BAC Information

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BAC

Clone NameB6Ng01-164K22
Chromosome8 (Build37)
Map Location 36,293,652 - 36,432,430
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC619780, LOC666718, EG234159, LOC666746, Dusp4, LOC675578, Tnks, LOC666792, LOC666797, LOC666804
Downstream genePpp1r3b, Thex1, Mfhas1, LOC100041572, Gm501, Cldn23, LOC671641, D8Ertd82e, Lonrf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164K22.bB6Ng01-164K22.g
ACCDH956939DH956940
length955693
definitionDH956939|Mus musculus domesticus DNA, BAC clone: B6Ng01-164K22, 5' end.DH956940|Mus musculus domesticus DNA, BAC clone: B6Ng01-164K22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,431,877 - 36,432,430)(36,293,652 - 36,294,344)
sequence
gaattctagagcctcctcttcctccttcttacccttcttctccgcctccc
tcctcttctttttcctcttcctcctccttctcttcctccccctcctcctt
gcccttcttttctttttccccatccttctttttccctttgttccccctca
actttgtcattcatctcttcctcctgctctcccccctcctcccctcccct
cctcttcttcttcatttttatttttcaaggcagggtttctctgtgtagtc
ctggctgtcctggaactcactcttgtagaccaggctgacctcgaactaag
agatctgcccacctctgcctcctgagtgctgggattaacggtgtgtatca
ccacttctgggtgaaatcttgtcttcttgaggtgtcagggcccttgttct
catgaacagctgtagccaacttcaagggtgtgactcatgctccaggggat
ggttctacactgtatatatgggcagtacctactggactctgcgggttatt
agaaaaaagaagacatgaaattagaaggaggattgaattatctgtaaaaa
agttttggggaatggagatggatatgacgaaaatatgttttgtacatgta
tggcatttttaaacataagcaaaattaaaaaaattacaaacaggttagtt
tctagtttccatgttagacaattctttttgtttgtttgtttgggtttttt
gtttttgttttttgtttgtttgtttgtttgtttgtttcaagacagggttt
ctctgtatggccctggctgtcctggaactcactctgtagaccaggctggc
ctccaatttagaaatccacctgcctctgcctttccgggtgctgggattaa
aggcgtgcgccgccacgcccagctcagacattctttttatcctgttagaa
ttggctttctgtttcatcagaaactctgagaatatcgttattgttttatc
acttc
gaattcagccgggacatagttcagtgatggctatatgactcaggaggtca
tgggtggtcatgaagggcagaagaaacccaggtgagccgtgctggctggg
gaagatttcctaggaagaaagatattgagatacctagaaatcacaggtga
tatttggagaggtcaaagcctaggctggccttgaactcatggcaagcctc
tgcttcagcttcccaagttctggtatgagaggcgtgagccagcacacttg
gctcgtagggttatgaatacacatttttctatccaatatctccacatgat
ttcaatacaccagacatgagggagagggaagagttagagaaacagatttt
cttgtttagtttagttgatgaaaaagcttagttgatgaaaaaggacatac
atcaactatttaattttaatactaatgaactattcaattaataccttaag
ctatgtttcatcacagacacttcaaagtactgtagaatccaagacatcag
tttgaggtgcacagtggatcagtttccttaaggagggagggggagcttgg
gatacatcatggaggctgaaggtggtgatagaggctgtgacatttgtaac
caaagaggatgtggaaagagcttgttgatcacagtttaccaagtcagtgg
gggcattcagttgtacccagttggagagggaggggaaggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_36431877_36432430
seq2: B6Ng01-164K22.b_445_997 (reverse)

seq1  GAAGTGATAAAACATTAACAATATTTCTTCAGAGTTTCTGGATG-AACAG  49
      |||||||||||||| |||| |||||   ||||||||||| |||| |||||
seq2  GAAGTGATAAAACAATAACGATATT--CTCAGAGTTTCT-GATGAAACAG  47

seq1  AAAGCCAATTCTAACAGGGATAAAAGAATTGTCTGGGCTGGGCGTGGCGG  99
      |||||||||||||||| ||||||||  | |||||| ||||||||||||||
seq2  AAAGCCAATTCTAACA-GGATAAAAAGAATGTCTGAGCTGGGCGTGGCGG  96

seq1  CGCACGCCTTTAATCCCAGCACCCGG-GAGGCAGAGGCAGGTGGATTTCT  148
      ||||||||||||||||||||||||||  ||||||||||||||||||||||
seq2  CGCACGCCTTTAATCCCAGCACCCGGAAAGGCAGAGGCAGGTGGATTTCT  146

seq1  AAATTGGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGC  196

seq1  CATACAGAGAAACCCTGTCTTGAAACAAACAAACAAACAAACAAACAAAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAGAGAAACCCTGTCTTGAAACAAACAAACAAACAAACAAACAAAA  246

seq1  AAC-AAAACAAAAAACCCAAACAAACAAACAAAAAGAATTGTCTAACATG  297
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAACAAAAAACCCAAACAAACAAACAAAAAGAATTGTCTAACATG  296

seq1  GAAACTAGAAACTAACCTGTTTGTAATTTTTTTAATTTTGCTTATGTTTA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTAGAAACTAACCTGTTTGTAATTTTTTTAATTTTGCTTATGTTTA  346

seq1  AAAATGCCATACATGTACAAAACATATTTTCGTCATATCCATCTCCATTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCCATACATGTACAAAACATATTTTCGTCATATCCATCTCCATTC  396

seq1  CCCAAAACTTTTTTACAGATAATTCAATCCTCCTTCTAATTTCATGTCTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAACTTTTTTACAGATAATTCAATCCTCCTTCTAATTTCATGTCTT  446

seq1  CTTTTTTCTAATAACCCGCAGAGTCCAGTAGGTACTGCCCATATATACAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTCTAATAACCCGCAGAGTCCAGTAGGTACTGCCCATATATACAG  496

seq1  TGTAGAACCATCCCCTGGAGCATGAGTCACACCCTTGAAGTTGGCTACAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAACCATCCCCTGGAGCATGAGTCACACCCTTGAAGTTGGCTACAG  546

seq1  CTGTTCA  554
      |||||||
seq2  CTGTTCA  553

seq1: chr8_36293652_36294344
seq2: B6Ng01-164K22.g_70_762

seq1  GAATTCAGCCGGGACATAGTTCAGTGATGGCTATATGACTCAGGAGGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCGGGACATAGTTCAGTGATGGCTATATGACTCAGGAGGTCA  50

seq1  TGGGTGGTCATGAAGGGCAGAAGAAACCCAGGTGAGCCGTGCTGGCTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGTCATGAAGGGCAGAAGAAACCCAGGTGAGCCGTGCTGGCTGGG  100

seq1  GAAGATTTCCTAGGAAGAAAGATATTGAGATACCTAGAAATCACAGGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATTTCCTAGGAAGAAAGATATTGAGATACCTAGAAATCACAGGTGA  150

seq1  TATTTGGAGAGGTCAAAGCCTAGGCTGGCCTTGAACTCATGGCAAGCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGAGAGGTCAAAGCCTAGGCTGGCCTTGAACTCATGGCAAGCCTC  200

seq1  TGCTTCAGCTTCCCAAGTTCTGGTATGAGAGGCGTGAGCCAGCACACTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCAGCTTCCCAAGTTCTGGTATGAGAGGCGTGAGCCAGCACACTTG  250

seq1  GCTCGTAGGGTTATGAATACACATTTTTCTATCCAATATCTCCACATGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGTAGGGTTATGAATACACATTTTTCTATCCAATATCTCCACATGAT  300

seq1  TTCAATACACCAGACATGAGGGAGAGGGAAGAGTTAGAGAAACAGATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATACACCAGACATGAGGGAGAGGGAAGAGTTAGAGAAACAGATTTT  350

seq1  CTTGTTTAGTTTAGTTGATGAAAAAGCTTAGTTGATGAAAAAGGACATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTAGTTTAGTTGATGAAAAAGCTTAGTTGATGAAAAAGGACATAC  400

seq1  ATCAACTATTTAATTTTAATACTAATGAACTATTCAATTAATACCTTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACTATTTAATTTTAATACTAATGAACTATTCAATTAATACCTTAAG  450

seq1  CTATGTTTCATCACAGACACTTCAAAGTACTGTAGAATCCAAGACATCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTTTCATCACAGACACTTCAAAGTACTGTAGAATCCAAGACATCAG  500

seq1  TTTGAGGTGCACAGTGGATCAGTTTCCTTAAGGAGGGAGGGGGAGCTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGTGCACAGTGGATCAGTTTCCTTAAGGAGGGAGGGGGAGCTTGG  550

seq1  GATACATCATGGAGGCTGAAGGTGGTGATAGAGGCTGTGACATTTGTAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACATCATGGAGGCTGAAGGTGGTGATAGAGGCTGTGACATTTGTAAC  600

seq1  CAAAGAGGATGTGGAAAGAGCTTGTTGATCACAGTTTACCAAGTCAGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGGATGTGGAAAGAGCTTGTTGATCACAGTTTACCAAGTCAGTGG  650

seq1  GGGCATTCAGTTGTACCCAGTTGGAGAGGGAGGGGAAGGAGGA  693
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATTCAGTTGTACCCAGTTGGAGAGGGAGGGGAAGGAGGA  693