BAC Information

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BAC

Clone NameB6Ng01-163L13
Chromosome8 (Build37)10 (Build37)
Map Location 130,951,780 - 130,952,94324,712,428 - 24,713,321
singlet/doubletsingletsinglet
Overlap geneNrp1
Upstream genePard3, EG628847
Downstream geneLOC668494, Itgb1, LOC100042659, LOC100042667, Ccdc7, 1700008F21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163L13.bB6Ng01-163L13.g
ACCDH956236DH956237
length1,1541,009
definitionDH956236|Mus musculus domesticus DNA, BAC clone: B6Ng01-163L13, 5' end.DH956237|Mus musculus domesticus DNA, BAC clone: B6Ng01-163L13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(130,951,780 - 130,952,943)(24,712,428 - 24,713,321)
sequence
gaattcaaggcatgcaggttgggaatcacatgtctccatttctcattctc
tggaagcttggtggatccacaagttctcaagggattggtacagagagtca
acctgtctctgcaaaggatactatatatttgtgtggaatggacaatggaa
ccagggaatgatgagctcacaccactgttgtgccttctctgctggagctg
ggaagaacgatcagaacttagatgtcactgacattgcagaagtgattagc
agaatcaagaatgattttcttgagagttagatgaatgctattgtttttta
ttgacttttacatttaaagtagcctagtaagacaatgatagaaataaatg
tgcaaactctagagattctctactgatttgctgaatacattatgaatagt
taagtggcctggctagtgcctatgaaatgattcctttctgatgtattaac
attatctcactctaaaagtacctctttagatgggcatagtcttatatata
taatcccagaacttggaaggcttaagtaagattactgagttcaaggttca
tgcaggcaatacagcaagtaccaggctatctcaaaaaatgaaaacaaaga
aacaaataagaaacaaagacttttctttttttgcttttcttcatataaga
agacagaagactacattattttcagtctgaagtagggcaattattactgg
aaagaataaatggagtgaggtactgtcatctaagcaagacagacatcttt
tcaccttcacatccaacctgatagagctggggtcttgcttttcagagctt
gtatatccctcttactaaagttctcagtaatttacttttgcattatactt
ctaggcttgttgatctttttggcctttgggtccacaattacaaaaagaag
aaaacagtagccctgttcaataaaccacaaatgagcacatatgtgtgcat
gaggcgccttgtcctcctggctcagatcatattgcattagcttgcgagct
gaggttccctgtgctcacgaaattcaatacctctttgtattattgtcgcc
aagccttacacttccgtatcttggaggccctaaggagacatacaggatct
gtctgagggcaatgttctaaagacagaaggcaagattaccccagtaatgc
ctcc
gaattcacttcttaatgcttttcctgaatgtttctcactgtttctctgac
acatgtgtggacgcccgactcgccagcaaggaagacgccacaacaggatt
cttctgcacacgtttattgggagagcttgatagagaaggcgaaagacccc
aagccccagaactggcactgcttatataggcctaggagtggcatgtctat
acctgattggttgtgctttcagtacctcatttacattccccgggatgggc
tgtgatgtggagcgaaacccttatgcacatgtgcacattggttgtttacc
cgaacttatgggcggtggccagcggtagccagcgccatcttgtaatggtg
taagtggcttttcacatctccctcttttttattattatggcctaatccaa
cgatctagttgctagcctcttcagctcgcaacaatcaagaaggatctcat
ttttggcagaccatgatcaccctatcgcgtgcaatgggcttagcctcagt
gatgtgcaagggctgatcaaggaaatcgagtcttactcatcccagtgcaa
tgggtacacagactcgtggggtgctagagctaaggactcgaatgcctatt
atttatgtagcatgaatacttcagaggaggccccttgttcaatggccatg
agtgcttgggtgatggccaccttgtcacgtttctgttgagatctgaactt
gcaaaccaaccaaagcatgaataccaatccacagcatatggcatcgccaa
aaagaacaactcccacccactccttaaagtaggaaaatgcagaagtaagc
caagaggtaaaatcgccaacagtgatgggttctattcgagttccattaag
gcttaaaatctggcattagatgtaaagaattgaggaaacacttgaatgcg
tcaacggcatgattttcaggacacagagctctcagttctcactagcggga
gcattcccagccacaggaacaccatgtcctcacggctccactgccctgaa
tgctctggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_130951780_130952943
seq2: B6Ng01-163L13.b_44_1197

seq1  GAATTCAAGGCATGCAGGTTGGGAATCACATGTCTCCATTTCTCATTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCATGCAGGTTGGGAATCACATGTCTCCATTTCTCATTCTC  50

seq1  TGGAAGCTTGGTGGATCCACAAGTTCTCAAGGGATTGGTACAGAGAGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCTTGGTGGATCCACAAGTTCTCAAGGGATTGGTACAGAGAGTCA  100

seq1  ACCTGTCTCTGCAAAGGATACTATATATTTGTGTGGAATGGACAATGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTCTCTGCAAAGGATACTATATATTTGTGTGGAATGGACAATGGAA  150

seq1  CCAGGGAATGATGAGCTCACACCACTGTTGTGCCTTCTCTGCTGGAGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGAATGATGAGCTCACACCACTGTTGTGCCTTCTCTGCTGGAGCTG  200

seq1  GGAAGAACGATCAGAACTTAGATGTCACTGACATTGCAGAAGTGATTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAACGATCAGAACTTAGATGTCACTGACATTGCAGAAGTGATTAGC  250

seq1  AGAATCAAGAATGATTTTCTTGAGAGTTAGATGAATGCTATTGTTTTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCAAGAATGATTTTCTTGAGAGTTAGATGAATGCTATTGTTTTTTA  300

seq1  TTGACTTTTACATTTAAAGTAGCCTAGTAAGACAATGATAGAAATAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTTTACATTTAAAGTAGCCTAGTAAGACAATGATAGAAATAAATG  350

seq1  TGCAAACTCTAGAGATTCTCTACTGATTTGCTGAATACATTATGAATAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACTCTAGAGATTCTCTACTGATTTGCTGAATACATTATGAATAGT  400

seq1  TAAGTGGCCTGGCTAGTGCCTATGAAATGATTCCTTTCTGATGTATTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGGCCTGGCTAGTGCCTATGAAATGATTCCTTTCTGATGTATTAAC  450

seq1  ATTATCTCACTCTAAAAGTACCTCTTTAGATGGGCATAGTCTTATATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTCACTCTAAAAGTACCTCTTTAGATGGGCATAGTCTTATATATA  500

seq1  TAATCCCAGAACTTGGAAGGCTTAAGTAAGATTACTGAGTTCAAGGTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCCAGAACTTGGAAGGCTTAAGTAAGATTACTGAGTTCAAGGTTCA  550

seq1  TGCAGGCAATACAGCAAGTACCAGGCTATCTCAAAAAATGAAAACAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGCAATACAGCAAGTACCAGGCTATCTCAAAAAATGAAAACAAAGA  600

seq1  AACAAATAAGAAACAAAGACTTTTCTTTTTTTGCTTTTCTTCATATAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATAAGAAACAAAGACTTTTCTTTTTTTGCTTTTCTTCATATAAGA  650

seq1  AGACAGAAGACTACATTATTTTCAGTCTGAAGTAGGGCAATTATTACTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAAGACTACATTATTTTCAGTCTGAAGTAGGGCAATTATTACTGG  700

seq1  AAAGAATAAATGGAGTGAGGTACTGTCATCTAAGCAAGACAGACATCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATAAATGGAGTGAGGTACTGTCATCTAAGCAAGACAGACATCTTT  750

seq1  TCACCTTCACATCCAACCTGATAGAGCTGGGGTCTTGCTTTTCAGAGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTTCACATCCAACCTGATAGAGCTGGGGTCTTGCTTTTCAGAGCTT  800

seq1  GTATATCCCTCTTACTAAAGTTCTCAGTAATTTACTTTTGCATTATACTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATCCCTCTTACTAAAGTTCTCAGTAATTTACTTTTGCATTATACTT  850

seq1  CTAGGCTTGGTGATCTTTTTGGCCTTTGGGTCCACAATTACAAAAAGAAG  900
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCTTGTTGATCTTTTTGGCCTTTGGGTCCACAATTACAAAAAGAAG  900

seq1  AAAACAGTAGCCCTGTTCAAATAAACCACAAATGAGCACATATGTTGTGC  950
      |||||||||||||||||| ||||||||||||||||||||||||| |||||
seq2  AAAACAGTAGCCCTGTTC-AATAAACCACAAATGAGCACATATG-TGTGC  948

seq1  ATGAGGGCGCCTTGTCCTCCTGGCTCAGATCAATATTGCATTAGCTTGCG  1000
      |||| |||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATGA-GGCGCCTTGTCCTCCTGGCTCAGATC-ATATTGCATTAGCTTGCG  996

seq1  AAGCTGAGGTTCCCCTGTTGCTCACGAAAATTCAATACCTCTTTGTATTA  1050
       |||||||||| ||||| |||||||| |||||||||||||||||||||||
seq2  -AGCTGAGGTT-CCCTG-TGCTCACG-AAATTCAATACCTCTTTGTATTA  1042

seq1  TTGTCGCCAAAGCCTTACACTTTCGTATCTTGAGGGCTCCTAAGGAGACA  1100
      |||||||| ||||||||||||| |||||||||  ||| ||||||||||||
seq2  TTGTCGCC-AAGCCTTACACTTCCGTATCTTGGAGGC-CCTAAGGAGACA  1090

seq1  TACAGGGATCTGTCTGAGGGCAATGTTCTAAAAGACAGAAGGC-AGATTT  1149
      |||| |||||||||||||||||||||||| ||||||||||||| ||||| 
seq2  TACA-GGATCTGTCTGAGGGCAATGTTCT-AAAGACAGAAGGCAAGATTA  1138

seq1  ACCCAGT-ATGCCTCC  1164
       |||||| ||||||||
seq2  CCCCAGTAATGCCTCC  1154

seq1: chr10_24712428_24713321
seq2: B6Ng01-163L13.g_124_1009

seq1  GTGTGGACGCCCGACTCACCAGCAAGGAAGAAGCCACAACAGGATTCTTC  50
      ||||||||||||||||| ||||||||||||| ||||||||||||||||||
seq2  GTGTGGACGCCCGACTCGCCAGCAAGGAAGACGCCACAACAGGATTCTTC  50

seq1  TGCACACGTTTATTGGGAGAGCTTGATAGAGAAGGCGAAAGACCCCGAGC  100
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGCACACGTTTATTGGGAGAGCTTGATAGAGAAGGCGAAAGACCCCAAGC  100

seq1  CCCAGAACTGGCACTGCTTATATAGGCCTAGGAGTGGCGTGTCTATACCT  150
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCCAGAACTGGCACTGCTTATATAGGCCTAGGAGTGGCATGTCTATACCT  150

seq1  GATTGGTTGTGCTTTCAGTACCTCATTTACATTCTCCGGGATGGGCTGTG  200
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GATTGGTTGTGCTTTCAGTACCTCATTTACATTCCCCGGGATGGGCTGTG  200

seq1  ACGTGGTGCGAAACCCTTATGCACATGCACACATTGGGTTGTTTACCCGA  250
      | |||| ||||||||||||||||||||  |||||| ||||||||||||||
seq2  ATGTGGAGCGAAACCCTTATGCACATGTGCACATT-GGTTGTTTACCCGA  249

seq1  ACTTATGGGCGGTGGCCAGTGGTAGCCAGCGCCATCTTGTAATGGCATAT  300
      ||||||||||||||||||| |||||||||||||||||||||||||  || 
seq2  ACTTATGGGCGGTGGCCAGCGGTAGCCAGCGCCATCTTGTAATGGTGTAA  299

seq1  GTGGCTTCCCACATCTCCCCCTTTATTATTATTATGGCCTAATCCAACTA  350
      |||||||  |||||||||| |||| ||||||||||||||||||||||| |
seq2  GTGGCTTTTCACATCTCCCTCTTTTTTATTATTATGGCCTAATCCAACGA  349

seq1  TCTAGTCGCTAGCCTCTTCAGCTCGCAACGATCAAGAAGGATCTCGTTTT  400
      |||||| |||||||||||||||||||||| ||||||||||||||| ||||
seq2  TCTAGTTGCTAGCCTCTTCAGCTCGCAACAATCAAGAAGGATCTCATTTT  399

seq1  TGGCAGACCATGATCACCCTATCTCATGCAATGGGCATAGTCTCAGCAAT  450
      ||||||||||||||||||||||| | |||||||||| ||| |||||  ||
seq2  TGGCAGACCATGATCACCCTATCGCGTGCAATGGGCTTAGCCTCAGTGAT  449

seq1  GTGCAAGGGCTGATCAAGGAAAT-GAGTCTTACTCATCCCAGTGCAATGG  499
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTGCAAGGGCTGATCAAGGAAATCGAGTCTTACTCATCCCAGTGCAATGG  499

seq1  GTACACAGACCCGTGGGGTGCTTGAGCTAAGGACTCGAATGCCTATTATT  549
      |||||||||| ||||||||||| |||||||||||||||||||||||||||
seq2  GTACACAGACTCGTGGGGTGCTAGAGCTAAGGACTCGAATGCCTATTATT  549

seq1  TATGTAGCATGGATAACTATACTTCAGAGGAGGCCCCTTGTTCAATGGCC  599
      |||||||||||       ||||||||||||||||||||||||||||||||
seq2  TATGTAGCATG------AATACTTCAGAGGAGGCCCCTTGTTCAATGGCC  593

seq1  ATGAGTGCTTGGGTGATGGTCACCTTGTCACGTTTCTGTTGAGATCTGAA  649
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATGAGTGCTTGGGTGATGGCCACCTTGTCACGTTTCTGTTGAGATCTGAA  643

seq1  CTTGCAAACCAACCAAAGCATGAATACCAATCCACAGCATCTGGCAGCGC  699
      |||||||||||||||||||||||||||||||||||||||| ||||| |||
seq2  CTTGCAAACCAACCAAAGCATGAATACCAATCCACAGCATATGGCATCGC  693

seq1  CAAAAAGAACAACTCCCACCCACTCCTTAAAGGAGGAAAATGCAGAGGTA  749
      |||||||||||||||||||||||||||||||| ||||||||||||| |||
seq2  CAAAAAGAACAACTCCCACCCACTCCTTAAAGTAGGAAAATGCAGAAGTA  743

seq1  AGCCAAGAGGTAAAATCACCAACAGTGATGGGTTCTATTCAAGTTCCATT  799
      ||||||||||||||||| |||||||||||||||||||||| |||||||||
seq2  AGCCAAGAGGTAAAATCGCCAACAGTGATGGGTTCTATTCGAGTTCCATT  793

seq1  AAGGCTTAAAATCTGGCATTAGATGTAAAGAATTGAGGAAACACTTGAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTAAAATCTGGCATTAGATGTAAAGAATTGAGGAAACACTTGAAT  843

seq1  GTGTCAATGGCATGGTTTTCAGGAACACAGAGCTCTTCAGTTCTC  894
      | ||||| |||||| |||||||| ||||||||||| |||||||||
seq2  GCGTCAACGGCATGATTTTCAGG-ACACAGAGCTC-TCAGTTCTC  886