BAC Information

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BAC

Clone NameB6Ng01-159I14
Chromosome8 (Build37)
Map Location 61,187,035 - 61,264,776
singlet/doubletdoublet
Overlap gene4930431L04Rik
Upstream geneLOC100040711
Downstream geneBC030500, LOC665116, LOC436042
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159I14.bB6Ng01-159I14.g
ACCDH953175DH953176
length1,0961,039
definitionDH953175|Mus musculus domesticus DNA, BAC clone: B6Ng01-159I14, 5' end.DH953176|Mus musculus domesticus DNA, BAC clone: B6Ng01-159I14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,187,035 - 61,188,136)(61,263,723 - 61,264,776)
sequence
gaattccatatgtaaatgatgctgaatatgaacttataaagatacctcct
gcctctgaaaggctgaaatatgaacatgtggatttgtaatctcatcagga
ttttgtattcttatgaatgtaaatccaacagcaaaattccaagaaataac
tatctacagttcattgaaattgttactgcagttctctcccttttctggga
tgccatcataactttgttgcctaaaacccagaggatgagagaaattagat
gtttctaggaagaatgtcccaacagatgagatacacttgagtcacagagg
gcacagttgtttttctaactaagaaaaacaaatttcaaaatatacaaact
agcttctactgttggtggaatcaaatcacacaaaaacaggtatttccagg
caaattatatttattgatcaatagcaataaattgtatggtgcaaagcatg
gaaagggtactagggtgggtctgttacctagtttctcattgagttcacat
tctgagagctcagggtactgttggccctcaggctgtagagtgcattgatg
caacaactcacaggttttcagccatttctggtgctgaaatatagagcagg
ttatttgatttaatccagctacagaattggttgattatagtacctagctg
attaagataatatccataaagcgcttagaaacctgactcgagtttggtaa
gaggtcaaaagctggtgaatatatttaaccacccaataattatagcccaa
gtctctctattaatagaaattcgggttaatatagtgaaccaacatttaca
caaaattatgatatagtatatgtgtttgtataaaacatactcaatgtata
attagttaataacactgaatgaaaaaatataatactcttaaggatttttt
ttgcatttctacaagctactatttattaagcaatttttttgtattggtta
tttatttacatttcaaatgctatctcccttcctattataacagtgaaatc
accagtaaactttcaggtttcttttgcagttcatgaacaattgttttaaa
aatacctaagagcagagggtatacttttgcatgaagagagcttctt
gaattcattgacattcttgcttcaagctggcagaactttttcactggaga
cagttctcagcaaaacttcatgaagtgctgtgtctggtgctattatgagt
tcttaaaagggctgagtagaaaatcggtgccttttacataggaagtattc
agtaagcatttatctaaaaggaagctgtaaagctgagaagaggggaggag
caagagaagagaggaatctattaacttaagcttaacaaagtgtgatgtat
gaagcttaagcatacacattcaacacagtatgcctggtgtctttcacaga
atatgttaatgcttccaggatcattttatttatttatcagcagcataata
atgtattgatataataactttgttatctataaaacaatgtagcagtgaag
catttttgatacatgtttacaactgaagaacatgggaagcaaagacagga
aaaataccacaaactaaaggctaacctatagaaatattctttatctcact
agtaataaaaagatatgaaacttatactttttgttgaaatatatgaacgg
caaactgcatgtcatttaatattattatttgtattcctccagtttttttg
ttaggctaataatcctttttctagtttgtgtgctgtgggtaggaggctat
gtggaagcaattgggcactaagaagttttctgcgtgcaatcatcacagta
tttctgtctcctataggcttcataatcagataagtccatcagtggtcaca
gggtccagtgtggtagataactgaaaaaaaaaaaaaaacatttttaacat
ttggacttggcttacttcagaattctatagtacagtcacccataagtctg
aaactcaattcttttcatatttgacctctgacccacatcaaatcgaaact
gatgagaactgatgtttattgactgcaaagcttctttcctgtgagtggta
tacaaagttcttagactgcacattgttcatgagttattctagcttaagat
cttttttttcagagaaattgtggctgttgtgaatttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_61187035_61188136
seq2: B6Ng01-159I14.b_46_1141

seq1  GAATTCCATATGTAAATGATGCTGAATATGAACTTATAAAGATACCTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATGTAAATGATGCTGAATATGAACTTATAAAGATACCTCCT  50

seq1  GCCTCTGAAAGGCTGAAATATGAACATGTGGATTTGTAATCTCATCAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGAAAGGCTGAAATATGAACATGTGGATTTGTAATCTCATCAGGA  100

seq1  TTTTGTATTCTTATGAATGTAAATCCAACAGCAAAATTCCAAGAAATAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTATTCTTATGAATGTAAATCCAACAGCAAAATTCCAAGAAATAAC  150

seq1  TATCTACAGTTCATTGAAATTGTTACTGCAGTTCTCTCCCTTTTCTGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTACAGTTCATTGAAATTGTTACTGCAGTTCTCTCCCTTTTCTGGGA  200

seq1  TGCCATCATAACTTTGTTGCCTAAAACCCAGAGGATGAGAGAAATTAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATCATAACTTTGTTGCCTAAAACCCAGAGGATGAGAGAAATTAGAT  250

seq1  GTTTCTAGGAAGAATGTCCCAACAGATGAGATACACTTGAGTCACAGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTAGGAAGAATGTCCCAACAGATGAGATACACTTGAGTCACAGAGG  300

seq1  GCACAGTTGTTTTTCTAACTAAGAAAAACAAATTTCAAAATATACAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGTTGTTTTTCTAACTAAGAAAAACAAATTTCAAAATATACAAACT  350

seq1  AGCTTCTACTGTTGGTGGAATCAAATCACACAAAAACAGGTATTTCCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTACTGTTGGTGGAATCAAATCACACAAAAACAGGTATTTCCAGG  400

seq1  CAAATTATATTTATTGATCAATAGCAATAAATTGTATGGTGCAAAGCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTATATTTATTGATCAATAGCAATAAATTGTATGGTGCAAAGCATG  450

seq1  GAAAGGGTACTAGGGTGGGTCTGTTACCTAGTTTCTCATTGAGTTCACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGTACTAGGGTGGGTCTGTTACCTAGTTTCTCATTGAGTTCACAT  500

seq1  TCTGAGAGCTCAGGGTACTGTTGGCCCTCAGGCTGTAGAGTGCATTGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAGCTCAGGGTACTGTTGGCCCTCAGGCTGTAGAGTGCATTGATG  550

seq1  CAACAACTCACAGGTTTTCAGCCATTTCTGGTGCTGAAATATAGAGCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACTCACAGGTTTTCAGCCATTTCTGGTGCTGAAATATAGAGCAGG  600

seq1  TTATTTGATTTAATCCAGCTACAGAATTGGTTGATTATAGTACCTAGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGATTTAATCCAGCTACAGAATTGGTTGATTATAGTACCTAGCTG  650

seq1  ATTAAGATAATATCCATAAAGCGCTTAGAAACCTGACTCGAGTTTGGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGATAATATCCATAAAGCGCTTAGAAACCTGACTCGAGTTTGGTAA  700

seq1  GAGGTCAAAAGCTGGTGAATATATTTAACCACCCAATAATTATAGCCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCAAAAGCTGGTGAATATATTTAACCACCCAATAATTATAGCCCAA  750

seq1  GTCTCTCTATTAATAGAAATTCGGGTTAATATAGTGAACCAACATTTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTCTATTAATAGAAATTCGGGTTAATATAGTGAACCAACATTTACA  800

seq1  CAAAATTATGATATAGTATATGTGTTTGTATAAAACATACTCAATGTATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTATGATATAGTATATGTGTTTGTATAAAACATACTCAATGTATA  850

seq1  ATTAGTTAATAACACTGAATGAAAAAATATAATACTCTTAAGGATTTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTTAATAACACTGAATGAAAAAATATAATACTCTTAAGGATTTTTT  900

seq1  TTGCA-TTCTACAAGCTACTATTTATTAAGCAATTTTTTTGTATTGGTTA  949
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTTCTACAAGCTACTATTTATTAAGCAATTTTTTTGTATTGGTTA  950

seq1  TTTTATTTACATTTCAAATGCTATCTCCCTTCCTAATTTATAACAGTGAA  999
       ||||||||||||||||||||||||||||||||||  |||||||||||||
seq2  -TTTATTTACATTTCAAATGCTATCTCCCTTCCTA--TTATAACAGTGAA  997

seq1  ATCACCAGTAAACTTTCA-GTTTCTTTTGCAGTTCCATGAACAAAATGTT  1048
      |||||||||||||||||| ||||||||||||||| ||||||| || ||||
seq2  ATCACCAGTAAACTTTCAGGTTTCTTTTGCAGTT-CATGAAC-AATTGTT  1045

seq1  TTAAAAATACCTAAGAAGCAGAGGGTATACTTTTTGCAATGAAGAGAGCT  1098
      ||||||||||||||| |||||||||||||| |||||| ||||||||||||
seq2  TTAAAAATACCTAAG-AGCAGAGGGTATAC-TTTTGC-ATGAAGAGAGCT  1092

seq1  TCTT  1102
      ||||
seq2  TCTT  1096

seq1: chr8_61263723_61264776
seq2: B6Ng01-159I14.g_67_1105 (reverse)

seq1  AAAAAATTCACAACAGCACACATATTTCT-TGAAAAAAAAAAAAGATACT  49
      ||||||||||||||||| |||| |||||| ||    ||||||||||| ||
seq2  AAAAAATTCACAACAGC-CACA-ATTTCTCTG----AAAAAAAAGAT-CT  43

seq1  GTAGCTATGAATAACCTCATGAACAATGTGCAGGTCTAAGAACTTTGTAT  99
        ||||| |||||| ||||||||||||||||| |||||||||||||||||
seq2  TAAGCTA-GAATAA-CTCATGAACAATGTGCA-GTCTAAGAACTTTGTAT  90

seq1  ACCACTCACCAGGAAAGAAGCTTTTGCAGTCAATAAACATTCAGTTTCTC  149
      |||||||| |||||||||||| ||||||||||||||||| |||| |||||
seq2  ACCACTCA-CAGGAAAGAAGC-TTTGCAGTCAATAAACA-TCAG-TTCTC  136

seq1  ATCAGTTTCGATTTGATTGTTGGGTCAGAGGTCAAATATGAAAAGAATTG  199
      |||||||||||||||||   ||||||||||||||||||||||||||||||
seq2  ATCAGTTTCGATTTGAT--GTGGGTCAGAGGTCAAATATGAAAAGAATTG  184

seq1  AGTTTCAGACTTATGGGTGACTGTACTATAGAATTCTGAAGTAAGCCAAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCAGACTTATGGGTGACTGTACTATAGAATTCTGAAGTAAGCCAAG  234

seq1  TCCAAATGTTAAAAATGTTTTTTTTTTTTTTTCAGTTATCTACCACACTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATGTTAAAAATGTTTTTTTTTTTTTTTCAGTTATCTACCACACTG  284

seq1  GACCCTGTGACCACTGATGGACTTATCTGATTATGAAGCCTATAGGAGAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTGTGACCACTGATGGACTTATCTGATTATGAAGCCTATAGGAGAC  334

seq1  AGAAATACTGTGATGATTGCACGCAGAAAACTTCTTAGTGCCCAATTGCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATACTGTGATGATTGCACGCAGAAAACTTCTTAGTGCCCAATTGCT  384

seq1  TCCACATAGCCTCCTACCCACAGCACACAAACTAGAAAAAGGATTATTAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATAGCCTCCTACCCACAGCACACAAACTAGAAAAAGGATTATTAG  434

seq1  CCTAACAAAAAAACTGGAGGAATACAAATAATAATATTAAATGACATGCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACAAAAAAACTGGAGGAATACAAATAATAATATTAAATGACATGCA  484

seq1  GTTTGCCGTTCATATATTTCAACAAAAAGTATAAGTTTCATATCTTTTTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCCGTTCATATATTTCAACAAAAAGTATAAGTTTCATATCTTTTTA  534

seq1  TTACTAGTGAGATAAAGAATATTTCTATAGGTTAGCCTTTAGTTTGTGGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAGTGAGATAAAGAATATTTCTATAGGTTAGCCTTTAGTTTGTGGT  584

seq1  ATTTTTCCTGTCTTTGCTTCCCATGTTCTTCAGTTGTAAACATGTATCAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCCTGTCTTTGCTTCCCATGTTCTTCAGTTGTAAACATGTATCAA  634

seq1  AAATGCTTCACTGCTACATTGTTTTATAGATAACAAAGTTATTATATCAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTTCACTGCTACATTGTTTTATAGATAACAAAGTTATTATATCAA  684

seq1  TACATTATTATGCTGCTGATAAATAAATAAAATGATCCTGGAAGCATTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTATTATGCTGCTGATAAATAAATAAAATGATCCTGGAAGCATTAA  734

seq1  CATATTCTGTGAAAGACACCAGGCATACTGTGTTGAATGTGTATGCTTAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCTGTGAAAGACACCAGGCATACTGTGTTGAATGTGTATGCTTAA  784

seq1  GCTTCATACATCACACTTTGTTAAGCTTAAGTTAATAGATTCCTCTCTTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCATACATCACACTTTGTTAAGCTTAAGTTAATAGATTCCTCTCTTC  834

seq1  TCTTGCTCCTCCCCTCTTCTCAGCTTTACAGCTTCCTTTTAGATAAATGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTCCTCCCCTCTTCTCAGCTTTACAGCTTCCTTTTAGATAAATGC  884

seq1  TTACTGAATACTTCCTATGTAAAAGGCACCGATTTTCTACTCAGCCCTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGAATACTTCCTATGTAAAAGGCACCGATTTTCTACTCAGCCCTTT  934

seq1  TAAGAACTCATAATAGCACCAGACACAGCACTTCATGAAGTTTTGCTGAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAACTCATAATAGCACCAGACACAGCACTTCATGAAGTTTTGCTGAG  984

seq1  AACTGTCTCCAGTGAAAAAGTTCTGCCAGCTTGAAGCAAGAATGTCAATG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTCTCCAGTGAAAAAGTTCTGCCAGCTTGAAGCAAGAATGTCAATG  1034

seq1  AATTC  1054
      |||||
seq2  AATTC  1039