BAC Information

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BAC

Clone NameB6Ng01-157K03
Chromosome8 (Build37)
Map Location 27,246,573 - 27,247,684
singlet/doubletsinglet
Overlap geneRnf170
Upstream geneTacc1, LOC670822, LOC100040998, Fgfr1, D030041N04Rik, LOC100042416, Whsc1l1, Ppapdc1, Bag4, Lsm1, Star, Ash2l, Kcnu1, Hgsnat, 4930444A02Rik, Fnta, Hook3, 1700047A11Rik
Downstream geneThap1, Zfp703, Erlin2, Prosc, Gpr124, Brf2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157K03.bB6Ng01-157K03.g
ACCDH951812DH951813
length1,1051,180
definitionDH951812|Mus musculus domesticus DNA, BAC clone: B6Ng01-157K03, 5' end.DH951813|Mus musculus domesticus DNA, BAC clone: B6Ng01-157K03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatttgaaatcctacagttgtagtgaaaaaacaagagataagtg
agtttttcccacatactgttctcttttgggaaaaatatattcttcctttt
aaaaatatttaagtatttatcttgtcccattttctttgaactttaataat
gaagccacacagttatccttacagtgcatgcttcctttgttttagcaata
attttcccattgctgttagagctggagagccaggcttccttcttttcctt
tttatttctgtagtcccaaactctgcctcagcactttttactttttccca
catggttagaaggaaaggtggtttgcccctctcacattgtttctgtggct
aatttgacatgtgtcatgggcagttcatttgccttaaactaattgccagt
agttcttagcttttgccagaaatgtggaggccaggcagtgtatcttaaac
tgaaaaatgagttccaccctgtcttatccagtgttctattgctgtgaaga
gcaatggtaaattttataaaggaaagcatttagttggggcttgcttacag
tttcagaagtttagaccattatcatcatgggaggaagcatggcagcaagc
aggaagacacagtgctggagaaggagctgagttctacatccagattcaca
ggcagcagggaaagagactctgggcctggcttgagcatttgaaaccccaa
agcccaacccccagtgatgtacttcctccagtaggccacacctactccca
caaggccacaccctctaatccctgtcaagtggtaccactttctaatgacc
aaacattgaaaatggtaagcttatggggactatccagatcgccacacaca
ctcagcccactttttgatttactcatggctttcctagagtggttgttgta
ctgaaactgactaggggttagtaaggggataagctctcttagtctgtctg
atagccattgtttccctaatttcagtcatttaacctgagccaagacagta
gaaaagactgttgactggcaaatggccatggaaaataacaggcaggctgc
tgcttgacagagaacgctgtgaccctcctctgtacgtagcttaccaaaca
ctcat
gaattctctttttagctctgtagcccaatctttcattgggatatttggat
tgttggtgtctaatttttgagctctttatatattttagatattagccctc
tgtcaaatatggggttggagaagatcttttcctaatctgcaggctgtaat
tttgtcatattgacagtgttctttgacttataggagctttccagttatca
tgaggacccattaactcaaagaaatcagttgtcctcctttatacaaacaa
taaatgggctgaaaaagaagttagggaaacaataccccccacaataacca
caaataatataaaaaatcttggtgtagctctaaccaagcaagtgaaagac
ctttatgataagaacttcaagtctctgaagaaagaaattgaggaagatat
cagaaaatggaaagatctttcctgatcatggaaggtttaacataatgaaa
atggccaacttatcccaacatggttatttacagatcctgaaaggatgatt
cttaacttcacttgaaaaaaaaacagaataagtaaaacaatcctgaacaa
taaaagatcttctggaggtatcaccatccctgacctcaaggtgtactaca
aagcaatagtaattaacactgcattgtagtgatacagcgacaggttgatg
aaatgaatccatttgaagacccagaaataaaccatcacatgtatggacat
ttgatttttgacaaagaagccaaactagacaatggaaaaaggatagcatc
tatcttcaacaaatgattctggtctaactgtatgtttgcatgtagaagaa
tacaaatagatccatatttatcaccctggacaaaactcaagtccaaatgg
aatcaaaaatctcacataaaccgaatacactaatctaatggaacagaaag
tgggaatagtcttgactcattgatacagagacactttctacacaaaacac
caatcgctcagcactagatagcctcatgtatttcgagagaataaataaca
cttgcatcagattcattcacagtagactcactagatagctcagggaatcc
tgtaagttgtagctgtcatcgaccaaccttgtgaattaattctgagatta
gattctgttaaacaggcaatatgaacgttagtaggcgtatctatcctgaa
aggcctaagaacactatggctcgtgtctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_27246573_27247684
seq2: B6Ng01-157K03.b_47_1151

seq1  GAATTCAATTTGAAATCCTACAGTTGTAGTGAAAAAACAAGAGATAAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTTGAAATCCTACAGTTGTAGTGAAAAAACAAGAGATAAGTG  50

seq1  AGTTTTTCCCACATACTGTTCTCTTTTGGGAAAAATATATTCTTCCTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTCCCACATACTGTTCTCTTTTGGGAAAAATATATTCTTCCTTTT  100

seq1  AAAAATATTTAAGTATTTATCTTGTCCCATTTTCTTTGAACTTTAATAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATTTAAGTATTTATCTTGTCCCATTTTCTTTGAACTTTAATAAT  150

seq1  GAAGCCACACAGTTATCCTTACAGTGCATGCTTCCTTTGTTTTAGCAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCACACAGTTATCCTTACAGTGCATGCTTCCTTTGTTTTAGCAATA  200

seq1  ATTTTCCCATTGCTGTTAGAGCTGGAGAGCCAGGCTTCCTTCTTTTCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCCATTGCTGTTAGAGCTGGAGAGCCAGGCTTCCTTCTTTTCCTT  250

seq1  TTTATTTCTGTAGTCCCAAACTCTGCCTCAGCACTTTTTACTTTTTCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCTGTAGTCCCAAACTCTGCCTCAGCACTTTTTACTTTTTCCCA  300

seq1  CATGGTTAGAAGGAAAGGTGGTTTGCCCCTCTCACATTGTTTCTGTGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTTAGAAGGAAAGGTGGTTTGCCCCTCTCACATTGTTTCTGTGGCT  350

seq1  AATTTGACATGTGTCATGGGCAGTTCATTTGCCTTAAACTAATTGCCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGACATGTGTCATGGGCAGTTCATTTGCCTTAAACTAATTGCCAGT  400

seq1  AGTTCTTAGCTTTTGCCAGAAATGTGGAGGCCAGGCAGTGTATCTTAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTAGCTTTTGCCAGAAATGTGGAGGCCAGGCAGTGTATCTTAAAC  450

seq1  TGAAAAATGAGTTCCACCCTGTCTTATCCAGTGTTCTATTGCTGTGAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAATGAGTTCCACCCTGTCTTATCCAGTGTTCTATTGCTGTGAAGA  500

seq1  GCAATGGTAAATTTTATAAAGGAAAGCATTTAGTTGGGGCTTGCTTACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGGTAAATTTTATAAAGGAAAGCATTTAGTTGGGGCTTGCTTACAG  550

seq1  TTTCAGAAGTTTAGACCATTATCATCATGGGAGGAAGCATGGCAGCAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGAAGTTTAGACCATTATCATCATGGGAGGAAGCATGGCAGCAAGC  600

seq1  AGGAAGACACAGTGCTGGAGAAGGAGCTGAGTTCTACATCCAGATTCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGACACAGTGCTGGAGAAGGAGCTGAGTTCTACATCCAGATTCACA  650

seq1  GGCAGCAGGGAAAGAGACTCTGGGCCTGGCTTGAGCATTTGAAACCCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCAGGGAAAGAGACTCTGGGCCTGGCTTGAGCATTTGAAACCCCAA  700

seq1  AGCCCAACCCCCAGTGATGTACTTCCTCCAGTAGGCCACACCTACTCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAACCCCCAGTGATGTACTTCCTCCAGTAGGCCACACCTACTCCCA  750

seq1  CAAGGCCACACCCTCTAATCCCTGTCAAGTGGTACCACTTTCTAATGACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCCACACCCTCTAATCCCTGTCAAGTGGTACCACTTTCTAATGACC  800

seq1  AAACATTGAAAATGGTAAGCTTATGGGGACTATCCAGATCGCCACACACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTGAAAATGGTAAGCTTATGGGGACTATCCAGATCGCCACACACA  850

seq1  CTCAGCCCACTTTTTGATTTTACTCATGGCTTTCCTAGAGTGGTTGTTGT  900
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTCAGCCCACTTTTTGA-TTTACTCATGGCTTTCCTAGAGTGGTTGTTGT  899

seq1  ACTGAAAACTGACTAGGGGTTAGTAAGGGGATAAGGCTCTCTTAGTCTGT  950
      |||| ||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACTG-AAACTGACTAGGGGTTAGTAAGGGGATAA-GCTCTCTTAGTCTGT  947

seq1  CTGATAGCCATTGTTTCCCTAATTTCAGTCATTTAACCTGGAGGCAAGAC  1000
      ||||||||||||||||||||||||||||||||||||||| ||| ||||||
seq2  CTGATAGCCATTGTTTCCCTAATTTCAGTCATTTAACCT-GAGCCAAGAC  996

seq1  AGTAGAAAGTACTGTTTGACTGGCAAATGGCCATGG-AAATAACAGGCAG  1049
      ||||||||  |||| ||||||||||||||||||||| |||||||||||||
seq2  AGTAGAAAAGACTG-TTGACTGGCAAATGGCCATGGAAAATAACAGGCAG  1045

seq1  GCTGCTGTCTGACGAGAGCACGCTTGTCACTCCTCTCTGTACGTTAGCTT  1099
      |||||||  |||| |||| |||| ||| || |  ||||||||| ||||||
seq2  GCTGCTGCTTGAC-AGAGAACGC-TGTGACCCTCCTCTGTACG-TAGCTT  1092

seq1  ACCAAACACTCAT  1112
      |||||||||||||
seq2  ACCAAACACTCAT  1105