BAC Information

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BAC

Clone NameB6Ng01-163O12
Chromosome8 (Build37)
Map Location 129,684,084 - 129,860,516
singlet/doubletdoublet
Overlap genePard3
Upstream geneSlc35f3, LOC668434, 1810063B05Rik, EG619653, Irf2bp2, Tomm20, Rbm34, LOC100043368, Gabarapl2-ps8_1688.1
Downstream geneEG628847
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163O12.bB6Ng01-163O12.g
ACCDH956374DH956375
length1,188981
definitionDH956374|Mus musculus domesticus DNA, BAC clone: B6Ng01-163O12, 5' end.DH956375|Mus musculus domesticus DNA, BAC clone: B6Ng01-163O12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,859,325 - 129,860,516)(129,684,084 - 129,685,066)
sequence
gaattcattcctgttgaatctaagtggctgcctagtagttatgagtcctt
acaagaagaaaggcaagtagcagagaagctacccaaagaactcgtccaga
ggccatcctgaactcctggaggcaaagcagaagggagcttctgccagata
ttcaaaagcccagaaatgaatcaccagaaggacaaagagaatgcccgaga
gtcaacttgctggttggaggcagccggttactgaggagtccttcacccac
ttctcagctacctgcaaggagctacacagacccctaaacaacaacaacaa
aaaaaaaaaactatcactctacacaaacagcttctaatagctccctagca
accttctcctaactatccttttgtggccaaacacatcacagaacttatcc
tggaacaagaagcattgtgctgttccaatctggattgctttgatatgcat
aaccagtaggggcaaactgtgtccactcaagttgtaggggaaatcctctc
cttactatcttaagcctgcgcctgactagacatacctatgattaaagtcg
gatgtatcgtgggaaaggacaggcacagttacaaaagcttatacaatcca
agactgtcaattaaaacaagaatcgactcataccatggctagcaaacagc
tctccctggcctttgaaaagaagcccaagaagtaaaacagggtctcttga
atgcatcccattcctgaacctctttccccctccccttcctgttcaggtac
tttgctcttgaataaaagcccttggtaataaaccaattctatgcatttct
tcaattctttgaacaaaatcttgtgcagacagagacttcagttaagtttc
aagcacaacagaacaaaacacgtttcatcttaatgcaaatactgtacatg
ttaccatctaaacatgtaacagaagaaattaagattaatagtaaagtatt
atctaacatcattcccaagttaaaaagaagggcttttttatacttcaaaa
agtaattgtatagacagataaatatattatttgcagtgttcatattagac
aactaaattagcaaaaaaagaagttgtaacaatttgcccaagggggtgga
ctctcttaaaaataataaatacaattattttattgaaatagagacctgtt
attttttgccaagccgcaaaattgttttcctttctcaa
gaattctgtgtaatgggaaatcagtgtaacttttgtgtagcaattctgtg
tttttgggaaatctatgggcagcattgttttgtatttctatatgagcaca
cacattgaagttttattgagtttaagggcagctgtgcccttctcaaatta
cttgaaaacaagatgtgtgagtgtgtttaaatacaccaataaggaatatt
taaaagttttaagtgctgtcctttttctctttttctcccccagttccacc
ttggagtaaaaggacctgcatcacacatttcgatggattgctttaaatag
tgtattacacacatatgtatgtctgctgggtttgacttttttttttggtt
tttcgagacagggtttctcagtgtagctctggctgtcctgtaactcactc
tgtagaccaggtttgcctcgagcttagaaatccacctgcctctgcctccc
aaatgccgggattaaaggcatgtgccaccactgcccggcaggtttgactt
tttaaaacaaaggctcacacctcagccttcttggttcatgtgccaacttg
tcaacagctccgtctgtccaggcggaggacaggcgtctgtttgagaggag
tacgtaactctccagggtgtgcggcgtgctgtctgcagattagcagatgt
gagatttcagatgcagaatgtgtgctgctcatgtttttaggtttctatag
attgttctgcaggggttcttgcatggcttgtatatcagacaaggaaaagt
ctgatctgcttgagagaaatcagagtcttgtgagggcgggagttttcctg
tcgccataatggatggtatggagccaaggggagtatatatgaatgaccta
ttcatagaggaagaggaagactgactccgccatgagttgaactctggctg
gggttttaattagctgtatatattgacgttccctttcacggtcagcaagc
tattaagtttaagtcactgaattccctttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_129859325_129860516
seq2: B6Ng01-163O12.b_46_1233 (reverse)

seq1  TTGAGAAAGAGAAACATATTTTTGCGGCTTGGCCAAAAATAACAGGTCTC  50
      |||||||||  ||||  | |||||||||||||| ||||||||||||||||
seq2  TTGAGAAAGGAAAAC--AATTTTGCGGCTTGGCAAAAAATAACAGGTCTC  48

seq1  TATTCAAATAAAAATATTGTATTTATTATTTTTAAGAG-GTCCACCCCAC  99
      ||||  |||||||  ||||||||||||||||||||||| |||||||||  
seq2  TATTTCAATAAAATAATTGTATTTATTATTTTTAAGAGAGTCCACCCCCT  98

seq1  TGGGCAATGTGTTACA--CTCTTTTTTTGCTAATTTAGTTGTCTAATATT  147
      |||||||  |||||||   |||||||||||||||||||||||||||||| 
seq2  TGGGCAAATTGTTACAACTTCTTTTTTTGCTAATTTAGTTGTCTAATAT-  147

seq1  GGACAACTGACAATATATATTTTTTTTCTGTCTTAATACAATTACTTTTT  197
       ||  ||||  |||| ||| | ||| |||||||  |||||||||||||||
seq2  -GAACACTGCAAATA-ATA-TATTTATCTGTCT--ATACAATTACTTTTT  192

seq1  GAAGTAT-AAAAAGCCCTTCCTTTTTAACTTGGGAATGATGTTAGATAAT  246
      ||||||| ||||||||||| ||||||||||||||||||||||||||||||
seq2  GAAGTATAAAAAAGCCCTT-CTTTTTAACTTGGGAATGATGTTAGATAAT  241

seq1  ACTTTACTATTAATCTTAATTTCTTCTGTTACATGTTTAGATGGTAACAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTACTATTAATCTTAATTTCTTCTGTTACATGTTTAGATGGTAACAT  291

seq1  GTACAGTATTTGCATTAAGATG-AACGTGTTTTGTTCTGTTGTGCTTGAA  345
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GTACAGTATTTGCATTAAGATGAAACGTGTTTTGTTCTGTTGTGCTTGAA  341

seq1  ACTTAACTGAAGTCTCTGTCTGCACAAGATTTTGTTCAAAGAATTGAAGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAACTGAAGTCTCTGTCTGCACAAGATTTTGTTCAAAGAATTGAAGA  391

seq1  AATGCATAGAATTGGTTTATTACCAAGGGCTTTTATTCAAGAGCAAAGTA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATAGAATTGGTTTATTACCAAGGGCTTTTATTCAAGAGCAAAGTA  441

seq1  CCTGAACAGGAAGGGGAGGGGGAAAGAGGTTCAGGAATGGGATGCATTCA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAACAGGAAGGGGAGGGGGAAAGAGGTTCAGGAATGGGATGCATTCA  491

seq1  AGAGACCCTGTTTTACTTCTTGGGCTTCTTTTCAAAGGCCAGGGAGAGCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACCCTGTTTTACTTCTTGGGCTTCTTTTCAAAGGCCAGGGAGAGCT  541

seq1  GTTTGCTAGCCATGGTATGAGTCGATTCTTGTTTTAATTGACAGTCTTGG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTAGCCATGGTATGAGTCGATTCTTGTTTTAATTGACAGTCTTGG  591

seq1  ATTGTATAAGCTTTTGTAACTGTGCCTGTCCTTTCCCACGATACATCCGA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATAAGCTTTTGTAACTGTGCCTGTCCTTTCCCACGATACATCCGA  641

seq1  CTTTAATCATAGGTATGTCTAGTCAGGCGCAGGCTTAAGATAGTAAGGAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATCATAGGTATGTCTAGTCAGGCGCAGGCTTAAGATAGTAAGGAG  691

seq1  AGGATTTCCCCTACAACTTGAGTGGACACAGTTTGCCCCTACTGGTTATG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTCCCCTACAACTTGAGTGGACACAGTTTGCCCCTACTGGTTATG  741

seq1  CATATCAAAGCAATCCAGATTGGAACAGCACAATGCTTCTTGTTCCAGGA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCAAAGCAATCCAGATTGGAACAGCACAATGCTTCTTGTTCCAGGA  791

seq1  TAAGTTCTGTGATGTGTTTGGCCACAAAAGGATAGTTAGGAGAAGGTTGC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTCTGTGATGTGTTTGGCCACAAAAGGATAGTTAGGAGAAGGTTGC  841

seq1  TAGGGAGCTATTAGAAGCTGTTTGTGTAGAGTGATAGTTTTTTTTTTTTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAGCTATTAGAAGCTGTTTGTGTAGAGTGATAGTTTTTTTTTTTTG  891

seq1  TTGTTGTTGTTTAGGGGTCTGTGTAGCTCCTTGCAGGTAGCTGAGAAGTG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTGTTTAGGGGTCTGTGTAGCTCCTTGCAGGTAGCTGAGAAGTG  941

seq1  GGTGAAGGACTCCTCAGTAACCGGCTGCCTCCAACCAGCAAGTTGACTCT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAGGACTCCTCAGTAACCGGCTGCCTCCAACCAGCAAGTTGACTCT  991

seq1  CGGGCATTCTCTTTGTCCTTCTGGTGATTCATTTCTGGGCTTTTGAATAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCATTCTCTTTGTCCTTCTGGTGATTCATTTCTGGGCTTTTGAATAT  1041

seq1  CTGGCAGAAGCTCCCTTCTGCTTTGCCTCCAGGAGTTCAGGATGGCCTCT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAGAAGCTCCCTTCTGCTTTGCCTCCAGGAGTTCAGGATGGCCTCT  1091

seq1  GGACGAGTTCTTTGGGTAGCTTCTCTGCTACTTGCCTTTCTTCTTGTAAG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGAGTTCTTTGGGTAGCTTCTCTGCTACTTGCCTTTCTTCTTGTAAG  1141

seq1  GACTCATAACTACTAGGCAGCCACTTAGATTCAACAGGAATGAATTC  1192
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCATAACTACTAGGCAGCCACTTAGATTCAACAGGAATGAATTC  1188

seq1: chr8_129684084_129685066
seq2: B6Ng01-163O12.g_71_1051

seq1  GAATTCTGTGTTTTGGGAAATCAGTGTAACTTTTGTGTAGCAATTCTGTG  50
      |||||||||||  |||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGTAATGGGAAATCAGTGTAACTTTTGTGTAGCAATTCTGTG  50

seq1  TTTTTGGGAAATCTATGGGCAGCATTGTTTTGTATTTCTATATGAGCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGGAAATCTATGGGCAGCATTGTTTTGTATTTCTATATGAGCACA  100

seq1  CACATTGAAGTTTTATTGAGTTTAAGGGCAGCTGTGCCCTTCTCAAATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTGAAGTTTTATTGAGTTTAAGGGCAGCTGTGCCCTTCTCAAATTA  150

seq1  CTTGAAAACAAGATGTGTGAGTGTGTTTAAATACACCAATAAGGAATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAAACAAGATGTGTGAGTGTGTTTAAATACACCAATAAGGAATATT  200

seq1  TAAAAGTTTTAAGTGCTGTCCTTTTTCTCTTTTTCTCCCCCAGTTCCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTTTTAAGTGCTGTCCTTTTTCTCTTTTTCTCCCCCAGTTCCACC  250

seq1  TTGGAGTAAAAGGACCTGCATCACACATTTCGATGGATTGCTTTAAATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTAAAAGGACCTGCATCACACATTTCGATGGATTGCTTTAAATAG  300

seq1  TGTATTACACACATATGTATGTCTGCTGGGTTTGACTTTTTTTTTTGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTACACACATATGTATGTCTGCTGGGTTTGACTTTTTTTTTTGGTT  350

seq1  TTTCGAGACAGGGTTTCTCAGTGTAGCTCTGGCTGTCCTGTAACTCACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGAGACAGGGTTTCTCAGTGTAGCTCTGGCTGTCCTGTAACTCACTC  400

seq1  TGTAGACCAGGTTTGCCTCGAGCTTAGAAATCCACCTGCCTCTGCCTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACCAGGTTTGCCTCGAGCTTAGAAATCCACCTGCCTCTGCCTCCC  450

seq1  AAATGCCGGGATTAAAGGCATGTGCCACCACTGCCCGGCAGGTTTGACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCGGGATTAAAGGCATGTGCCACCACTGCCCGGCAGGTTTGACTT  500

seq1  TTTAAAACAAAGGCTCACACCTCAGCCTTCTTGGTTCATGTGCCAACTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAACAAAGGCTCACACCTCAGCCTTCTTGGTTCATGTGCCAACTTG  550

seq1  TCAACAGCTCCGTCTGTCCAGGCGGAGGACAGGCGTCTGTTTGAGAGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAGCTCCGTCTGTCCAGGCGGAGGACAGGCGTCTGTTTGAGAGGAG  600

seq1  TACGTAACTCTCCAGGGTGTGCGGCGTGCTGTCTGCAGATTAGCAGATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTAACTCTCCAGGGTGTGCGGCGTGCTGTCTGCAGATTAGCAGATGT  650

seq1  GAGATTTCAGATGCAGAATGTGTGCTGCTCATG-TTTTAGGTTTCTATAG  699
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GAGATTTCAGATGCAGAATGTGTGCTGCTCATGTTTTTAGGTTTCTATAG  700

seq1  ATTGTTCTGCAGGGGTTCTTGCATGGCTTGTATATCAGACAAGGAAAAGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTCTGCAGGGGTTCTTGCATGGCTTGTATATCAGACAAGGAAAAGT  750

seq1  CTGATCTGCTTGAGAGAAATCAGAGTCTTGTGAGGGCGGGAGTTTTCCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCTGCTTGAGAGAAATCAGAGTCTTGTGAGGGCGGGAGTTTTCCTG  800

seq1  TCGCCATAATGGATGGTATGGAGCCAAGGGGAAGTATATATGAATGACCT  849
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCGCCATAATGGATGGTATGGAGCCAAGGGG-AGTATATATGAATGACCT  849

seq1  ATTCATAGAGGAAGAGGAAGACTGACTCCGCCATGAGTTGAACTCTGGCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAGAGGAAGAGGAAGACTGACTCCGCCATGAGTTGAACTCTGGCT  899

seq1  GGGGTTTTAATTAGCTGTAATATTATTGACGTTCCCTTTCACGGTCAGCA  949
      |||||||||||||||||| ||| |||||||||||||||||||||||||||
seq2  GGGGTTTTAATTAGCTGT-ATA-TATTGACGTTCCCTTTCACGGTCAGCA  947

seq1  AGCTATTAGGTTTAAGTCACTGAATTCCCTTTCA  983
      |||||||| |||||||||||||||||||||||||
seq2  AGCTATTAAGTTTAAGTCACTGAATTCCCTTTCA  981