BAC Information

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BAC

Clone NameB6Ng01-161F12
Chromosome8 (Build37)
Map Location 68,014,789 - 68,048,456
singlet/doubletdoublet
Overlap geneLOC100040967
Upstream geneCpe, Sc4mol, Klhl2, LOC100040903, LOC619647, 3110005G23Rik, Trim75, Trim60, LOC665388, LOC665396, LOC100040949, LOC665405, Vaultrc-ps1
Downstream geneMarch1, LOC100040986, 1810029B16Rik, Tktl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-161F12.bB6Ng01-161F12.g
ACCDH954479DH954480
length942967
definitionDH954479|Mus musculus domesticus DNA, BAC clone: B6Ng01-161F12, 5' end.DH954480|Mus musculus domesticus DNA, BAC clone: B6Ng01-161F12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,047,891 - 68,048,456)(68,014,789 - 68,015,361)
sequence
gaattccttgttcaccatgacatctgtgatgtatgttctcttatccccta
acaaggttacttttgtcattttagaatgtatttgattataaagatacctt
tattaagttattattttacagacttcatacatgcatatcatacaaaaacc
ttctgctctttactgcaaaaaccttctgttctttactgcacgtgtctcat
ctcctttgtttcttacctttccataccaagtcccatccttccttcgtatc
tcacttgctttttgacaggtgggtttaactggataatagagttatccact
ggagcatgaacaactcactaaaactaaattactaaagagaatgatttccc
ctcttccatcagccattggctgctttttgcttccctaggcagtgcccctc
ccatattcatccactcagccctatgcaaaccctacataggcaacatcatt
tgctgtgaatgtgtaagtgccacaatcataccatgcccagaagacaacat
ttcactgtgtgcttacctattgtttgttcttacatttgtactactccaac
caccctatgttccctaagccttagagggagtgatatgacagtcacaatta
accttgagcactcaacagtcagttgcttttaacatcttgaccatccacga
gtatctgcattaatcgctattgtaaatagaagcatcttcgagcaaggctt
acaacagcacttattctatgagtattttaaattcagtatctatggacaat
ttgacaacatgcccttcagcaaaactaaaatagcatgttcatccctaaca
cctataaccacaccaatcatgggcctttgacaaggtgaacaataacaaat
aagaactctgtcatttaaagacacctcaactctgaggaagaaatcagttg
gctaccccatcactgccatgctactattgtaccagtaagctt
gaattctggtactcagctccctttcttccctgttcaattaacacactata
taaggtcctcaaagacatactggagggtaggctcatatatttgaatactt
ggcccccagttggtagaactatctgtgaggattagaaggtatggccttgt
ttgaggagatgtgtatgattcttagtttctattgctttgcctcctacttt
tggataaatgtagaggaattttaatccagccacatggctactatggcaag
tgatcacatccaaagactttctaggtatgtttgattcagaagaaatgaca
ctgcaactatgattcctctggctggcatatagacataccctcactacaca
tcattaatcccaagcgacgaaggtaaagttggtttgtagagagaagcatc
catgtttgaaagtgacatctaatagaagggaagacaaggtgatgaatcag
aaaaagagttgacaggatgagtcagagataggatgcacccaactttccta
agaacagacaggaaagaaaggctacttaaaagcatagaagtaaacgaaag
ggagagaaagacagagcaagagaaaaaggagtgtggtgtatggtacttct
acccagacagttttacaaagacgggttgcagaaagaacaagatagtcaca
ggtaactacagaataaagtggagaaagaaaaggggccacagggtagagaa
aattaccagagttagtttgaggccaagcagagcaattcagtgagaaagtg
agagaagccagtttgaatcagccagtatagagagaggagttggatctaga
acagatgagttgaaccagtaatcctcagtttacaaagaacgagaaagcat
gattcttgttcagcagtaagcctccaagctagcaattacatctgatggga
aaataagtttcttgtacagatcaagattgtaagattaccagctgttcctg
ctaccatatatttactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_68047891_68048456
seq2: B6Ng01-161F12.b_47_612 (reverse)

seq1  TAGGGAACATAGGGTGGTTGGAGTAGTACAAATGTAAGAACAAACAATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAACATAGGGTGGTTGGAGTAGTACAAATGTAAGAACAAACAATAG  50

seq1  GTAAGCACACAGTGAAATGTTGTCTTCTGGGCATGGTATGATTGTGGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCACACAGTGAAATGTTGTCTTCTGGGCATGGTATGATTGTGGCAC  100

seq1  TTACACATTCACAGCAAATGATGTTGCCTATGTAGGGTTTGCATAGGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACATTCACAGCAAATGATGTTGCCTATGTAGGGTTTGCATAGGGCT  150

seq1  GAGTGGATGAATATGGGAGGGGCACTGCCTAGGGAAGCAAAAAGCAGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGATGAATATGGGAGGGGCACTGCCTAGGGAAGCAAAAAGCAGCCA  200

seq1  ATGGCTGATGGAAGAGGGGAAATCATTCTCTTTAGTAATTTAGTTTTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTGATGGAAGAGGGGAAATCATTCTCTTTAGTAATTTAGTTTTAGT  250

seq1  GAGTTGTTCATGCTCCAGTGGATAACTCTATTATCCAGTTAAACCCACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGTTCATGCTCCAGTGGATAACTCTATTATCCAGTTAAACCCACCT  300

seq1  GTCAAAAAGCAAGTGAGATACGAAGGAAGGATGGGACTTGGTATGGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAAAGCAAGTGAGATACGAAGGAAGGATGGGACTTGGTATGGAAAG  350

seq1  GTAAGAAACAAAGGAGATGAGACACGTGCAGTAAAGAACAGAAGGTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAAACAAAGGAGATGAGACACGTGCAGTAAAGAACAGAAGGTTTTT  400

seq1  GCAGTAAAGAGCAGAAGGTTTTTGTATGATATGCATGTATGAAGTCTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTAAAGAGCAGAAGGTTTTTGTATGATATGCATGTATGAAGTCTGTA  450

seq1  AAATAATAACTTAATAAAGGTATCTTTATAATCAAATACATTCTAAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATAACTTAATAAAGGTATCTTTATAATCAAATACATTCTAAAATG  500

seq1  ACAAAAGTAACCTTGTTAGGGGATAAGAGAACATACATCACAGATGTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGTAACCTTGTTAGGGGATAAGAGAACATACATCACAGATGTCAT  550

seq1  GGTGAACAAGGAATTC  566
      ||||||||||||||||
seq2  GGTGAACAAGGAATTC  566

seq1: chr8_68014789_68015361
seq2: B6Ng01-161F12.g_67_639

seq1  GAATTCTGGTACTCAGCTCCCTTTCTTCCCTGTTCAATTAACACACTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGTACTCAGCTCCCTTTCTTCCCTGTTCAATTAACACACTATA  50

seq1  TAAGGTCCTCAAAGACATACTGGAGGGTAGGCTCATATATTTGAATACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTCCTCAAAGACATACTGGAGGGTAGGCTCATATATTTGAATACTT  100

seq1  GGCCCCCAGTTGGTAGAACTATCTGTGAGGATTAGAAGGTATGGCCTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCCAGTTGGTAGAACTATCTGTGAGGATTAGAAGGTATGGCCTTGT  150

seq1  TTGAGGAGATGTGTATGATTCTTAGTTTCTATTGCTTTGCCTCCTACTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGAGATGTGTATGATTCTTAGTTTCTATTGCTTTGCCTCCTACTTT  200

seq1  TGGATAAATGTAGAGGAATTTTAATCCAGCCACATGGCTACTATGGCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAAATGTAGAGGAATTTTAATCCAGCCACATGGCTACTATGGCAAG  250

seq1  TGATCACATCCAAAGACTTTCTAGGTATGTTTGATTCAGAAGAAATGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCACATCCAAAGACTTTCTAGGTATGTTTGATTCAGAAGAAATGACA  300

seq1  CTGCAACTATGATTCCTCTGGCTGGCATATAGACATACCCTCACTACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAACTATGATTCCTCTGGCTGGCATATAGACATACCCTCACTACACA  350

seq1  TCATTAATCCCAAGCGACGAAGGTAAAGTTGGTTTGTAGAGAGAAGCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAATCCCAAGCGACGAAGGTAAAGTTGGTTTGTAGAGAGAAGCATC  400

seq1  CATGTTTGAAAGTGACATCTAATAGAAGGGAAGACAAGGTGATGAATCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTGAAAGTGACATCTAATAGAAGGGAAGACAAGGTGATGAATCAG  450

seq1  AAAAAGAGTTGACAGGATGAGTCAGAGATAGGATGCACCCAACTTTCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAGTTGACAGGATGAGTCAGAGATAGGATGCACCCAACTTTCCTA  500

seq1  AGAACAGACAGGAAAGAAAGGCTACTTAAAAGCATAGAAGTAAACGAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGACAGGAAAGAAAGGCTACTTAAAAGCATAGAAGTAAACGAAAG  550

seq1  GGAGAGAAAGACAGAGCAAGAGA  573
      |||||||||||||||||||||||
seq2  GGAGAGAAAGACAGAGCAAGAGA  573