BAC Information

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BAC

Clone NameB6Ng01-157N14
Chromosome8 (Build37)
Map Location 102,984,867 - 103,096,112
singlet/doubletdoublet
Overlap geneLOC100042086
Upstream geneLOC667531, LOC100042069, LOC436054, LOC100042078
Downstream geneLOC100042092, LOC384895
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157N14.bB6Ng01-157N14.g
ACCDH951969DH951970
length1,1101,004
definitionDH951969|Mus musculus domesticus DNA, BAC clone: B6Ng01-157N14, 5' end.DH951970|Mus musculus domesticus DNA, BAC clone: B6Ng01-157N14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,984,867 - 102,985,989)(103,095,596 - 103,096,112)
sequence
gaattctccactcttttataacttctcattttaaatatgtcagtggacat
tgtaagtccaatagaatgaaagcaaaacctgataaggagattcttttttt
caaggtacagaatcatattttcattttctcacatttctatttatagattg
ttatttccatcaagtgcattaaaaactctctttttaccacttcttcacct
tcttctttttcttttttctctcctattaacatgaccccaatcacaggcac
atgaatgtccatgtgtgcatgtgcacacacacaaaatttacacgcatatg
tatacacacatatacatccattatctttaaccatgtctaggctactaggg
atatgaagaaagatgttttctttctggttagtgtgcagtcctgagggaag
cacacagcctccagctcgtcttgccattaagctgtgttcatgatcccaca
gtgtcctttccaatctgagatctgaggagctgccatatgacagctcagtt
tcctcatctataatgcatagattctggtgtcatcttgaaacacagttgtg
aatgctgaatggaaagagcaatatttacactggatgaaacatatttgata
ttttcaaaggttaatatcttccctcccctccctttgtccttactcttgca
atatatagaagactgaatatcttgcctgctgtttctttgggtgagtgaag
aaagaacttttaacacacctctggttctcgcttccacattcacagatgag
ttgtacttctctaatataggggaatttatataacagaggaaatctatact
gttacagattggaaggaagtcatttccatttaactctaaaaagtccttaa
tttctttctttattccttccttgaccaaggtatcattgagaagagtgttg
ttcagtttccacgtgaatgttgtctttctattattatgttgttattgaag
atcagccttagtccatggtgatctgataggatgcatgggacaatttcata
tttttgtatttagtaaattttttcttccctgatttcattttgatttattt
tccttataaccttctcagttccttttctttttaatggtgtcactccatct
gatgagcttg
gaattcagtacactcaaggaactataaatgctctcaaaatcattttataa
acaaacttctgtttataaaatggcattaaatttgtatgccataattagta
ttacacaaagctagaggatctttctaataaaaaacatcaatacttagtga
gtgacatactatgacagaacaatatatcaaacaaatgatttattgtatta
tggagaaggtacaattttgatttagaaaggctggcttttacctaatatgg
taaatctggatacagtcaacaaggttttaagtcaaaacctttaacctgat
ctgcaggctaacagttttaatgaaattaagcgaatacttttattaaaacc
cattttgaaggattttttcattaatttattaactttatgtatgtcccaat
atcagcccccactcccagactccctctcacaaagctcctccccaaaccat
tgtgcctgctatcaccctaccctagcacatcaaatcactgcaggactagg
aacatcctcttccactgagtcaagacaagtggcagaccagtgattcaggg
acagccctactccagttattgaggaaccctcataaacaccaagctccaca
tatgtatatggggtctaggttcagcccatacttgctctctggttggttgt
tcagtctctgggggcccacaaggttccaggttagttgacttttgtttgtt
ttcctgtggagttcctatcttcttctagtccttcaatcttcccaccaact
cttccataagactcctctgagagccatgtaatagttgactgtggatttct
gaatctattcaaataggctctggggaaagcctttcaggagacagttatcc
tgtctgcaagtaaaacagagtatcattaataatgtcaggtattcattctt
gcctacagatgggtctcaatttggggcagtcattggtcagcccatactct
atcttgctcatctttgtctgtacatcctgtagcaggacacatttgggtca
tgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_102984867_102985989
seq2: B6Ng01-157N14.b_48_1157

seq1  GAATTCTCCACTCTTTTATAACTTCTCATTTTAAATATGTCAGTGGACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCACTCTTTTATAACTTCTCATTTTAAATATGTCAGTGGACAT  50

seq1  TGTAAGTCCAATAGAATGAAAGCAAAACCTGATAAGGAGATTCTTTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTCCAATAGAATGAAAGCAAAACCTGATAAGGAGATTCTTTTTTT  100

seq1  CAAGGTACAGAATCATATTTTCATTTTCTCACATTTCTATTTATAGATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTACAGAATCATATTTTCATTTTCTCACATTTCTATTTATAGATTG  150

seq1  TTATTTCCATCAAGTGCATTAAAAACTCTCTTTTTACCACTTCTTCACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCCATCAAGTGCATTAAAAACTCTCTTTTTACCACTTCTTCACCT  200

seq1  TCTTCTTTTTCTTTTTTCTCTCCTATTAACATGACCCCAATCACAGGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTTTCTTTTTTCTCTCCTATTAACATGACCCCAATCACAGGCAC  250

seq1  ATGAATGTCCATGTGTGCATGTGCACACACACAAAATTTACACGCATATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGTCCATGTGTGCATGTGCACACACACAAAATTTACACGCATATG  300

seq1  TATACACACATATACATCCATTATCTTTAACCATGTCTAGGCTACTAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACACACATATACATCCATTATCTTTAACCATGTCTAGGCTACTAGGG  350

seq1  ATATGAAGAAAGATGTTTTCTTTCTGGTTAGTGTGCAGTCCTGAGGGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAAGAAAGATGTTTTCTTTCTGGTTAGTGTGCAGTCCTGAGGGAAG  400

seq1  CACACAGCCTCCAGCTCGTCTTGCCATTAAGCTGTGTTCATGATCCCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGCCTCCAGCTCGTCTTGCCATTAAGCTGTGTTCATGATCCCACA  450

seq1  GTGTCCTTTCCAATCTGAGATCTGAGGAGCTGCCATATGACAGCTCAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCTTTCCAATCTGAGATCTGAGGAGCTGCCATATGACAGCTCAGTT  500

seq1  TCCTCATCTATAATGCATAGATTCTGGTGTCATCTTGAAACACAGTTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATCTATAATGCATAGATTCTGGTGTCATCTTGAAACACAGTTGTG  550

seq1  AATGCTGAATGGAAAGAGCAATATTTACACTGGATGAAACATATTTGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGAATGGAAAGAGCAATATTTACACTGGATGAAACATATTTGATA  600

seq1  TTTTCAAAGGTTAATATCTTCCCTCCCCTCCCTTTGTCCTTACTCTTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAAGGTTAATATCTTCCCTCCCCTCCCTTTGTCCTTACTCTTGCA  650

seq1  ATATATAGAAGACTGAATATCTTGCCTGCTGTTTCTTTGGGTGAGTGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAGAAGACTGAATATCTTGCCTGCTGTTTCTTTGGGTGAGTGAAG  700

seq1  AAAGAACTTTTAACACACCTCTGGTTCTCGCTTCCACATTCACAGATGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACTTTTAACACACCTCTGGTTCTCGCTTCCACATTCACAGATGAG  750

seq1  TTGTACTTCTCTAATATAGGGGAATTTATATAACAGAGGAAATCTATACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACTTCTCTAATATAGGGGAATTTATATAACAGAGGAAATCTATACT  800

seq1  GTTACAGATTGGAAGGAAGTCATTTCCATTTAACTCTAAAAAGTCCTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAGATTGGAAGGAAGTCATTTCCATTTAACTCTAAAAAGTCCTTAA  850

seq1  TTTCTTTCTTTATTCCTTCCTTGACCAAGGTATCATTGAGAAGAGTGTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTATTCCTTCCTTGACCAAGGTATCATTGAGAAGAGTGTTG  900

seq1  TTCAGTTTCCACGTGAATGTTGTCTTTCTATTATTTATGTTGTTATTGAA  950
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTCAGTTTCCACGTGAATGTTGTCTTTCTATTA-TTATGTTGTTATTGAA  949

seq1  GATCAGCCTTAGTCCATGGTGATCTGATAGGATGCATGGGACAATTTCAA  1000
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GATCAGCCTTAGTCCATGGTGATCTGATAGGATGCATGGGACAATTTC-A  998

seq1  TATTTTTGTATTTAGTAAATTTTTTCTTCCCTGATTTCATTTTTGTATTT  1050
      ||||||||||||||||||||||||||||||||||||||||||   |  ||
seq2  TATTTTTGTATTTAGTAAATTTTTTCTTCCCTGATTTCATTT---TGATT  1045

seq1  TATTTTCCTTATTACCTTTCTCAATTTCTTTTCTTTTTAATTGTGTTGGT  1100
      |||||||||||| ||| |||||| || |||||||||||||| ||    ||
seq2  TATTTTCCTTATAACC-TTCTCAGTTCCTTTTCTTTTTAATGGT----GT  1090

seq1  CACTTCATTCTTGAATGAGCTTG  1123
      |||| || |||   |||||||||
seq2  CACTCCA-TCT--GATGAGCTTG  1110

seq1: chr8_103095596_103096112
seq2: B6Ng01-157N14.g_67_583 (reverse)

seq1  CAGTGGAAGAGGATGTTCCTAGTCCTGCAGTGATTTGATGTGCTAGGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAGAGGATGTTCCTAGTCCTGCAGTGATTTGATGTGCTAGGGTA  50

seq1  GGGTGATAGCAGGCACAATGGTTTGGGGAGGAGCTTTGTGAGAGGGAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGATAGCAGGCACAATGGTTTGGGGAGGAGCTTTGTGAGAGGGAGTC  100

seq1  TGGGAGTGGGGGCTGATATTGGGACATACATAAAGTTAATAAATTAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGTGGGGGCTGATATTGGGACATACATAAAGTTAATAAATTAATGA  150

seq1  AAAAATCCTTCAAAATGGGTTTTAATAAAAGTATTCGCTTAATTTCATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCCTTCAAAATGGGTTTTAATAAAAGTATTCGCTTAATTTCATTA  200

seq1  AAACTGTTAGCCTGCAGATCAGGTTAAAGGTTTTGACTTAAAACCTTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTTAGCCTGCAGATCAGGTTAAAGGTTTTGACTTAAAACCTTGTT  250

seq1  GACTGTATCCAGATTTACCATATTAGGTAAAAGCCAGCCTTTCTAAATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTATCCAGATTTACCATATTAGGTAAAAGCCAGCCTTTCTAAATCA  300

seq1  AAATTGTACCTTCTCCATAATACAATAAATCATTTGTTTGATATATTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTACCTTCTCCATAATACAATAAATCATTTGTTTGATATATTGTT  350

seq1  CTGTCATAGTATGTCACTCACTAAGTATTGATGTTTTTTATTAGAAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCATAGTATGTCACTCACTAAGTATTGATGTTTTTTATTAGAAAGAT  400

seq1  CCTCTAGCTTTGTGTAATACTAATTATGGCATACAAATTTAATGCCATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAGCTTTGTGTAATACTAATTATGGCATACAAATTTAATGCCATTT  450

seq1  TATAAACAGAAGTTTGTTTATAAAATGATTTTGAGAGCATTTATAGTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACAGAAGTTTGTTTATAAAATGATTTTGAGAGCATTTATAGTTCC  500

seq1  TTGAGTGTACTGAATTC  517
      |||||||||||||||||
seq2  TTGAGTGTACTGAATTC  517