BAC Information

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BAC

Clone NameB6Ng01-161M06
Chromosome8 (Build37)
Map Location 37,011,381 - 37,155,293
singlet/doubletdoublet
Overlap geneLOC671641
Upstream geneTnks, LOC666792, LOC666797, LOC666804, Ppp1r3b, Thex1, Mfhas1, LOC100041572, Gm501, Cldn23
Downstream geneD8Ertd82e, Lonrf1, EG544878, 6430573F11Rik, Dlc1, LOC100042892, A730069N07Rik, AI429214
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-161M06.bB6Ng01-161M06.g
ACCDH954788DH954789
length464231
definitionDH954788|Mus musculus domesticus DNA, BAC clone: B6Ng01-161M06, 5' end.DH954789|Mus musculus domesticus DNA, BAC clone: B6Ng01-161M06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,011,381 - 37,011,844)(37,155,063 - 37,155,293)
sequence
gaattcttccatcccaagcctctgtgctttgtcacactgaaataaatgtc
ccatgtagtagactaatgtctagctctagccattccctcactgaagttca
acaaacactcatgtgcttctgctgatctgtcttatagcaattctgttcta
tggtagagcctccccacacctccgaaaaacgcttgagagagcagatgtaa
aattgtgtctctcttgcagcttatttgtaaatactggatatgtttttctt
agacagctaacaattttatcaataatttttaagtccataaagctacaact
cggctcaacctgtgcatgcattcgtttctgcccctgggcactctgcactc
atcctctgtcaacttgataagtcactaaaggcattttgccctcttggaaa
atggagccaatataaatcattactctcaggataggggtgacagtggtggt
gggggcgggggggg
tcatgcccggtctttctccatctggatgaaacagaaatgcctctcacctt
aatgtcagaaaggtgttcaatttcagtccattaatatttatcgagttgct
tctccttaggaagttatagggaaaaagtaagagacaaatagaagcactcg
gaagggaatggaagtgagtcaggtagggagagagagagagagagagagag
agagagagagagagagagagagagagagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_37011381_37011844
seq2: B6Ng01-161M06.b_41_504

seq1  GAATTCTTCCATCCCAAGCCTCTGTGCTTTGTCACACTGAAATAAATGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCATCCCAAGCCTCTGTGCTTTGTCACACTGAAATAAATGTC  50

seq1  CCATGTAGTAGACTAATGTCTAGCTCTAGCCATTCCCTCACTGAAGTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTAGTAGACTAATGTCTAGCTCTAGCCATTCCCTCACTGAAGTTCA  100

seq1  ACAAACACTCATGTGCTTCTGCTGATCTGTCTTATAGCAATTCTGTTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACACTCATGTGCTTCTGCTGATCTGTCTTATAGCAATTCTGTTCTA  150

seq1  TGGTAGAGCCTCCCCACACCTCCGAAAAACGCTTGAGAGAGCAGATGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGAGCCTCCCCACACCTCCGAAAAACGCTTGAGAGAGCAGATGTAA  200

seq1  AATTGTGTCTCTCTTGCAGCTTATTTGTAAATACTGGATATGTTTTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGTCTCTCTTGCAGCTTATTTGTAAATACTGGATATGTTTTTCTT  250

seq1  AGACAGCTAACAATTTTATCAATAATTTTTAAGTCCATAAAGCTACAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCTAACAATTTTATCAATAATTTTTAAGTCCATAAAGCTACAACT  300

seq1  CGGCTCAACCTGTGCATGCATTCGTTTCTGCCCCTGGGCACTCTGCACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTCAACCTGTGCATGCATTCGTTTCTGCCCCTGGGCACTCTGCACTC  350

seq1  ATCCTCTGTCAACTTGATAAGTCACTAAAGGCATTTTGCCCTCTTGGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTGTCAACTTGATAAGTCACTAAAGGCATTTTGCCCTCTTGGAAA  400

seq1  ATGGAGCCAATATAAATCATTACTCTCAGGATAGGGGTGACAGTGGTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGCCAATATAAATCATTACTCTCAGGATAGGGGTGACAGTGGTGGT  450

seq1  GGGGGCGGGGGGGG  464
      ||||||||||||||
seq2  GGGGGCGGGGGGGG  464

seq1: chr8_37155063_37155293
seq2: B6Ng01-161M06.g_75_305 (reverse)

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  50

seq1  TCTCCCTACCTGACTCACTTCCATTCCCTTCCGAGTGCTTCTATTTGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTACCTGACTCACTTCCATTCCCTTCCGAGTGCTTCTATTTGTCT  100

seq1  CTTACTTTTTCCCTATAACTTCCTAAGGAGAAGCAACTCGATAAATATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTTTTCCCTATAACTTCCTAAGGAGAAGCAACTCGATAAATATTA  150

seq1  ATGGACTGAAATTGAACACCTTTCTGACATTAAGGTGAGAGGCATTTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACTGAAATTGAACACCTTTCTGACATTAAGGTGAGAGGCATTTCTG  200

seq1  TTTCATCCAGATGGAGAAAGACCGGGCATGA  231
      |||||||||||||||||||||||||||||||
seq2  TTTCATCCAGATGGAGAAAGACCGGGCATGA  231