BAC Information

Click to search

BAC

Clone NameB6Ng01-157I21
Chromosome8 (Build37)
Map Location 31,886,412 - 32,015,845
singlet/doubletdoublet
Overlap genenone
Upstream geneEG628189
Downstream geneLOC547008, Dusp26, Rnf122, BC019943, Rbm13, Fut10, LOC666330, LOC666568, 7420700N18Rik, LOC100041329, EG330731, LOC100041340, Nrg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157I21.bB6Ng01-157I21.g
ACCDH951756DH951757
length1,1711,191
definitionDH951756|Mus musculus domesticus DNA, BAC clone: B6Ng01-157I21, 5' end.DH951757|Mus musculus domesticus DNA, BAC clone: B6Ng01-157I21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,014,649 - 32,015,845)(31,886,412 - 31,887,629)
sequence
gaattcacttgctatggggagttgttatgtttattactcctagcttttca
atttgacaatatagctgtatgaatatactctataacaatgaattttccat
atattttacaaatgaacaaaagaacgaatgaacacatatccaatttagtt
tgaacataatagattacatattgagtaagagagcaaattaagactttgaa
ggaggcaatatgttctaaaaccttggaaactgaattgaatttcaaaaatg
ccgtttttaaacaaaagttttctcaataatttactacttatgtttatatt
atgtgaaggaccttaacataacacatgagccccctcttctgaactctgaa
ctgtagctagttgtttagctaccatgtttctcctaccaattagttttcct
ggttctttgtttatgaaaccctttaatactttacagagaatgtagccgta
aaaatttgaacgcttttgccccaaatcaatcaatgtaccaaatatcttgg
atcgcatatcctaaagtttgtcttgtgaaacatgtcatgtatgcaaaagg
ggtagtgaaacgaacacaccatttcatggcattcattacagaaattttat
aattatacttgaaagttcagtggtggaatttttattgaacaaggctctaa
ttgaaaccaggaataaatgatgctattaatgtatatccaagtctttggaa
agaatgacacgacacagatcttcatgtatccctatctctgtgagtctgca
ttttgctttgctgttggggtgtcggaaaactgcttggtgaggtgaaacac
agaggcgcaaggctatgttcctttctcgccaatggagtggtggccttgtg
ggactctgacatgcctgcccttcaagggaggctaaacacagctagtagag
agggttccagactgctttcttcagcaaagaaacacgagaaggggcatgga
ctgggatagatgctgtggttctcaaactcttgggggactcaaatgcgctg
ggaatgcaaagtgttgagaacaaggtctcagctgagataagcctggtgca
gggttagaattagctcttagctgaagggtgtgcaagaaatggaaggcctc
ctggactctgctctcgaaaggctcccctcctgtggacctgataagagaca
gtccttgctgtgccactttat
gaattccccatccatgtttattgtcacattctatttttttcttttttttt
tctttcttttttttaattggctattttttctttttttttatatttttatt
acatattttcctcaattacatttccaatgctatcccaaaagtcccccata
ccctcccccccacttccctacccacccattcccattattttggccctggc
ggtcccctgtactggggcatataaagtttgcttattgtcacattcttaaa
acaaaaataaatattctttttttttgccatttcaacaaaggcaagccaag
gctttttcaacattgtgtttgtttctttttgtgaataaatgcatttaggg
gataattggtccattttattcttccttcttctatgcctccttttgagaaa
taccatgctccatgttgtgtttgaagcattgctctctgctatatttgaag
ggcacaatgacattgattgagcagttaacctcttcagtctttagtttccc
cgtgaaagaatgaggggagaggtttaagcatcttctgcacttttataggc
acagcgagatgcttccaattcacattaaagtcattcagggggggctcaga
ggatggctcaggtgggaaagtgcttcctgtacagtgtgggatcagggctc
tgatatccaacaatcatgtgagtgcttagcaaatgtggcagctcagctgt
aaccctaatgctcaggagacagagacaggatcccaggcaggatctgccta
actgatcaccaaactggtgatctctgtgttcagtggagagaccctgcctc
gatatatgaaatggatacagacatccagtgttaaagtctgactgacaaag
atacacacaggtttacacttagaaatgtaaacatttgggtgctgcagaga
tggctcagcggttaagagctccaactgttcttccaaaggacctgagttca
aatcccagcaccacatggtgactcacaccattccataacaagaatctgat
gccctcattctgaaagctacagttttacttcttttataaatacctaaaag
gagaaaaaggaggaaggatggaaggagcagaaggaagatggaggagaagg
agagggacttgatataaatataccgctctcatctctccatggctcggaaa
attacaaacacactttgtgtcgtgtgtaccaaatttgaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_32014649_32015845
seq2: B6Ng01-157I21.b_51_1221 (reverse)

seq1  ATAAAGTTTGGACAAGCAAGGACTGTCTCTCTAATCAAGGTCCACCAGAG  50
      ||||||  |||   |||||||||||  ||||| ||| ||||||||  |||
seq2  ATAAAG--TGGCACAGCAAGGACTG--TCTCTTATC-AGGTCCACAGGAG  45

seq1  GGGGAGGCCTTTGTCACGCAGAGCCAGAGGTGCAGAAGGCCCTTCCACAT  100
      |||   ||||||    || |||| |||| || ||| ||| |||||  |||
seq2  GGG--AGCCTTT----CG-AGAG-CAGA-GTCCAGGAGG-CCTTC--CAT  83

seq1  TCCTGCCACACACCCTCAGCTAAAGCCAAATTCTAACCCTGCACCAGGCT  150
      | ||  ||||| || ||||||||   | ||||||||||||||||||||||
seq2  TTCTTGCACAC-CCTTCAGCTAAGAGCTAATTCTAACCCTGCACCAGGCT  132

seq1  TATCTCAGGCCTGAGGACCCTTGTTCTCAACACTTTGCAATTCCCAGCCG  200
      ||||||||  |||||   |||||||||||||||||||| |||||||| ||
seq2  TATCTCAG--CTGAG--ACCTTGTTCTCAACACTTTGC-ATTCCCAG-CG  176

seq1  CATTTGGGTCCCCCAAGAGTTTGAGAACCACAGCATCTATCCCAGTCCAT  250
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGAGTCCCCCAAGAGTTTGAGAACCACAGCATCTATCCCAGTCCAT  226

seq1  GCCCCTTCTCGTGTTTCTTTGCTGAAGAAAAGCAGTCTGGAACCCTCTCT  300
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GCCCCTTCTCGTGTTTCTTTGCTGAAG-AAAGCAGTCTGGAACCCTCTCT  275

seq1  ACTAGCCTGTGTTTAGCCTCCCTTGAAGGGCAGGCATGTCAGAGTCCCAC  350
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAG-CTGTGTTTAGCCTCCCTTGAAGGGCAGGCATGTCAGAGTCCCAC  324

seq1  AAGGCCACCACTCCATTGGCGAGAAAGGAACATAGCCTTGCGCCTCTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCACCACTCCATTGGCGAGAAAGGAACATAGCCTTGCGCCTCTGTG  374

seq1  TTTCACCTCACCAAGCAGTTTTCCGACACCCCAACAGCAAAGCAAAATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACCTCACCAAGCAGTTTTCCGACACCCCAACAGCAAAGCAAAATGC  424

seq1  AGACTCACAGAGATAGGGATACATGAAGATCTGTGTCGTGTCATTCTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCACAGAGATAGGGATACATGAAGATCTGTGTCGTGTCATTCTTTC  474

seq1  CAAAGACTTGGATATACATTAATAGCATCATTTATTCCTGGTTTCAATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACTTGGATATACATTAATAGCATCATTTATTCCTGGTTTCAATTA  524

seq1  GAGCCTTGTTCAATAAAAATTCCACCACTGAACTTTCAAGTATAATTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTTGTTCAATAAAAATTCCACCACTGAACTTTCAAGTATAATTATA  574

seq1  AAATTTCTGTAATGAATGCCATGAAATGGTGTGTTCGTTTCACTACCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCTGTAATGAATGCCATGAAATGGTGTGTTCGTTTCACTACCCCT  624

seq1  TTTGCATACATGACATGTTTCACAAGACAAACTTTAGGATATGCGATCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATACATGACATGTTTCACAAGACAAACTTTAGGATATGCGATCCA  674

seq1  AGATATTTGGTACATTGATTGATTTGGGGCAAAAGCGTTCAAATTTTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTTGGTACATTGATTGATTTGGGGCAAAAGCGTTCAAATTTTTAC  724

seq1  GGCTACATTCTCTGTAAAGTATTAAAGGGTTTCATAAACAAAGAACCAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACATTCTCTGTAAAGTATTAAAGGGTTTCATAAACAAAGAACCAGG  774

seq1  AAAACTAATTGGTAGGAGAAACATGGTAGCTAAACAACTAGCTACAGTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTAATTGGTAGGAGAAACATGGTAGCTAAACAACTAGCTACAGTTC  824

seq1  AGAGTTCAGAAGAGGGGGCTCATGTGTTATGTTAAGGTCCTTCACATAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTCAGAAGAGGGGGCTCATGTGTTATGTTAAGGTCCTTCACATAAT  874

seq1  ATAAACATAAGTAGTAAATTATTGAGAAAACTTTTGTTTAAAAACGGCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACATAAGTAGTAAATTATTGAGAAAACTTTTGTTTAAAAACGGCAT  924

seq1  TTTTGAAATTCAATTCAGTTTCCAAGGTTTTAGAACATATTGCCTCCTTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAATTCAATTCAGTTTCCAAGGTTTTAGAACATATTGCCTCCTTC  974

seq1  AAAGTCTTAATTTGCTCTCTTACTCAATATGTAATCTATTATGTTCAAAC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTTAATTTGCTCTCTTACTCAATATGTAATCTATTATGTTCAAAC  1024

seq1  TAAATTGGATATGTGTTCATTCGTTCTTTTGTTCATTTGTAAAATATATG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGGATATGTGTTCATTCGTTCTTTTGTTCATTTGTAAAATATATG  1074

seq1  GAAAATTCATTGTTATAGAGTATATTCATACAGCTATATTGTCAAATTGA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTCATTGTTATAGAGTATATTCATACAGCTATATTGTCAAATTGA  1124

seq1  AAAGCTAGGAGTAATAAACATAACAACTCCCCATAGCAAGTGAATTC  1197
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTAGGAGTAATAAACATAACAACTCCCCATAGCAAGTGAATTC  1171

seq1: chr8_31886412_31887629
seq2: B6Ng01-157I21.g_68_1258

seq1  GAATTCCCCATCCATGTTTATTGTCACATTCTATTTTTTTCTTTTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCATCCATGTTTATTGTCACATTCTATTTTTTTCTTTTTTTTT  50

seq1  TCTTTCTTTTTTTTAATTGGCTATTTTTTCTTTTTTTTTATATTTTTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTTTTTTAATTGGCTATTTTTTCTTTTTTTTTATATTTTTATT  100

seq1  ACATATTTTCCTCAATTACATTTCCAATGCTATCCCAAAAGTCCCCCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTTTCCTCAATTACATTTCCAATGCTATCCCAAAAGTCCCCCATA  150

seq1  CCCTCCCCCCCACTTCCCTACCCACCCATTCCCATTATTTTGGCCCTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCCCCACTTCCCTACCCACCCATTCCCATTATTTTGGCCCTGGC  200

seq1  GGTCCCCTGTACTGGGGCATATAAAGTTTGCTTATTGTCACATTCTTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCCTGTACTGGGGCATATAAAGTTTGCTTATTGTCACATTCTTAAA  250

seq1  ACAAAAATAAATATTCTTTTTTTTTGCCATTTCAACAAAGGCAAGCCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAATAAATATTCTTTTTTTTTGCCATTTCAACAAAGGCAAGCCAAG  300

seq1  GCTTTTTCAACATTGTGTTTGTTTCTTTTTGTGAATAAATGCATTTAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTCAACATTGTGTTTGTTTCTTTTTGTGAATAAATGCATTTAGGG  350

seq1  GATAATTGGTCCATTTTATTCTTCCTTCTTCTATGCCTCCTTTTGAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTGGTCCATTTTATTCTTCCTTCTTCTATGCCTCCTTTTGAGAAA  400

seq1  TACCATGCTCCATGTTGTGTTTGAAGCATTGCTCTCTGCTATATTTGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATGCTCCATGTTGTGTTTGAAGCATTGCTCTCTGCTATATTTGAAG  450

seq1  GGCACAATGACATTGATTGAGCAGTTAACCTCTTCAGTCTTTAGTTTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAATGACATTGATTGAGCAGTTAACCTCTTCAGTCTTTAGTTTCCC  500

seq1  CGTGAAAGAATGAGGGGAGAGGTTTAAGCATCTTCTGCACTTTTATAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGAAAGAATGAGGGGAGAGGTTTAAGCATCTTCTGCACTTTTATAGGC  550

seq1  ACAGCGAGATGCTTCCAATTCACATTAAAGTCATTCAGGGGGGGCTCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCGAGATGCTTCCAATTCACATTAAAGTCATTCAGGGGGGGCTCAGA  600

seq1  GGATGGCTCAGGTGGGAAAGTGCTTCCTGTACAGTGTGGGATCAGGGCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGCTCAGGTGGGAAAGTGCTTCCTGTACAGTGTGGGATCAGGGCTC  650

seq1  TGATATCCAACAATCATGTGAGTGCTTAGCAAATGTGGCAGCTCAGCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATCCAACAATCATGTGAGTGCTTAGCAAATGTGGCAGCTCAGCTGT  700

seq1  AACCCTAATGCTCAGGAGACAGAGACAGGATCCCAGGCAGGATCTGCCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTAATGCTCAGGAGACAGAGACAGGATCCCAGGCAGGATCTGCCTA  750

seq1  ACTGATCACCAAACTGGTGATCTCTGTGTTCAGTGGAGAGACCCTGCCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATCACCAAACTGGTGATCTCTGTGTTCAGTGGAGAGACCCTGCCTC  800

seq1  GATATATGAAATGGATACAGACATCCAGTGTTAAAGTCTGACTGACAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATGAAATGGATACAGACATCCAGTGTTAAAGTCTGACTGACAAAG  850

seq1  ATACACACAGGTCTACACTTAGAAATGTAAACATTTGGG-GCTGCAGAGA  899
      |||||||||||| |||||||||||||||||||||||||| ||||||||||
seq2  ATACACACAGGTTTACACTTAGAAATGTAAACATTTGGGTGCTGCAGAGA  900

seq1  TGGCTCAGCGGTTAAGAGCTCCAACTGTTCTTCCAAAGGACCTGAGTTCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCAGCGGTTAAGAGCTCCAACTGTTCTTCCAAAGGACCTGAGTTCA  950

seq1  AATCCCAGCAACCACATGGTGACTCACAACCATCCATAACAAG-ATCTGA  998
      ||||||||| |||||||||||||||||| |  ||||||||||| ||||||
seq2  AATCCCAGC-ACCACATGGTGACTCACACCATTCCATAACAAGAATCTGA  999

seq1  TGCCCTCA-TCTGACAGCTACAG-TGTACTTACATATAATAAATAAACAA  1046
      |||||||| ||||| |||||||| | |||||   | | |||||||   ||
seq2  TGCCCTCATTCTGAAAGCTACAGTTTTACTT--CTTTTATAAATACCTAA  1047

seq1  AAAAAAGAAAGAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA  1096
             || || |||||| | ||| ||  ||| ||    ||| ||||  
seq2  -------AAGGAGAAAAAGGAGGAAGGATGGAAGGAGCAGAAGGAAGATG  1090

seq1  GAAAGAAAGAAAGAAAGAAAGAAAGAGAAATTTGAATATAAATATACACG  1146
      ||             |||| |  ||||  | ||| |||||||||||| ||
seq2  GA-----------GGAGAAGG--AGAGGGACTTG-ATATAAATATAC-CG  1125

seq1  CATTCCTATCCTCACAATGTGCTCAGGAAAAATACAAAAACACACTTTGT  1196
      |  || |   ||| | ||| |||| |||||| |||  |||||||||||||
seq2  CTCTCAT---CTCTCCATG-GCTC-GGAAAATTAC--AAACACACTTTGT  1168

seq1  GTC-TGTGTACACATATTGAACA  1218
      ||| |||||||  |  |||||||
seq2  GTCGTGTGTACCAAATTTGAACA  1191