BAC Information

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BAC

Clone NameB6Ng01-158D19
Chromosome8 (Build37)
Map Location 86,705,951 - 86,707,039
singlet/doubletsinglet
Overlap genenone
Upstream geneTbc1d9, Ucp1, Elmod2, 4933434I20Rik, Clgn, Scoc, LOC546077, LOC675854, Olfr370, Ndufb7, Gpsn2, Dnajb1, Gipc1, Ptger1, Pkn1, Ddx39, Cd97, EG384857, Lphn1, Asf1b, Prkaca, Samd1, 1700067K01Rik, 2210011C24Rik, 4432412L15Rik, Il27ra, Rln3, C330011M18Rik, Rfx1, BC057552, LOC100039920, Podnl1, Cc2d1a, 4930432K21Rik, Nanos3
Downstream geneZswim4, D8Ertd738e, 2410018C20Rik, Ccdc130, Cacna1a, Ier2, LOC100039975, Btbd14b, Trmt1, LOC100039997, Lyl1, Nfix, Dand5, Gadd45gip1, Rad23a, Calr, LOC546080, Farsa, Syce2, Gcdh, Klf1, Dnase2a, Mast1, Rtbdn, Rnaseh2a, LOC666841, Prdx2, Junb, Hook2, Best2, Asna1, 2310036O22Rik, Tnpo2, Fbxw9, EG436049, Dhps, 1500041N16Rik, BC056474, Man2b1, EG244556, EG624855
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158D19.bB6Ng01-158D19.g
ACCDH952246DH952247
length1,0861,136
definitionDH952246|Mus musculus domesticus DNA, BAC clone: B6Ng01-158D19, 5' end.DH952247|Mus musculus domesticus DNA, BAC clone: B6Ng01-158D19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactgtgagtcataggtgtgtcccataataactgctcaataagtg
ttgctggacacagtggctgtagagcctatcacctctgtacctggcagatg
caggccaatcttaaaaaaaaaaaaaaaaaaaaaaaggctgggcatggtgt
tgaatgactttaataatcccagcactcaagaggctgaggcagacagatct
ctcaatttgagaccagcctgatctatacataaagtttcagtccaggcagg
gctctacatcccaagactctgtttcagtaaaaacaacaaaatattgcatt
tttgactctacctctgagtgtcctttccctgtgggtctatgtctttatgt
atgcaagtgaccgttactgtcctcagacatccatgccagtaggtgggtaa
gctccattgtttgtttgtttgtttgttttgacttcgagaaccaaacccca
gggccctgtgatcctgccagatcagcaaagcgctttaccattaagcaaca
tccatgctcagctcacttttgatgttgatctttgtctaggtttgtttgct
gtttgagatggtgttccccagtatacccctggttggcctggaactcagta
tatagatcaggctgtccaggaactcagaatacctgcctgcttctccctcc
cagatgtgagattaaaactgtgctctatcacttctgggctccactgttct
taaagacagagtctctaaattgcccaggaagacctcaggttcactctgaa
actcaagtaggctttgagcttcccatcctcctgtctcactctcccaaggg
ctaggaggactggcctgtgccaccaggtctacttccataaggagtcatgg
ctttatgagtgactgtctctatgggtatctgtgtcaacatgcacacctgt
gttctggtgtttctgtgtcagatagctgggaccggctttgagctcacgag
gggtgtctttattgcacaccaagttactacagggaccgtcctgcacctgt
ggttgtcagttattctagaagtgtgagtgaccaggtgagggttggcacta
ccagtgtggtgtgtctcttcatgtggctaaccttcc
gaattcttggaatttttcagagagtatgtaaatgcttaagccctgatagg
caacatgggttgtagactgttccagggggctggttggagtatgaaagatg
cacggttctctatctctcccctctgccctttctttcctatctagtggcag
aaggtgaaaccaggaggataaagaatggggaaagaagaacccacaaagta
gcaaatattgggtacaactagatagtgacccaatagagtgattgaataaa
cagatgaccacaaagaaaaatcacctgaagaagcagaagaaatagacaga
aattggtatcaggagtggggtgttgctatgatagttctgtcatccatgta
tttttagaaggattttggtggcatttcaactttgggctgggaaagccatt
gagttctcagaactcagtggactgtttctgtgggaccttgggagatagta
atactgaaagcagtacagatgataggagtctggcttgtgaagtttcagaa
ggaagttttcaaagactattggggccattcagcattttgaattaaaaacc
tgtgatctggtcttctggggctgaagaatcagctgtgattgacaaatatc
agaaccactaaagttaaacctttgctgtgctgggacaatcaatactggtc
aggtggggctaaagaataggctgtgattaagaagagatcagcatcattga
ggtgatatcttttgggaagtgttttctcaaggtaagcacatagaagctgt
ggtccagagggagccaaagttgcatcatatgctggtaactgaacttggta
atgtaagagtttccttcccaggtggtattgggtttgaagccatgagggaa
ctcatggcaaacagttaaagcttggtaccatgagagtccagaagaggcca
ctggtgaaggagagaatcagttgcagtagaagctccagatttacgactcg
tgagagagatgaggcttagaccatgtggcagttcagaatcctcacagagc
ccagagagactattgatgaggtgtagctggatgcatgagaccagcaattg
gactcattaccttatggatgatcatcgaggctgtgccactgtggagtgga
cagcctagccgggaaacgctgcaacactggtggaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_86705951_86707039
seq2: B6Ng01-158D19.b_49_1134

seq1  GAATTCACTGTGAGTCATAGGTGTGTCCCATAATAACTGCTCAATAAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTGAGTCATAGGTGTGTCCCATAATAACTGCTCAATAAGTG  50

seq1  TTGCTGGACACAGTGGCTGTAGAGCCTATCACCTCTGTACCTGGCAGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGACACAGTGGCTGTAGAGCCTATCACCTCTGTACCTGGCAGATG  100

seq1  CAGGCCAATCTTAAAAAAAAAAAAAAAAAAAAAAAGGCTGGGCATGGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCAATCTTAAAAAAAAAAAAAAAAAAAAAAAGGCTGGGCATGGTGT  150

seq1  TGAATGACTTTAATAATCCCAGCACTCAAGAGGCTGAGGCAGACAGATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGACTTTAATAATCCCAGCACTCAAGAGGCTGAGGCAGACAGATCT  200

seq1  CTCAATTTGAGACCAGCCTGATCTATACATAAAGTTTCAGTCCAGGCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATTTGAGACCAGCCTGATCTATACATAAAGTTTCAGTCCAGGCAGG  250

seq1  GCTCTACATCCCAAGACTCTGTTTCAGTAAAAACAACAAAATATTGCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTACATCCCAAGACTCTGTTTCAGTAAAAACAACAAAATATTGCATT  300

seq1  TTTGACTCTACCTCTGAGTGTCCTTTCCCTGTGGGTCTATGTCTTTATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTCTACCTCTGAGTGTCCTTTCCCTGTGGGTCTATGTCTTTATGT  350

seq1  ATGCAAGTGACCGTTACTGTCCTCAGACATCCATGCCAGTAGGTGGGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAGTGACCGTTACTGTCCTCAGACATCCATGCCAGTAGGTGGGTAA  400

seq1  GCTCCATTGTTTGTTTGTTTGTTTGTTTTGACTTCGAGAACCAAACCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCATTGTTTGTTTGTTTGTTTGTTTTGACTTCGAGAACCAAACCCCA  450

seq1  GGGCCCTGTGATCCTGCCAGATCAGCAAAGCGCTTTACCATTAAGCAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCTGTGATCCTGCCAGATCAGCAAAGCGCTTTACCATTAAGCAACA  500

seq1  TCCATGCTCAGCTCACTTTTGATGTTGATCTTTGTCTAGGTTTGTTTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGCTCAGCTCACTTTTGATGTTGATCTTTGTCTAGGTTTGTTTGCT  550

seq1  GTTTGAGATGGTGTTCCCCAGTATACCCCTGGTTGGCCTGGAACTCAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGATGGTGTTCCCCAGTATACCCCTGGTTGGCCTGGAACTCAGTA  600

seq1  TATAGACCAGGCTGTCCAGGAACTCAGAATACCTGCCTGCTTCTCCCTCC  650
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGATCAGGCTGTCCAGGAACTCAGAATACCTGCCTGCTTCTCCCTCC  650

seq1  CAGATGTGAGATTAAAACTGTGCTCTATCACTTCTGGGCTCCACTGTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGTGAGATTAAAACTGTGCTCTATCACTTCTGGGCTCCACTGTTCT  700

seq1  TAAAGACAGAGTCTCTAAATTGCCCAGGAAGACCTCAGGTTCACTCTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGACAGAGTCTCTAAATTGCCCAGGAAGACCTCAGGTTCACTCTGAA  750

seq1  ACTCAAGTAGGCTTTGAGCTTCCCATCCTCCTGTCTCACTCTCCCAAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAGTAGGCTTTGAGCTTCCCATCCTCCTGTCTCACTCTCCCAAGGG  800

seq1  CTAGGAGGACTGGCCTGTGCCACCAGGTCTACCTCCATAAGGAGTCATGG  850
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTAGGAGGACTGGCCTGTGCCACCAGGTCTACTTCCATAAGGAGTCATGG  850

seq1  CTTTATGAGTGACTGTCTCTATGGGTATCTGTGTCAACATGCACACCTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATGAGTGACTGTCTCTATGGGTATCTGTGTCAACATGCACACCTGT  900

seq1  GTTCTGGTGTTTCTGTGTCAGGATAGCTGGGACCGGCTTTGAGCTCACGA  950
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GTTCTGGTGTTTCTGTGTCA-GATAGCTGGGACCGGCTTTGAGCTCACGA  949

seq1  GGGGTGTCCTTATTTGCACACCAAGTTACTACAGGGACCGTCCTGCACCT  1000
      |||||||| ||| |||||||||||||||||||||||||||||||||||||
seq2  GGGGTGTCTTTA-TTGCACACCAAGTTACTACAGGGACCGTCCTGCACCT  998

seq1  GTGGTTGTCAGTTATTCTAGATGTGTGAGTGACCAGGTGAGGGTGGGCAC  1050
      ||||||||||||||||||||| |||||||||||||||||||||| |||||
seq2  GTGGTTGTCAGTTATTCTAGAAGTGTGAGTGACCAGGTGAGGGTTGGCAC  1048

seq1  TACCAGTGTGGTGTGTCTCTACATTGTGCCCAACCTTCC  1089
      |||||||||||||||||||| || |||| | ||||||||
seq2  TACCAGTGTGGTGTGTCTCTTCA-TGTGGCTAACCTTCC  1086