BAC Information

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BAC

Clone NameB6Ng01-159F19
Chromosome8 (Build37)
Map Location 65,195,855 - 65,348,064
singlet/doubletdoublet
Overlap genenone
Upstream genePalld, BC013672, Anxa10, LOC100040775, LOC384830, LOC100040804, LOC665267
Downstream geneSpock3, LOC384831
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159F19.bB6Ng01-159F19.g
ACCDH953045DH953046
length1,1871,105
definitionDH953045|Mus musculus domesticus DNA, BAC clone: B6Ng01-159F19, 5' end.DH953046|Mus musculus domesticus DNA, BAC clone: B6Ng01-159F19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,195,855 - 65,197,048)(65,346,906 - 65,348,064)
sequence
gaattctcaatgtttagaatccatgtcaaaggagaaggagataatggact
cagtaaagttgttccctggcttatatgtatataccttggcacatgaacaa
acaagccccaatgttacacacacaaacacacacacacacacactcacaga
aagagagagagagagagagagagagagagagaaacaaagagaaagaaaag
gagagacagtaacaatactggcactcatattaacaataaaataaaaacct
tttcccttctatatattcctattaccacttctaaggaattcatagaacaa
tactcttcattcagtattgattaagtctcctgcatactgtcttttgcaat
agaccacatcgacttaaataacattttttttacaaagtaggtatattgcg
ttcattaatacatttgcaacagataatatattttaagaaagaaacagctg
tctgaatttattttatatttcatacccacaaactgatgtattacatttct
ccaaaaagcagcaaaatgaatgagtgaaaatgagtgaattaaccaaaaag
cttgagtgtaagtgatcccaaagaaaaggtttcattgcaaaaataaaaaa
taaaataaaaaaataaaataaaaattgaaaacaaagtgggaatttcagat
gtctggacaacaaatcagattatcagaaagctcataattagactctatgc
ctctaattttgcacaagtactctctatttctacatatacattcaaatgca
tacatgtataaacatgcacacatcacacacacacacacacacacacacac
acacacacacacacacacaaattctatatgagtaaactgaagaatgtact
ctacataagcaggcataaaaggagaggacccaatgtagattttgtttatg
ttttagaaatgcttctcgtactatgaagtctgagcatgtttggtttggtt
aaaaacacttactgccttgtcaaagctggagtagacttatagctaaaatt
caggagcaggaggattgtgcagaggttaaaccacaaggagaaacataatc
ggtttaaatgagctgttattggaccaggtgtctaaagtgatttctccaaa
agtatcccaaaccttacccttaaatggctgaactgagtaatggaagaata
attataaaaagaatcaggcagaactttagaaactttt
gaattcaacatccatctaaaaaataaacagatctagcattcacctccatg
ggtgaaattcaagccattggaaacactttctgcatctttaaacatactta
atttatccccatttcttcctcctttgagagactattcttacaattcacct
ataatgtgtggactcactgtcccttcgttcatattttaagctgattatgc
agcattgttgtcatcaaatgatgcattctgtattgcatttacataaatgt
tattcttttcaactgatctgtcagtattctgctgactaggtatttttctg
cacctctgattttgaggggcatataataaatgatatgaaagtattcttaa
ttttcaaaatataaggtgtcattccaccttctatactgttttcatgcata
cttcattttaaagcaatattcatcctattgttagcaatatatagagaaaa
agattattttagaataatttgatacatgattaaatataagaaaagggaat
tttaggttactaatttttaaaaatcattttttctaagtgtataagtatga
caaacatactcaatgactagttatgtctaaatcctattgtgtgaatggtc
atgaatggtcaatggaattaaaagaaagcatgtatttcacaatcactgac
tgaacggagtgacaagttttgatttcctgtggaatgcaaaaatgattttt
cctatttcaatacaaaaaagttcagttcacatatgtagggagattatgat
ggaattgcatctgggataaaaaatcgctttgtatcctctttcagacctat
gggtccttcttctaaatccatcctcattccaggatattcactctttgtaa
tcatgtttaagctttatttcaagttctttgtctgttagtctatatgtgta
ttattatccccggatcctgtttgttatagacgcgtctcacgacgcagaaa
gaccacaaacagatcttctgcgcaagcttattgcttacatcttcagagcc
gagtgcagaaggcagcagcaatggcgaaccacctttaagagaatttcctc
actagagttatattcccgatggtgcagcccatcgacaatgtctcacggga
aggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_65195855_65197048
seq2: B6Ng01-159F19.b_47_1233

seq1  GAATTCTCAATGTTTAGAATCCATGTCAAAGGAGAAGGAGATAATGGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAATGTTTAGAATCCATGTCAAAGGAGAAGGAGATAATGGACT  50

seq1  CAGTAAAGTTGTTCCCTGGCTTATATGTATATACCTTGGCACATGAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAAGTTGTTCCCTGGCTTATATGTATATACCTTGGCACATGAACAA  100

seq1  ACAAGCCCCAATGTTACACACACAAACACACACACACACACACTCACAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCCCCAATGTTACACACACAAACACACACACACACACACTCACAGA  150

seq1  AAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACAAAGAGAAAGAAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACAAAGAGAAAGAAAAG  200

seq1  GAGAGACAGTAACAATACTGGCACTCATATTAACAATAAAATAAAAACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGACAGTAACAATACTGGCACTCATATTAACAATAAAATAAAAACCT  250

seq1  TTTCCCTTCTATATATTCCTATTACCACTTCTAAGGAATTCATAGAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTTCTATATATTCCTATTACCACTTCTAAGGAATTCATAGAACAA  300

seq1  TACTCTTCATTCAGTATTGATTAAGTCTCCTGCATACTGTCTTTTGCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTTCATTCAGTATTGATTAAGTCTCCTGCATACTGTCTTTTGCAAT  350

seq1  AGACCACATCGACTTAAATAACATTTTTTTTACAAAGTAGGTATATTGCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCACATCGACTTAAATAACATTTTTTTTACAAAGTAGGTATATTGCG  400

seq1  TTCATTAATACATTTGCAACAGATAATATATTTTAAGAAAGAAACAGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTAATACATTTGCAACAGATAATATATTTTAAGAAAGAAACAGCTG  450

seq1  TCTGAATTTATTTTATATTTCATACCCACAAACTGATGTATTACATTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATTTATTTTATATTTCATACCCACAAACTGATGTATTACATTTCT  500

seq1  CCAAAAAGCAGCAAAATGAATGAGTGAAAATGAGTGAATTAACCAAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAAGCAGCAAAATGAATGAGTGAAAATGAGTGAATTAACCAAAAAG  550

seq1  CTTGAGTGTAAGTGATCCCAAAGAAAAGGTTTCATTGCAAAAATAAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTGTAAGTGATCCCAAAGAAAAGGTTTCATTGCAAAAATAAAAAA  600

seq1  TAAAATAAAAAAATAAAATAAAAATTGAAAACAAAGTGGGAATTTCAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAAAAAATAAAATAAAAATTGAAAACAAAGTGGGAATTTCAGAT  650

seq1  GTCTGGACAACAAATCAGATTATCAGAAAGCTCATAATTAGACTCTATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGACAACAAATCAGATTATCAGAAAGCTCATAATTAGACTCTATGC  700

seq1  CTCTAATTTTGCACAAGTACTCTCTATTTCTACATATACATTCAAATGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATTTTGCACAAGTACTCTCTATTTCTACATATACATTCAAATGCA  750

seq1  TACATGTATAAACATGCACACATCACACACACACACACACACACACACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGTATAAACATGCACACATCACACACACACACACACACACACACAC  800

seq1  ACACACACACACACACACAAATTCTATATGAGTAAACTGAAGAATGTACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACAAATTCTATATGAGTAAACTGAAGAATGTACT  850

seq1  CTACATAAGCAGGCATAAAAGGAGAGGACCCAATGTAGATTTTGTTTATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATAAGCAGGCATAAAAGGAGAGGACCCAATGTAGATTTTGTTTATG  900

seq1  TTTTAGAAATGCTTCTCGTACTATGAAGTCTGAGCATGTTTGGTTTGGTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGAAATGCTTCTCGTACTATGAAGTCTGAGCATGTTTGGTTTGGTT  950

seq1  AAAAACACTTACTGCCTTGTCAAAGCTGGAGTAGACTTATAGCTAAAAAT  1000
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAAAACACTTACTGCCTTGTCAAAGCTGGAGTAGACTTATAGCT-AAAAT  999

seq1  TCAGGGAGCAGAAGGATTGTGCAGAGGTTAAACCACAAGGAGAAACATAA  1050
      ||| ||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCA-GGAGCAGGAGGATTGTGCAGAGGTTAAACCACAAGGAGAAACATAA  1048

seq1  TCGGTTTAAATGAGCTGTTATTTGACCA-GTGTCTAAAGGTGA-TTCTCC  1098
      |||||||||||||||||||||| ||||| ||||||||| |||| ||||||
seq2  TCGGTTTAAATGAGCTGTTATTGGACCAGGTGTCTAAA-GTGATTTCTCC  1097

seq1  AAAAGTATTCCCAAAACTTACCCTTACAAGTGCTGAACTGAAGTAAT-GA  1147
      ||||||| ||||||| |||||||||| ||  ||||||||| |||||| ||
seq2  AAAAGTA-TCCCAAACCTTACCCTTA-AATGGCTGAACTG-AGTAATGGA  1144

seq1  AGAATACATTATAAAAAGAATCAGGCAGAGACTTAAGAAATACTTTT  1194
      |||||| |||||||||||||||||||||| |||| ||||  ||||||
seq2  AGAATA-ATTATAAAAAGAATCAGGCAGA-ACTTTAGAA--ACTTTT  1187

seq1: chr8_65346906_65348064
seq2: B6Ng01-159F19.g_66_1170 (reverse)

seq1  TGCCTTTCCCGTGATGACAACTGGGCCGATGGGCTGCAGCCAATCAGGGA  50
      |||| ||||||||| ||||     | ||||||||||||  | ||| ||||
seq2  TGCC-TTCCCGTGA-GACA---TTGTCGATGGGCTGCA--CCATC-GGGA  42

seq1  GTAATACATCCTAGGTGGAGGATAATTCTCCTTAAAAAGGGATGGGGTTT  100
       ||  ||   ||||   ||||| |||||| ||||||       || | ||
seq2  ATATAAC--TCTAG--TGAGGA-AATTCT-CTTAAA-------GGTGGTT  79

seq1  CGCCATT--TGCTGGCTTGCTCTCTTGCACTCTGGCTCCTGAAGATGTAA  148
      |||||||  ||||| |||       ||||||| |||| ||||||||||||
seq2  CGCCATTGCTGCTGCCTT------CTGCACTC-GGCT-CTGAAGATGTAA  121

seq1  GCAATAAAGCTTTGCCGCAGAAGATTCTGGTTTGTTGCGTCTTTCCTGGC  198
      ||||| ||||||   ||||||||| ||| ||||||   |||||| |||  
seq2  GCAAT-AAGCTT--GCGCAGAAGA-TCT-GTTTGT--GGTCTTT-CTG--  161

seq1  CGGTCGTGAGAACGCGTCTAATAACAGACCAGGATCCCGGGGATAAATAA  248
        |||||||| |||||||| |||||| | |||||| |||||||| |||||
seq2  -CGTCGTGAG-ACGCGTCT-ATAACA-AACAGGAT-CCGGGGAT-AATAA  205

seq1  ATAACACATATAAGACTTAAACAAGACAAAGAACTTGAAATAAAAGCTTA  298
         |||||||| |||||  ||| |||||||||||||||||| ||||||||
seq2  --TACACATAT-AGACT--AAC-AGACAAAGAACTTGAAAT-AAAGCTTA  248

seq1  AACCATGATTACAAAAGAGTGAATATCCTTGGAATGAGGATGGATTTTAG  348
      || ||||||||| ||||||||||||||| ||||||||||||||| |||||
seq2  AA-CATGATTAC-AAAGAGTGAATATCC-TGGAATGAGGATGGA-TTTAG  294

seq1  AAGAAGGACCCATAGGTCCTGAAAGAGGATACAAAGCGA-TTTTTATCCC  397
      ||||||||||||||||| ||||||||||||||||||||| ||||||||||
seq2  AAGAAGGACCCATAGGT-CTGAAAGAGGATACAAAGCGATTTTTTATCCC  343

seq1  AGATGCAATTCCATCATAATCTCCCTACATATGTGAACTGAACTTTTTTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCAATTCCATCATAATCTCCCTACATATGTGAACTGAACTTTTTTG  393

seq1  TATTGAAATAGGAAAAATCATTTTTGCATTCCACAGGAAATCAAAACTTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAAATAGGAAAAATCATTTTTGCATTCCACAGGAAATCAAAACTTG  443

seq1  TCACTCCGTTCAGTCAGTGATTGTGAAATACATGCTTTCTTTTAATTCCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCCGTTCAGTCAGTGATTGTGAAATACATGCTTTCTTTTAATTCCA  493

seq1  TTGACCATTCATGACCATTCACACAATAGGATTTAGACATAACTAGTCAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCATTCATGACCATTCACACAATAGGATTTAGACATAACTAGTCAT  543

seq1  TGAGTATGTTTGTCATACTTATACACTTAGAAAAAATGATTTTTAAAAAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATGTTTGTCATACTTATACACTTAGAAAAAATGATTTTTAAAAAT  593

seq1  TAGTAACCTAAAATTCCCTTTTCTTATATTTAATCATGTATCAAATTATT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAACCTAAAATTCCCTTTTCTTATATTTAATCATGTATCAAATTATT  643

seq1  CTAAAATAATCTTTTTCTCTATATATTGCTAACAATAGGATGAATATTGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATAATCTTTTTCTCTATATATTGCTAACAATAGGATGAATATTGC  693

seq1  TTTAAAATGAAGTATGCATGAAAACAGTATAGAAGGTGGAATGACACCTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATGAAGTATGCATGAAAACAGTATAGAAGGTGGAATGACACCTT  743

seq1  ATATTTTGAAAATTAAGAATACTTTCATATCATTTATTATATGCCCCTCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTGAAAATTAAGAATACTTTCATATCATTTATTATATGCCCCTCA  793

seq1  AAATCAGAGGTGCAGAAAAATACCTAGTCAGCAGAATACTGACAGATCAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGAGGTGCAGAAAAATACCTAGTCAGCAGAATACTGACAGATCAG  843

seq1  TTGAAAAGAATAACATTTATGTAAATGCAATACAGAATGCATCATTTGAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAGAATAACATTTATGTAAATGCAATACAGAATGCATCATTTGAT  893

seq1  GACAACAATGCTGCATAATCAGCTTAAAATATGAACGAAGGGACAGTGAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACAATGCTGCATAATCAGCTTAAAATATGAACGAAGGGACAGTGAG  943

seq1  TCCACACATTATAGGTGAATTGTAAGAATAGTCTCTCAAAGGAGGAAGAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACATTATAGGTGAATTGTAAGAATAGTCTCTCAAAGGAGGAAGAA  993

seq1  ATGGGGATAAATTAAGTATGTTTAAAGATGCAGAAAGTGTTTCCAATGGC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGATAAATTAAGTATGTTTAAAGATGCAGAAAGTGTTTCCAATGGC  1043

seq1  TTGAATTTCACCCATGGAGGTGAATGCTAGATCTGTTTATTTTTTAGATG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTTCACCCATGGAGGTGAATGCTAGATCTGTTTATTTTTTAGATG  1093

seq1  GATGTTGAATTC  1159
      ||||||||||||
seq2  GATGTTGAATTC  1105