAATTAAGAATTCCATTATAGAATCAGTTATTTAGTTTTAAAAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATTAAGAATTCCATTATAGAATCAGTTATTTAGTTTTAAAAACT  550

seq1  AGATATTTCTACTAGCATGTGAATAAAAATGTGTCCACCATATTTCAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTTCTACTAGCATGTGAATAAAAATGTGTCCACCATATTTCAGAT  600

seq1  TTTTATTATAAATGTCACTAAGACATTTCACTTTTCTCTTATAATTAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTATAAATGTCACTAAGACATTTCACTTTTCTCTTATAATTAGGA  650

seq1  AGTCAAATATCATGGCCAACCAAAAGCATTCAGGAAAAGCAGACATAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAATATCATGGCCAACCAAAAGCATTCAGGAAAAGCAGACATAATA  700

seq1  TAAGCATAGAGTTTTCACAGTTTCTTATCTCTACATTTAACATTTTTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCATAGAGTTTTCACAGTTTCTTATCTCTACATTTAACATTTTTTAT  750

seq1  GAAGGTTATATAATAAATAGGTTAAAAGATGTTTTGAGTGTACTCTAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTTATATAATAAATAGGTTAAAAGATGTTTTGAGTGTACTCTAATA  800

seq1  ATCTAACATGATTATGTGCATTTTATTCCTCCAAGTCCTAACCAAGCATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAACATGATTATGTGCATTTTATTCCTCCAAGTCCTAACCAAGCATA  850

seq1  AAAATGTATAAGAA-TTTCCTGTAAGTCTGCTAGGGATAGGAGTGGAATC  899
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AAAATGTATAAGAATTTTCCTGTAAGTCTGCTAGGGATAGGAGTGGAATC  900

seq1  C-CACATTGAGTGAAACAGAGAAGAAACT-CAAATAGTACCA-GTGTCGT  946
      | |||| ||||||||||||||||||| || |||||||||||| |||||||
seq2  CTCACA-TGAGTGAAACAGAGAAGAAGCTCCAAATAGTACCAGGTGTCGT  949

seq1  GTGTTCTTGGAATTGACGTCCTTATCCCAAAACTC-CCTATTATTTTAGT  995
      |||||||||||||||||||||||||| |||||||| | ||||||||||||
seq2  GTGTTCTTGGAATTGACGTCCTTATCTCAAAACTCTCTTATTATTTTAGT  999

seq1  C-TGCTTTACTCTTCCTTTATAGAATCTGTCTAATGGAACAGATGGTTTA  1044
      | |||||||||||| ||||||||| |  |||| |||| ||||||||||||
seq2  CTTGCTTTACTCTT-CTTTATAGATTTGGTCT-ATGG-ACAGATGGTTTA  1046

seq1  TG-CACTAATTCTATGTCCTTTCTTCTCTGAC  1075
      || |||| ||||||||||||||||||||||||
seq2  TGCCACT-ATTCTATGTCCTTTCTTCTCTGAC  1077