BAC Information

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BAC

Clone NameB6Ng01-161I14
Chromosome8 (Build37)
Map Location 119,181,501 - 119,315,110
singlet/doubletdoublet
Overlap geneCdyl2, LOC100043053
Upstream geneMaf, LOC384868, LOC668233, Dynlrb2
Downstream gene2310061C15Rik, 2610510J17Rik, BC060631, 1700030J22Rik, Gcsh, Pkd1l2, Bcmo1, Gan, 4933407C03Rik, Plcg2, 4632417N05Rik, Hsd17b2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-161I14.bB6Ng01-161I14.g
ACCDH954622DH954623
length1,197984
definitionDH954622|Mus musculus domesticus DNA, BAC clone: B6Ng01-161I14, 5' end.DH954623|Mus musculus domesticus DNA, BAC clone: B6Ng01-161I14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,313,916 - 119,315,110)(119,181,501 - 119,182,488)
sequence
gaattcttccaccgatctacatccccccagttccagactgttcttcagta
tgttttctttctcttgtttgaggcaagatcccatgtagactaagcgggcc
tcaaacttgtacagctgaggatgtcctcgaggatgtcctgatcctcctgc
ctccacctgctcagtgctgggaacacaggcattcaccaccatacccaact
gttggtgacagttttttcaaaagccaacaaatttccttttgaaaacattt
cagaaactgagtgtacgggattgttttgcctgcgtgtctgtatgtccacg
cacggcatgcattcagtgcccttggaggacagaagagggtgtcagattcc
cggagagactgatattagaaatgattagatattagatgattgtaagccac
cgtgtgggtgctgggaattgaactgggatctcctaggagagcagccagtg
ctcttaactgctgagccctctctctagccccaactttccttttgaaataa
aaagattttttgcagctgtaactcggagcacagattgcagagcagtgagg
tgttggcttctatgaacacactcggcttcatttacacagcagcgttgttt
atgttccttcccgattgtggttttctattttgaaattaacgatgtcatca
tttcaaacgtagctgttatgggtgtgcctagcttacagtcccctgtgtaa
ccctttacccttgagctgggtggaagctgagcagcgcgtcccccggtcac
gtggtccagacctctaggtaccagaagctgagcagcgctttccctggatc
acgtggtttagacctctgggtaccacgttatagtctctggtgtgtggcct
tcttccccactgataattttcagaatttcctcagccatggcgcactcatt
tatcactcggacaaccgtacaatttaccctgtcgattctgtaagggcaat
ccgtggtattttgactaaatcaaattgcaattaagggattaatttagcct
tttggagctgagaattttccttcctcattcatcattcatccatcattcaa
ttcactttataatttcagttgcagccccctctttctggttcacgctcccc
aaagacagagctcatatccccaagcttctcctccctcttccctctgggta
caacacccatggtcacattacgtcactctaggacataggcatatcct
gaattcccagtacaataaatgcaaaaatattcacagccagacatatcaca
gtgaaacgctggaatccaaagataaagacaaaaaaaaaatccttcaagaa
gcaagaaaaatccgactcattcctaaccaagcaattacaagatactgaac
taacttgtcagcaaggcacgggaccaagaactttttaaagggatgctgta
aaattgaaggcaaaataaaggcattgccagatacgcaataaaagtgaaaa
tattttctgtagagcaaccactaaaattataactaaatacagagataata
ttccagatgatatttaagtttctaaatattcaattaatgggaaataaagc
agaaaattgaaaggtatgggatgaccaagtaaatacagaacaaacagaaa
acaaacacagaattaagagcatgcagatagataatatgaaaaaatcaaat
tcaaatgttataaacactcagtttgaaaagactgaagacaagtggtagga
cacttaagttgagaaacacaaatcagtcaaatggaaaaaggtgaactaat
actaactaaagaaagccaagtcgtgaccactttgatatcaggaaaagtag
atttcacagcacaatttattactagagaagagaaaggccttttcataata
agaaaatggtcaatttgttttgaatgtgaccatgggtggctcagggatga
gcatctgtgtaggatgcacaagactctggattggtttccaagccctgaaa
aaagataagcaactgagtcataaacatagcatttacatgcctgataacag
agcttcaaaacacaagagcaaaaactcacagaggtggcaggagaaaaaaa
tctaaaagttttttgttggaattatatatatataagtattttcggttctt
caaactttagggaacaagtttgggaaatcattatggacagaaattctaga
tataaagaaatctgaagcccctttgaccaccgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_119313916_119315110
seq2: B6Ng01-161I14.b_50_1246 (reverse)

seq1  AGGATATGCCTA-GTCCTGAAGTGACGTAATGTGA-CATGGTGTGTTGGT  48
      |||||||||||| |||||  ||||||||||||||| ||||| ||||| ||
seq2  AGGATATGCCTATGTCCTAGAGTGACGTAATGTGACCATGG-GTGTT-GT  48

seq1  ACCCAGAGGAGAAGA-GGAGAAG--GCATGGGG-GATGAG-GCTGTCTTG  93
      ||||||||| ||||| |||| ||  || |||||  |||||  ||||||| 
seq2  ACCCAGAGG-GAAGAGGGAGGAGAAGCTTGGGGATATGAGCTCTGTCTTT  97

seq1  GGGGAGGGTG-ACTGGAAGGAGGGGGGCTGCAACTGAAA-TATAAAGTGA  141
      |||||| ||| ||  ||| || ||||||||||||||||| ||||||||||
seq2  GGGGAGCGTGAACCAGAAAGA-GGGGGCTGCAACTGAAATTATAAAGTGA  146

seq1  A-TGAATGAATGGATGAATGAATGAATGAGAAAGGAAAATACTCAGCATC  190
      | |||||| ||||||||||| ||||||||| ||||||||| |||||| ||
seq2  ATTGAATG-ATGGATGAATG-ATGAATGAGGAAGGAAAATTCTCAGC-TC  193

seq1  AAAAAGGACTAAAATTAAT-CCTTAAATGCAATTTGATTCTAGTCAAAAT  239
       |||||| || |||||||| |||||| |||||||||||| ||||||||||
seq2  CAAAAGG-CT-AAATTAATCCCTTAATTGCAATTTGATT-TAGTCAAAAT  240

seq1  ACCACGGGATTGCCCTTACAGAATCTGACAGGGT-AATTGTACGGTTGGT  288
      ||||| ||||||||||||||||||| |||||||| |||||||||||| ||
seq2  ACCAC-GGATTGCCCTTACAGAATC-GACAGGGTAAATTGTACGGTT-GT  287

seq1  CGGAGTGATAAATGAGTGCG-CATGGCTGAGGAAATTCTG-AAATTATCA  336
      | |||||||||||||||||| ||||||||||||||||||| |||||||||
seq2  CCGAGTGATAAATGAGTGCGCCATGGCTGAGGAAATTCTGAAAATTATCA  337

seq1  GTGGGGAAGAAGGCCACACACCAGAGACTATAACGTGGTACCCAGAGGTC  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGAAGAAGGCCACACACCAGAGACTATAACGTGGTACCCAGAGGTC  387

seq1  TAAACCACGTGATCCAGGGGAAGCGCTGCTCAGCTTCTGGTACCTAGAGG  436
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TAAACCACGTGATCCAGGGAAAGCGCTGCTCAGCTTCTGGTACCTAGAGG  437

seq1  TCTGGACCACGTGACCGGGGGACGCGCTGCTCAGCTTCCA-CCAGCTCAA  485
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCTGGACCACGTGACCGGGGGACGCGCTGCTCAGCTTCCACCCAGCTCAA  487

seq1  GGGTAAAGGGTTACACAGGGGACTGTAAGCTAGGCACACCCATAACAGCT  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAAGGGTTACACAGGGGACTGTAAGCTAGGCACACCCATAACAGCT  537

seq1  ACGTTTGAAATGATGACATCGTTAATTTCAAAATAGAAAACCACAATCGG  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTTGAAATGATGACATCGTTAATTTCAAAATAGAAAACCACAATCGG  587

seq1  GAAGGAACATAAACAACGCTGCTGTGTAAATGAAGCCGAGTGTGTTCATA  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAACATAAACAACGCTGCTGTGTAAATGAAGCCGAGTGTGTTCATA  637

seq1  GAAGCCAACACCTCACTGCTCTGCAATCTGTGCTCCGAGTTACAGCTGCA  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCAACACCTCACTGCTCTGCAATCTGTGCTCCGAGTTACAGCTGCA  687

seq1  AAAAATCTTTTTATTTCAAAAGGAAAGTTGGGGCTAGAGAGAGGGCTCAG  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCTTTTTATTTCAAAAGGAAAGTTGGGGCTAGAGAGAGGGCTCAG  737

seq1  CAGTTAAGAGCACTGGCTGCTCTCCTAGGAGATCCCAGTTCAATTCCCAG  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAAGAGCACTGGCTGCTCTCCTAGGAGATCCCAGTTCAATTCCCAG  787

seq1  CACCCACACGGTGGCTTACAATCATCTAATATCTAATCATTTCTAATATC  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACACGGTGGCTTACAATCATCTAATATCTAATCATTTCTAATATC  837

seq1  AGTCTCTCCGGGAATCTGACACCCTCTTCTGTCCTCCAAGGGCACTGAAT  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTCCGGGAATCTGACACCCTCTTCTGTCCTCCAAGGGCACTGAAT  887

seq1  GCATGCCGTGCGTGGACATACAGACACGCAGGCAAAACAATCCCGTACAC  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCCGTGCGTGGACATACAGACACGCAGGCAAAACAATCCCGTACAC  937

seq1  TCAGTTTCTGAAATGTTTTCAAAAGGAAATTTGTTGGCTTTTGAAAAAAC  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTCTGAAATGTTTTCAAAAGGAAATTTGTTGGCTTTTGAAAAAAC  987

seq1  TGTCACCAACAGTTGGGTATGGTGGTGAATGCCTGTGTTCCCAGCACTGA  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACCAACAGTTGGGTATGGTGGTGAATGCCTGTGTTCCCAGCACTGA  1037

seq1  GCAGGTGGAGGCAGGAGGATCAGGACATCCTCGAGGACATCCTCAGCTGT  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTGGAGGCAGGAGGATCAGGACATCCTCGAGGACATCCTCAGCTGT  1087

seq1  ACAAGTTTGAGGCCCGCTTAGTCTACATGGGATCTTGCCTCAAACAAGAG  1135
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTTTGAGGCCCGCTTAGTCTACATGGGATCTTGCCTCAAACAAGAG  1137

seq1  AAAGAAAACATACTGAAGAACAGTCTGGAACTGGGGGGATGTAGATCGGT  1185
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAACATACTGAAGAACAGTCTGGAACTGGGGGGATGTAGATCGGT  1187

seq1  GGAAGAATTC  1195
      ||||||||||
seq2  GGAAGAATTC  1197

seq1: chr8_119181501_119182488
seq2: B6Ng01-161I14.g_68_1051

seq1  GAATTCCCAGTACAATAAATGCAAAAATATTCACAGCCAGACATATCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGTACAATAAATGCAAAAATATTCACAGCCAGACATATCACA  50

seq1  GTGAAACGCTGGAATCCAAAGATAAAGACAAAAAAAAAATCCTTCAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAACGCTGGAATCCAAAGATAAAGACAAAAAAAAAATCCTTCAAGAA  100

seq1  GCAAGAAAAATCCGACTCATTCCTAACCAAGCAATTACAAGATACTGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAAAAATCCGACTCATTCCTAACCAAGCAATTACAAGATACTGAAC  150

seq1  TAACTTGTCAGCAAGGCACGGGACCAAGAACTTTTTAAAGGGATGCTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTGTCAGCAAGGCACGGGACCAAGAACTTTTTAAAGGGATGCTGTA  200

seq1  AAATTGAAGGCAAAATAAAGGCATTGCCAGATACGCAATAAAAGTGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGAAGGCAAAATAAAGGCATTGCCAGATACGCAATAAAAGTGAAAA  250

seq1  TATTTTCTGTAGAGCAACCACTAAAATTATAACTAAATACAGAGATAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCTGTAGAGCAACCACTAAAATTATAACTAAATACAGAGATAATA  300

seq1  TTCCAGATGATATTTAAGTTTCTAAATATTCAATTAATGGGAAATAAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGATGATATTTAAGTTTCTAAATATTCAATTAATGGGAAATAAAGC  350

seq1  AGAAAATTGAAAGGTATGGGATGACCAAGTAAATACAGAACAAACAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTGAAAGGTATGGGATGACCAAGTAAATACAGAACAAACAGAAA  400

seq1  ACAAACACAGAATTAAGAGCATGCAGATAGATAATATGAAAAAATCAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACACAGAATTAAGAGCATGCAGATAGATAATATGAAAAAATCAAAT  450

seq1  TCAAATGTTATAAACACTCAGTTTGAAAAGACTGAAGACAAGTGGTAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGTTATAAACACTCAGTTTGAAAAGACTGAAGACAAGTGGTAGGA  500

seq1  CACTTAAGTTGAGAAACACAAATCAGTCAAATGGAAAAAGGTGAACTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAAGTTGAGAAACACAAATCAGTCAAATGGAAAAAGGTGAACTAAT  550

seq1  ACTAACTAAAGAAAGCCAAGTCGTGACCACTTTGATATCAGGAAAAGTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACTAAAGAAAGCCAAGTCGTGACCACTTTGATATCAGGAAAAGTAG  600

seq1  ATTTCACAGCACAATTTATTACTAGAGAAGAGAAAGGCCTTTTCATAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCACAGCACAATTTATTACTAGAGAAGAGAAAGGCCTTTTCATAATA  650

seq1  AGAAAATGGTCAATTTGTTTTGAATGTGACCATGGGTGGCTCAGGGATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGGTCAATTTGTTTTGAATGTGACCATGGGTGGCTCAGGGATGA  700

seq1  GCATCTGTGTAGGATGCACAAGACTCTGGATTGGTTTCCAAGCCCTGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTGTGTAGGATGCACAAGACTCTGGATTGGTTTCCAAGCCCTGAAA  750

seq1  AAAGATAAGCAACTGAGTCATAAACATAGCATTTACATGCCTGATAACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAAGCAACTGAGTCATAAACATAGCATTTACATGCCTGATAACAG  800

seq1  AGCTTCAAAACACAAAGAGCAAAAACTCACAGAAGTGGCAGGAGAAAAAA  850
      ||||||||||||| ||||||||||||||||||| |||||||||| |||||
seq2  AGCTTCAAAACAC-AAGAGCAAAAACTCACAGAGGTGGCAGGAG-AAAAA  848

seq1  AATCTAAAAG-TTTTTGTTGGAAATATATATATATAAGTATAT--CGTTC  897
      |||||||||| |||||||||||| ||||||||||||||||| |   ||||
seq2  AATCTAAAAGTTTTTTGTTGGAATTATATATATATAAGTATTTTCGGTTC  898

seq1  TCAAAACTTAAGGGAACAAGTTATGGGAAAATCATTATAGACAGAAAATC  947
      |  |||||| |||||||||||| |||| |||||||||| |||||||| ||
seq2  TTCAAACTTTAGGGAACAAGTT-TGGG-AAATCATTATGGACAGAAATTC  946

seq1  TAGAATATAAGAAAATCTGAAAGCCACCATTGACCACAGTA  988
      ||| ||||||  ||||||| ||||| || |||||||| |||
seq2  TAG-ATATAAAGAAATCTG-AAGCC-CCTTTGACCACCGTA  984