BAC Information

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BAC

Clone NameB6Ng01-159N08
Chromosome8 (Build37)
Map Location 52,159,020 - 52,160,153
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039954, LOC100039966
Downstream geneLOC667517, LOC623872
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159N08.bB6Ng01-159N08.g
ACCDH953381DH953382
length1,1161,122
definitionDH953381|Mus musculus domesticus DNA, BAC clone: B6Ng01-159N08, 5' end.DH953382|Mus musculus domesticus DNA, BAC clone: B6Ng01-159N08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacacataatacatatcttcaaatcaaatttctttctctcttgaa
ctttccatctttttgagctcagaaaaggatgtctagtacttgggcctgat
ccttcttgcatcaggtaccattaactgttgtgaaataagtatcaattcag
gcagaaatcaatttgtgagtcacagggttgtcatttcaaaatactgatga
gagtgggattctacagtgcacagggaagactttcaagtgagctggagagg
agctttatacacaccaggatagaggtcttctgttacgtgagccagagtgt
taacgcaagatatatgcaccacatgatcactaggtataaagattgtacat
acaggtttgacagagaaagcaaatacatgaacagaaaatgaggtttcata
tattcttaccattggatagcataggctttatttgatatgcctcaggaagt
tctttgaagtgagattaaggataattttccatgggattatttgaaaaata
gtctccaaatagtcgcatgctttgtgtgaggggttttattaatcctaggt
gcatttattaatactcttgtcattgtttgtatcgttttgttttctctttg
atacaggaacacatgtagcccaatctaagcttacacttacacttgctatt
tagataaagatgaccttgaacttctgattttatatcctaccctcatatca
ttagattttaggcctacgctaccaagttagtattcattgtgctggggtta
aaagcagaatctcaagtatattcttcacatattctgccacctgcgtcaca
cctgtacagaaatacttttaaaaaatttctactttcatggttcattccgg
attattgtagaatcatgtttttaagttcctaaggtttcttctgcatctgc
atatatctccggtctgtctatactcttactatattacagataacgtcatc
gtttcttttcatctcattactttaattacagagaagtcagtttctactaa
ttacaaaaacaactgcagtatgttttctatttccttgattctttttaatc
tcagtgatattgacataattttatgttgtctaagattcaactaataactt
aaatatcgctaaatac
gaattcagtgtgcaggcctgctcttcatgaaaatacttgaatgactattt
aaaattaatttggttctttattaaagaaataaaatgaattagttctagga
atttaaatgaattaaagtttgatgttcatttttttgtgctaactttataa
gtagcagatgtaataagtcatttagtgtcatcatatttttgacactcaac
ttgctaatatttaagaagacaaacataccatataatttgctaaatattaa
tattttctaaacatgaaatgtttttttgaaatacaatacaaattaagcta
ctaaaagtattaccaaaaatgtaatttattaattatgtaatgtttacttt
acaattgttaaagcttcttagtatttggcatggaacaggtttttttaatg
taataattgcctagcttatgtcaaaattatcattgaaagaggcaggaggt
aattcttttgaaaataataacattccattttatgaagatgcattattatt
ccatttcataattctggattcattctcaaaatcaagtgtctataggtgtg
tgaatttgtgtccatgtctttaattggattccattaatcaacatctttgt
ttttagtccaatatcatgaggtttttattattatggctttgtagtacagc
atgaaatcagggatggtgatatgaaagttctttcatcttacttgactgtt
tcagttatcctgggttttttgtttttccataggaagctgtgtattgttat
tccaagactttataaagaatttttatagggattgtgttgagtctgtagat
tgcatttcataagatggtcatttgcactggtatgtctaccaataggtgag
catgggatatctttctagcatctaatgtcttcttcaatttccttatccaa
gacttgaatttctcgacatacacatgtttcccttgctagttatagttttg
ccaagaatttttttttatttttatttgtgactattgtgaattctgtattt
ccctgatttcatttcagccatatattttgtataaaggaatagcctattaa
ttttttaattaatcttgatcactctttggatgatagataggacagcatgt
atgatcaatagatagagatagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_52159020_52160153
seq2: B6Ng01-159N08.b_49_1164

seq1  GAATTCACACATAATACATATCTTCAAATCAAATTTCTTTCTCTCTTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACATAATACATATCTTCAAATCAAATTTCTTTCTCTCTTGAA  50

seq1  CTTTCCATCTTTTTGAGCTCAGAAAAGGATGTCTAGTACTTGGGCCTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCATCTTTTTGAGCTCAGAAAAGGATGTCTAGTACTTGGGCCTGAT  100

seq1  CCTTCTTGCATCAGGTACCATTAACTGTTGTGAAATAAGTATCAATTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTGCATCAGGTACCATTAACTGTTGTGAAATAAGTATCAATTCAG  150

seq1  GCAGAAATCAATTTGTGAGTCACAGGGTTGTCATTTCAAAATACTGATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAATCAATTTGTGAGTCACAGGGTTGTCATTTCAAAATACTGATGA  200

seq1  GAGTGGGATTCTACAGTGCACAGGGAAGACTTTCAAGTGAGCTGGAGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGATTCTACAGTGCACAGGGAAGACTTTCAAGTGAGCTGGAGAGG  250

seq1  AGCTTTATACACACCAGGATAGAGGTCTTCTGTTACGTGAGCCAGAGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTATACACACCAGGATAGAGGTCTTCTGTTACGTGAGCCAGAGTGT  300

seq1  TAACGCAAGATATATGCACCACATGATCACTAGGTATAAAGATTGTACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGCAAGATATATGCACCACATGATCACTAGGTATAAAGATTGTACAT  350

seq1  ACAGGTTTGACAGAGAAAGCAAATACATGAACAGAAAATGAGGTTTCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTTTGACAGAGAAAGCAAATACATGAACAGAAAATGAGGTTTCATA  400

seq1  TATTCTTACCATTGGATAGCATAGGCTTTATTTGATATGCCTCAGGAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTACCATTGGATAGCATAGGCTTTATTTGATATGCCTCAGGAAGT  450

seq1  TCTTTGAAGTGAGATTAAGGATAATTTTCCATGGGATTATTTGAAAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAAGTGAGATTAAGGATAATTTTCCATGGGATTATTTGAAAAATA  500

seq1  GTCTCCAAATAGTCGCATGCTTTGTGTGAGGGGTTTTATTAATCCTAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCAAATAGTCGCATGCTTTGTGTGAGGGGTTTTATTAATCCTAGGT  550

seq1  GCATTTATTAATACTCTTGTCATTGTTTGTATCGTTTTGTTTTCTCTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTATTAATACTCTTGTCATTGTTTGTATCGTTTTGTTTTCTCTTTG  600

seq1  ATACAGGAACACATGTAGCCCAATCTAAGCTTACACTTACACTTGCTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGAACACATGTAGCCCAATCTAAGCTTACACTTACACTTGCTATT  650

seq1  TAGATAAAGATGACCTTGAACTTCTGATTTTATATCCTACCCTCATATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAAAGATGACCTTGAACTTCTGATTTTATATCCTACCCTCATATCA  700

seq1  TTAGATTTTAGGCCTACGCTACCAAGTTAGTATTCATTGTGCTGGGGTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTTTAGGCCTACGCTACCAAGTTAGTATTCATTGTGCTGGGGTTA  750

seq1  AAAGCAGAATCTCAAGTATATTCTTCACATATTCTGCCACCTGCGTCACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGAATCTCAAGTATATTCTTCACATATTCTGCCACCTGCGTCACA  800

seq1  CCTGTACAGAAATACTTTTAAAAAATTTCTACTTTCATGGTTCATTCCGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTACAGAAATACTTTTAAAAAATTTCTACTTTCATGGTTCATTCCGG  850

seq1  ATTATTGTAGAATCATGTTTTTAAGTTCCTAAGGTTTCTTCTGCATCTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGTAGAATCATGTTTTTAAGTTCCTAAGGTTTCTTCTGCATCTGC  900

seq1  ATATATCTCCGGTCTGTCTATACTCCTTACTATATTACAGATAACGTCAT  950
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATATATCTCCGGTCTGTCTATACT-CTTACTATATTACAGATAACGTCAT  949

seq1  CGTTTTCTTTTCATCCCATTACTTTAATTACAGAGAAAGTCAGTTTCTAC  1000
      || |||||||||||| ||||||||||||||||||| ||||||||||||||
seq2  CG-TTTCTTTTCATCTCATTACTTTAATTACAGAG-AAGTCAGTTTCTAC  997

seq1  TAATTACAAAACAAACTGCCAGTTATGTTTTCTATTTCCTTGATTTCTTT  1050
      |||||||||||  ||||| ||| |||||||||||||||||||| ||||||
seq2  TAATTACAAAAACAACTG-CAG-TATGTTTTCTATTTCCTTGA-TTCTTT  1044

seq1  TTAATCTCAGTGATATTTGACATTAATGTTATGTTTGGTTCTAAGATTTT  1100
      ||||||||||||||| |||||| |||| |||||||    |||||||  ||
seq2  TTAATCTCAGTGATA-TTGACA-TAATTTTATGTT---GTCTAAGA--TT  1087

seq1  CAACTAATAACCTTAACATTATCGCTTAAAATAC  1134
      ||||||||||| | ||   |||||||  ||||||
seq2  CAACTAATAACTTAAA---TATCGCT--AAATAC  1116