BAC Information

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BAC

Clone NameB6Ng01-159A23
Chromosome8 (Build37)
Map Location 85,203,011 - 85,326,126
singlet/doubletdoublet
Overlap geneLOC675800, EG666289, Zfp330
Upstream geneInpp4b, LOC671182, Il15, EG666564
Downstream geneRnf150, LOC100039688, Tbc1d9, Ucp1, Elmod2, 4933434I20Rik, Clgn, Scoc, LOC546077, LOC675854, Olfr370, Ndufb7, Gpsn2, Dnajb1, Gipc1, Ptger1, Pkn1, Ddx39, Cd97
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159A23.bB6Ng01-159A23.g
ACCDH952837DH952838
length1,1631,042
definitionDH952837|Mus musculus domesticus DNA, BAC clone: B6Ng01-159A23, 5' end.DH952838|Mus musculus domesticus DNA, BAC clone: B6Ng01-159A23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,324,966 - 85,326,126)(85,203,011 - 85,204,062)
sequence
gaattcttagcctcccaaacaccccatctcctaatactgtcccagtggag
ttaggtagcaacagatggattcccagaggacacaaacatttagttcatcc
cagtctcttttgttgaaacttttgaaaatgaagtacaaagacaacacaag
tggaactgcaaaggactccatccagaaagtacatgagcagtgagacagtg
accttttgaactggtttacatttatttttgtgcgtatgatttgtgtagga
ggaagtgtgcacaccatggcgcatgcgtagaggtcagaagatgactttca
gcagtcagagctttcattccaccatatagggcaggagatttaactccagt
cgttaggctcagccattaggcgcctttgccttaggagtcatttcatcagt
cccgagcaaacaagtcccagccatttattctattctatgggatttctcgg
ttttcattctactttaccaatgcttctaaaagaggttgagaaaaacaagt
ttctaaaaggtccagagttgtgtgtgttggaataatactccagtcatgtc
tgttgtgccaatcatggctcatttgctgtaaaagacagaaattctgattt
gtctagattaagtggcagggcaaactgctggtctactgaccgctgagcat
ggaaacagaagatgaaggaaataggcaacagaacaaatcatcacagtcaa
cttacatgacttagacacctactctctcatacttcccaaataatttcaaa
tatacaagaaattatgaggcataagtagacaaccatactgtgatttttgc
atatatctagatatataacatgacacagattgatataagttctataaata
atgcactaaattacattatttatgaaaaataatggcttctgactacaaaa
acattttctattttgtatgcaaatgttaccagctctaaataactgtcaat
acttattgcaatctaaatgccatgtaaatacttattattttgtatcattt
acggaagcaatgaaaaagtgttcttcttttgttctaacagacatgttatt
ttgaaatattttttgtcgaagatggcctgactcttgaggtgcaccccctg
gaaaatagaatggctaaaatacacctgtctctggaccttctgagatccaa
gccagcctggtct
gaattctcttttactcatcctaaactatacaaacaacccagagactcacc
tatttaaacaagacatttatcctacgtattaagtgtcttgcagggagaaa
tactggactatgtaatcaaaccacctacatctgctgatcatcaaggctat
gcattccagtgggcacctaatactactttatgccaatggtgccaggttcc
tgtgtagcacatgagtgacacacacacctagttttcaacatgataggttg
taggcatactccaatatttctgaaaatatacattgtcaaggaaaattgaa
accataaacgccttctgtgtgctagaatgtgtccttttacaactgggaaa
ccttaggttgtcttctattgtttgggtctagggttgcaacaaaggtctac
aaagagttggtagctaccatttgcccgcattgtcccatgagctaaagatc
atttttaaatttttaaatgatttttaaaacctctccggtgtttagagtat
agctcatttagtgggagatacagttagcatacatgcagcccaagattcag
ccctagtatgaaaaataaaaaaggaagaaaagataaagaaatcaaatgaa
gaaggcattgtcgggtatgaaaattatatgaactttaaattctggtaccc
aaaaaggcttgttatattattatttttcacttgagagtggtatataactg
agacagtatacacagacagtgggagctagtggactatgatataggaagag
acccctcatcttgtgatctagtttctcattcgtaagagtcaagaaacttg
aaatttcctacaggtattatgtgtattttcctgaagacttctcaaagacg
atgctagacaacaatcattgtacctacttagaactagaatgtttgtgacc
ttgaatttcacattatactgtgcttcatcttgtgatctaacatgtgccat
actcctaccaaaaaaaataaaccttatatttcatttataaagaaattctt
agaaaaaccaaaaaattccacttgcctggccttatttaattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_85324966_85326126
seq2: B6Ng01-159A23.b_51_1213 (reverse)

seq1  AGACCAGGCTGGCCTCGAACTCAGAAGGTCCAGAGCACAGCTG-ATTTTA  49
      ||||||||||||| | || |||||||||||||||| |||| || ||||||
seq2  AGACCAGGCTGGCTTGGATCTCAGAAGGTCCAGAG-ACAGGTGTATTTTA  49

seq1  GCCA-TCCATATTCAAGGGTG-CCACCTCAAGAGTCAGCCAACCTCTGAC  97
      |||| || || ||| |||| |  ||||||||||||||| | | ||  |||
seq2  GCCATTCTATTTTCCAGGGGGTGCACCTCAAGAGTCAGGCCATCTTCGAC  99

seq1  -ACAAATATTTCAAAATAACATGTCCTTGTT-GAACATA--GAGAACACT  143
       | ||||||||||||||||||||||  |||| ||||| |   ||||||||
seq2  AAAAAATATTTCAAAATAACATGTC--TGTTAGAACAAAAGAAGAACACT  147

seq1  TCTTTCATTGCTTCCCCTAAATGATACAAAATAATAAGTATTTACATGGC  193
      | ||||||||||| || |||||||||||||||||||||||||||||||||
seq2  T-TTTCATTGCTT-CCGTAAATGATACAAAATAATAAGTATTTACATGGC  195

seq1  ATTTAGATTGCAATAAGTATTGACAGTTATTTAGAGCTGGTAACATTTTG  243
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATTTAGATTGCAATAAGTATTGACAGTTATTTAGAGCTGGTAACA-TTTG  244

seq1  CATACAAAATAG-AAATGTTTTTGTAGTCAGAAGCCATTATTTTTCATAA  292
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CATACAAAATAGAAAATGTTTTTGTAGTCAGAAGCCATTATTTTTCATAA  294

seq1  ATAATGTAATTTAGTGCATTATTTATAGAACTTATATCAATCTGTGTCAT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTAATTTAGTGCATTATTTATAGAACTTATATCAATCTGTGTCAT  344

seq1  GTTATATATCTAGATATATGCAAAAATCACAGTATGGTTGTCTACTTATG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATATATCTAGATATATGCAAAAATCACAGTATGGTTGTCTACTTATG  394

seq1  CCTCATAATTTCTTGTATATTTGAAATTATTTGGGAAGTATGAGAGAGTA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATAATTTCTTGTATATTTGAAATTATTTGGGAAGTATGAGAGAGTA  444

seq1  GGTGTCTAAGTCATGTAAGTTGACTGTGATGATTTGTTCTGTTGCCTATT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCTAAGTCATGTAAGTTGACTGTGATGATTTGTTCTGTTGCCTATT  494

seq1  TCCTTCATCTTCTGTTTCCATGCTCAGCGGTCAGTAGACCAGCAGTTTGC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCATCTTCTGTTTCCATGCTCAGCGGTCAGTAGACCAGCAGTTTGC  544

seq1  CCTGCCACTTAATCTAGACAAATCAGAATTTCTGTCTTTTACAGCAAATG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCACTTAATCTAGACAAATCAGAATTTCTGTCTTTTACAGCAAATG  594

seq1  AGCCATGATTGGCACAACAGACATGACTGGAGTATTATTCCAACACACAC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATGATTGGCACAACAGACATGACTGGAGTATTATTCCAACACACAC  644

seq1  AACTCTGGACCTTTTAGAAACTTGTTTTTCTCAACCTCTTTTAGAAGCAT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGGACCTTTTAGAAACTTGTTTTTCTCAACCTCTTTTAGAAGCAT  694

seq1  TGGTAAAGTAGAATGAAAACCGAGAAATCCCATAGAATAGAATAAATGGC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAAGTAGAATGAAAACCGAGAAATCCCATAGAATAGAATAAATGGC  744

seq1  TGGGACTTGTTTGCTCGGGACTGATGAAATGACTCCTAAGGCAAAGGCGC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTTGTTTGCTCGGGACTGATGAAATGACTCCTAAGGCAAAGGCGC  794

seq1  CTAATGGCTGAGCCTAACGACTGGAGTTAAATCTCCTGCCCTATATGGTG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGGCTGAGCCTAACGACTGGAGTTAAATCTCCTGCCCTATATGGTG  844

seq1  GAATGAAAGCTCTGACTGCTGAAAGTCATCTTCTGACCTCTACGCATGCG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAAGCTCTGACTGCTGAAAGTCATCTTCTGACCTCTACGCATGCG  894

seq1  CCATGGTGTGCACACTTCCTCCTACACAAATCATACGCACAAAAATAAAT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGTGTGCACACTTCCTCCTACACAAATCATACGCACAAAAATAAAT  944

seq1  GTAAACCAGTTCAAAAGGTCACTGTCTCACTGCTCATGTACTTTCTGGAT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACCAGTTCAAAAGGTCACTGTCTCACTGCTCATGTACTTTCTGGAT  994

seq1  GGAGTCCTTTGCAGTTCCACTTGTGTTGTCTTTGTACTTCATTTTCAAAA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCCTTTGCAGTTCCACTTGTGTTGTCTTTGTACTTCATTTTCAAAA  1044

seq1  GTTTCAACAAAAGAGACTGGGATGAACTAAATGTTTGTGTCCTCTGGGAA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAACAAAAGAGACTGGGATGAACTAAATGTTTGTGTCCTCTGGGAA  1094

seq1  TCCATCTGTTGCTACCTAACTCCACTGGGACAGTATTAGGAGATGGGGTG  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCTGTTGCTACCTAACTCCACTGGGACAGTATTAGGAGATGGGGTG  1144

seq1  TTTGGGAGGCTAAGAATTC  1161
      |||||||||||||||||||
seq2  TTTGGGAGGCTAAGAATTC  1163

seq1: chr8_85203011_85204062
seq2: B6Ng01-159A23.g_64_1105

seq1  GAATTCTCTTTTACTCATCCTAAACTATACAAACAACCCAGAGACTCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTTACTCATCCTAAACTATACAAACAACCCAGAGACTCACC  50

seq1  TATTTAAACAAGACATTTATCCTACGTATTAAGTGTCTTGCAGGGAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAACAAGACATTTATCCTACGTATTAAGTGTCTTGCAGGGAGAAA  100

seq1  TACTGGACTATGTAATCAAACCACCTACATCTGCTGATCATCAAGGCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGACTATGTAATCAAACCACCTACATCTGCTGATCATCAAGGCTAT  150

seq1  GCATTCCAGTGGGCACCTAATACTACTTTATGCCAATGGTGCCAGGTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCCAGTGGGCACCTAATACTACTTTATGCCAATGGTGCCAGGTTCC  200

seq1  TGTGTAGCACATGAGTGACACACACACCTAGTTTTCAACATGATAGGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGCACATGAGTGACACACACACCTAGTTTTCAACATGATAGGTTG  250

seq1  TAGGCATACTCCAATATTTCTGAAAATATACATTGTCAAGGAAAATTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCATACTCCAATATTTCTGAAAATATACATTGTCAAGGAAAATTGAA  300

seq1  ACCATAAACGCCTTCTGTGTGCTAGAATGTGTCCTTTTACAACTGGGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATAAACGCCTTCTGTGTGCTAGAATGTGTCCTTTTACAACTGGGAAA  350

seq1  CCTTAGGTTGTCTTCTATTGTTTGGGTCTAGGGTTGCAACAAAGGTCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGGTTGTCTTCTATTGTTTGGGTCTAGGGTTGCAACAAAGGTCTAC  400

seq1  AAAGAGTTGGTAGCTACCATTTGCCCGCATTGTCCCATGAGCTAAAGATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTTGGTAGCTACCATTTGCCCGCATTGTCCCATGAGCTAAAGATC  450

seq1  ATTTTTAAATTTTTAAATGATTTTTAAAACCTCTCCGGTGTTTAGAGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAAATTTTTAAATGATTTTTAAAACCTCTCCGGTGTTTAGAGTAT  500

seq1  AGCTCATTTAGTGGGAGATACAGTTAGCATACATGCAGCCCAAGATTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCATTTAGTGGGAGATACAGTTAGCATACATGCAGCCCAAGATTCAG  550

seq1  CCCTAGTATGAAAAATAAAAAAGGAAGAAAAGATAAAGAAATCAAATGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGTATGAAAAATAAAAAAGGAAGAAAAGATAAAGAAATCAAATGAA  600

seq1  GAAGGCATTGTCGGGTATGAAAATTATATGAACTTTAAATTCTGGTACCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCATTGTCGGGTATGAAAATTATATGAACTTTAAATTCTGGTACCC  650

seq1  AAAAAGGCTTGTTATATTATTATTTTTCACTTGAGAGTGGTATATAACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGCTTGTTATATTATTATTTTTCACTTGAGAGTGGTATATAACTG  700

seq1  AGACAGTATACACAGACAGTGGGAGCTAGTGGACTATGATATAGGAAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTATACACAGACAGTGGGAGCTAGTGGACTATGATATAGGAAGAG  750

seq1  ACCCCTCATCTTGTGATCTAGTTTCTCATTCGTAAGAGTCAAGAAACTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTCATCTTGTGATCTAGTTTCTCATTCGTAAGAGTCAAGAAACTTG  800

seq1  AAATTTCCTACAGGTATTATGTGTATTTTCCTGAAGACTTCTCAAAAGAC  850
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAATTTCCTACAGGTATTATGTGTATTTTCCTGAAGACTTCTC-AAAGAC  849

seq1  GATGCTAAGAACAACAAATCAATTGTACCTACTTAGAACTAGAATGTTTG  900
      |||||||   ||||| |||| |||||||||||||||||||||||||||||
seq2  GATGCTA--GACAAC-AATC-ATTGTACCTACTTAGAACTAGAATGTTTG  895

seq1  TGACCTTGAATTTCACAATTATACTGTGCTTCCATC-TGTGATCTAAACA  949
      |||||||||||||||| |||||||||||||| |||| ||||||||||   
seq2  TGACCTTGAATTTCAC-ATTATACTGTGCTT-CATCTTGTGATCTAA--C  941

seq1  ATGTGCCATACTCCTACC-AAAAAAATAAACCTTATAATTTCATTTATAA  998
      |||||||||||||||||| ||||||||||||||||| |||||||||||||
seq2  ATGTGCCATACTCCTACCAAAAAAAATAAACCTTAT-ATTTCATTTATAA  990

seq1  AAGGAAATTCCTTAAGAAAAACAAATAATTCAACTTGCCT-GCTTTATTT  1047
      |  |||||| ||||  |||| |||| ||||| |||||||| || ||||||
seq2  A--GAAATT-CTTAGAAAAACCAAAAAATTCCACTTGCCTGGCCTTATTT  1037

seq1  AATTT  1052
      |||||
seq2  AATTT  1042