BAC Information

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BAC

Clone NameB6Ng01-157L08
Chromosome8 (Build37)
Map Location 52,296,411 - 52,297,596
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039954, LOC100039966
Downstream geneLOC667517, LOC623872, LOC100040220
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157L08.bB6Ng01-157L08.g
ACCDH951869DH951870
length1,1631,237
definitionDH951869|Mus musculus domesticus DNA, BAC clone: B6Ng01-157L08, 5' end.DH951870|Mus musculus domesticus DNA, BAC clone: B6Ng01-157L08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaatagtcacaaataaaaataaaaaaaattcttggcaaaacta
taactaagcaagggaaacatgtgtatgtcgagaaattcaagtctttggat
aaggaaattgaagaagacattagatgctagaaagatatcccatgctcacc
tattggtagacataccagtgcaaatgaccatcttatgaaatgcaatctac
agactcaacacaatccctataaaaattctttataaagtcttggaataaca
atacacagcttcctatggaaaaacaaaaaacccaggataactgaaacagt
caagtaagatgaaagaactttcatatcaccatccctgatttcatgctgta
ctacaaagccataataataaaaacctcatgatattggactaaaaacaaag
atgttgattaatggaatccaattaaagacatggacacaaattcacacacc
tatagacacttgattttgagaatgaatccagaattatgaaatggaataat
aatgcatcttcataaaatggaatgttattattttcaaaagaattacctcc
tgcctctttcaatgataattttgacataagctaggcaattattacattaa
aaaaacctgttccatgccaaatactaagaagctttaacaattgtaaagta
aacattacataattaataaattacatttttggtaatacttttagtagctt
aatttgtattgtatttcaaaaaaacatttcatgtttagaaaatattaata
tttagcaaattatatggtatgtttgtcttcttaaatattagcaagttgag
tgtcaaaaatatgatgacactaaatgacttattacatctgctacttataa
agttagcacaaaaaaatgaacatcaaactttaattcatttaaattcctag
aactaattcattttatttctttaataagaaccaaattaattttaaatagt
cattcaagtattttcatgagagcagctgcacactgaattcagaagagaca
ctagcatcagggaaagcgagctacatcatctactatgtcagctcatctga
gcgctgaatctgtctctcatcagcaccagaagtaatattcacttagtagc
tcaaaccctatagctggggagagagctgacaattcttgaatgtaattcac
gcaacagcttgca
gaattctccgctaaaaccaactggtcctgggatttttttggctgggagac
tttcatgactgcttctatttcattagggtttataggactatttaaatagt
ttacttgatactgatttaatattggtaaatgatatgtatctaaaaaatca
tcaatttcatttaaactttccaatttttatagcacaggcttttgaagtaa
aatctaatgatttttgaatttcctcagtatctttgttttgtaccctttca
tttctgattttgttaatttggattctgcctctctgccatttacttagttt
ggctaatggtttgtctatcttgttgatttcctcaaagaaccagctcttag
attccttgaatttttgtattgttatcttcctttctaatttattgaattca
tctctgagtttgattatatccagctatgtggtcaataaattttcagccta
tctttaataaattttcagcctttcctatagcccaaccatcaccagaggta
gtagaagagaaaagttattaggataagggggaagtgaacctatttagcaa
cagttctttgggggcaaactaaatcttctttgtcaacatttcaataccat
agcaaacaccaaatacaaatcagaagctgtagtccagtcctcttggaagg
cagacactaggaaagaaacagtagctgaaattcaattctctcagcagact
aactccacatacttcagaaccatctattcctcttgagtatgattcttgct
ttctttttcgttttattttaataggtattttcttcgtttacatttccaat
gctatcccaaaagtcccccatgccccccccccactcccctacccacctac
tcccacttcttggccctggcattcccctgtactgaggcatgtaaagtttg
cagaccaatcgcctctctttcactgatggctgactaggtcatcttctgat
acatatgcagctagagacagagctttgggtgtactggttagtttatatgt
gttcctctatagggtgcagatccctttttcttcttgggtccttcccagct
cctccactggaggcctgtgtatcatcaatacgactgtgagattcacttct
gtgttttcaggcctggcaagcctcagaagcagacataccgggtatcacat
ctgcaagtagcagatgcgaacttgacgattggaacgaccgagatggactc
agaatccattctccagatcactgtcaattcctctcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_52296411_52297596
seq2: B6Ng01-157L08.b_67_1208

seq1  AAAAATAAAAAAAATTCTTGGCAAAACTATAACTAAGCAAGGGAAACATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAAAAAAATTCTTGGCAAAACTATAACTAAGCAAGGGAAACATG  50

seq1  TGTATGTCGAGAAATTCAAGTCTTTGGATAAGGAAATTGAAGAAGACATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTCGAGAAATTCAAGTCTTTGGATAAGGAAATTGAAGAAGACATT  100

seq1  AGATGCTAGAAAGATATCCCATGCTCACCTATTGGTAGACATACCAGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTAGAAAGATATCCCATGCTCACCTATTGGTAGACATACCAGTGC  150

seq1  AAATGACCATCTTATGAAATGCAATCTACAGACTCAACACAATCCCTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACCATCTTATGAAATGCAATCTACAGACTCAACACAATCCCTATA  200

seq1  AAAATTCTTTATAAAGTCTTGGAATAACAATACACAGCTTCCTATGGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCTTTATAAAGTCTTGGAATAACAATACACAGCTTCCTATGGAAA  250

seq1  AACAAAAAACCCAGGATAACTGAAACAGTCAAGTAAGATGAAAGAACTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAAACCCAGGATAACTGAAACAGTCAAGTAAGATGAAAGAACTTT  300

seq1  CATATCACCATCCCTGATTTCATGCTGTACTACAAAGCCATAATAATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCACCATCCCTGATTTCATGCTGTACTACAAAGCCATAATAATAAA  350

seq1  AACCTCATGATATTGGACTAAAAACAAAGATGTTGATTAATGGAATCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCATGATATTGGACTAAAAACAAAGATGTTGATTAATGGAATCCAA  400

seq1  TTAAAGACATGGACACAAATTCACACACCTATAGACACTTGATTTTGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGACATGGACACAAATTCACACACCTATAGACACTTGATTTTGAGA  450

seq1  ATGAATCCAGAATTATGAAATGGAATAATAATGCATCTTCATAAAATGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATCCAGAATTATGAAATGGAATAATAATGCATCTTCATAAAATGGA  500

seq1  ATGTTATTATTTTCAAAAGAATTACCTCCTGCCTCTTTCAATGATAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATTATTTTCAAAAGAATTACCTCCTGCCTCTTTCAATGATAATTT  550

seq1  TGACATAAGCTAGGCAATTATTACATTAAAAAAACCTGTTCCATGCCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATAAGCTAGGCAATTATTACATTAAAAAAACCTGTTCCATGCCAAA  600

seq1  TACTAAGAAGCTTTAACAATTGTAAAGTAAACATTACATAATTAATAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAGAAGCTTTAACAATTGTAAAGTAAACATTACATAATTAATAAAT  650

seq1  TACATTTTTGGTAATACTTTTAGTAGCTTAATTTGTATTGTATTTCAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTTTGGTAATACTTTTAGTAGCTTAATTTGTATTGTATTTCAAAA  700

seq1  AAACATTTCATGTTTAGAAAATATTAATATTTAGCAAATTATATGGTATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTTCATGTTTAGAAAATATTAATATTTAGCAAATTATATGGTATG  750

seq1  TTTGTCTTCTTAAATATTAGCAAGTTGAGTGTCAAAAATATGATGACACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTCTTAAATATTAGCAAGTTGAGTGTCAAAAATATGATGACACT  800

seq1  AAATGACTTATTACATCTGCTACTTATAAAGTTAGCACAAAAAAATGAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACTTATTACATCTGCTACTTATAAAGTTAGCACAAAAAAATGAAC  850

seq1  ATCAAACTTTAATTCATTTAAATTCCTAGAACTAATTCATTTTATTTCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAACTTTAATTCATTTAAATTCCTAGAACTAATTCATTTTATTTCTT  900

seq1  TAATAAAGAACCAAATTAATTTTAAATAGTCATTCAAGTATTTTCATGAA  950
      |||| ||||||||||||||||||||||||||||||||||||||||||| |
seq2  TAAT-AAGAACCAAATTAATTTTAAATAGTCATTCAAGTATTTTCATG-A  948

seq1  GAGCAGGCCTGCACACTGAATTCAAGAAAGAGACACTAAGCATCCAGGGA  1000
      ||||||  ||||||||||||||||   |||||||||| ||||| ||||||
seq2  GAGCAG--CTGCACACTGAATTCA--GAAGAGACACT-AGCAT-CAGGGA  992

seq1  AAGCCGAGCTACAATCATTCTACCTATGTTCCAGGCTCAATCTGGAAGCC  1050
      ||| |||||||| |||| |||| ||||||  || |||| |||||  || |
seq2  AAG-CGAGCTAC-ATCA-TCTA-CTATGT--CA-GCTC-ATCTG--AG-C  1031

seq1  GCTGAAATTCCTGTCTTCCTCCATCCAAAGCACCCAGGAAAGTAATATTT  1100
      ||||||    ||||||  || ||||   |||| ||||  |||||||| ||
seq2  GCTGAA---TCTGTCT--CT-CATC---AGCA-CCAG--AAGTAATA-TT  1068

seq1  CACCTTAGTAGCTCCAAAACACTATAGCCTGTGGAGAGAGTCTGACCAAA  1150
      || |||||||||||  |||| |||||| ||| |||||||| |||||  ||
seq2  CA-CTTAGTAGCTC--AAACCCTATAG-CTGGGGAGAGAG-CTGAC--AA  1111

seq1  TACCCTGAATGTAATATTTCAACGCAACAGCTTGCA  1186
      |  | |||||||||   ||| |||||||||||||||
seq2  T-TCTTGAATGTAA---TTC-ACGCAACAGCTTGCA  1142