BAC Information

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BAC

Clone NameB6Ng01-165D10
Chromosome8 (Build37)
Map Location 109,671,459 - 109,812,545
singlet/doubletdoublet
Overlap geneCyb5b, LOC100042791
Upstream geneLypla3, Slc7a6, Slc7a6os, Prmt7, Smpd3, Zfp90, 6030452D12Rik, Cdh3, LOC100042734, Cdh1, Tmco7, Has3, 5830457O10Rik, Cirh1a, EG234703, Sntb2, Vps4a, Cog8, Nip7, Tmed6, Terf2, EG667847
Downstream geneNfat5, Nqo1, Nob1, Wwp2, LOC100042812, Psmd7, LOC100041744, LOC668038
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165D10.bB6Ng01-165D10.g
ACCDH957333DH957334
length1,0471,106
definitionDH957333|Mus musculus domesticus DNA, BAC clone: B6Ng01-165D10, 5' end.DH957334|Mus musculus domesticus DNA, BAC clone: B6Ng01-165D10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(109,811,981 - 109,812,545)(109,671,459 - 109,672,573)
sequence
gaattcttccaagtcagttgagatctgatgccttaccagtcaagtctctc
gagattctgcagggttgtccagccttttgacactgaatcataaggttgtc
acctacaacattgaggtttaggggtagggaatagaggcctccatgaggga
aatgtttccagtagcaagcatgagggcttgagcttagatccttaacaccc
caggttgaagactgaacaccatgcatgagtaacccaagtgctgagtggca
gacacagaaagatctgcagaatgcactggccaaccggtgtagcaaagagg
gtgagcactaacatcactgagagaccctatctcaaaaataataaataaat
aagggggaggggcaacagaagaatccaaaatgctaatctctggccagcac
acacacattggtgtgcaagtgtatccaaaagcaaatgaaaacaaacagag
gtaccagacacacataaaagtaataacaaaataaaatttgctagatgtgg
tgccacaagcctttattcccagcatttaggaggcagaggcaggacacttc
tccatgagttcaaaggctagcctggtctgcatagggagtcttagctctgc
caaggctgcacagtgagaccctgtctcaaaataaataaaaaatagtgatg
attctaaaaagtctatacttgagacctgtgtagtttagttccaaaaaaaa
aaaaaaaagggccaaaaataattataatgttttgagtcattttatgactt
tatgttgggtcatattcggggctatctttgttcacattgcccggtggcct
tgcctagtagagacagagtctggagatccaatttaatcacttgaatctaa
aagacaagtgaacaatgggaaggacaaagttagtgctcaagcaatacaaa
ggatggattgctgaggaagccgctgcagtgagaaagtagaaactctggga
ccattaaaccaggaaaggaaagaatgtctttaaatcctcccaactcaggt
agtcaacatatgcaaactgcagcaattccgtattccagcagcttttc
gaattctgcctcctgatcttccgggatgtgagcaagctctaactgaagat
tttagcaggcactgtactgagaattttaatggccagtctgctgctgtggc
tcctctaaatacttttcaaagagcttgaaaaaaaaaaattaaagcagcca
gggaaagaaaactatagatttttcatgaatacatggatacagagactctg
tggaacattaacaggactcaagaaggctgagccagtaaaggctcttgcac
ccagaatgggtgacctgaatttgatccctcagatttacagggtagatgga
gagaatcgattcctgcaggttgtcctcaaaactaaatactatatatatat
tgagagtcacttgttctgacgtccctttcaggctgttcacttatcaagta
tgttttccctgcttttgaccgtaatctctagaaattaaattacatacgca
cacacatgtacatgcacattcacatgtatacacacagaggcggggccaca
cgtagtgtgtgcctgtttatgagtctatctttttatttcttttggaggag
aactggtttctttggattttttttcctttgttttgagcccaacaacaaca
acaacaacaacaacaacacacacacacacacacacattaggggccagaga
aatggctcagcttataaaaatgctaaagcttgatgctttgagtttgatct
tttggattttacatggtagaaggagagaactgaccactacaggttctcct
ctgacctctatagggacccctccccacccccataagcaagtcaatgtctt
tttttttaattaggtattttcctcatttacatttttcaatgctatcccaa
aggtcccccatacccccccaatcccctacccacccactccccctttttgg
cctggcattcccatgaactggggcataaaagtttgcaagtccatgggctt
ctctttgcagtgatgtccgactaggccatcttttgatacatatgcagcta
tgacaaagctcccgggtactgggtagttcatattgtgttccactataggg
tttgagttcccttaagccccttgggtactttccatgctctcccattaggc
cgtaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_109811981_109812545
seq2: B6Ng01-165D10.b_45_609 (reverse)

seq1  CTTTGAACTCATGGAGAAGTGTCCTGCCTCTGCCTCCTAAATGCTGGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAACTCATGGAGAAGTGTCCTGCCTCTGCCTCCTAAATGCTGGGAA  50

seq1  TAAAGGCTTGTGGCACCACATCTAGCAAATTTTATTTTGTTATTACTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGCTTGTGGCACCACATCTAGCAAATTTTATTTTGTTATTACTTTT  100

seq1  ATGTGTGTCTGGTACCTCTGTTTGTTTTCATTTGCTTTTGGATACACTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGTCTGGTACCTCTGTTTGTTTTCATTTGCTTTTGGATACACTTG  150

seq1  CACACCAATGTGTGTGTGCTGGCCAGAGATTAGCATTTTGGATTCTTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCAATGTGTGTGTGCTGGCCAGAGATTAGCATTTTGGATTCTTCTG  200

seq1  TTGCCCCTCCCCCTTATTTATTTATTATTTTTGAGATAGGGTCTCTCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCCTCCCCCTTATTTATTTATTATTTTTGAGATAGGGTCTCTCAGT  250

seq1  GATGTTAGTGCTCACCCTCTTTGCTACACCGGTTGGCCAGTGCATTCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTAGTGCTCACCCTCTTTGCTACACCGGTTGGCCAGTGCATTCTGC  300

seq1  AGATCTTTCTGTGTCTGCCACTCAGCACTTGGGTTACTCATGCATGGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTTTCTGTGTCTGCCACTCAGCACTTGGGTTACTCATGCATGGTGT  350

seq1  TCAGTCTTCAACCTGGGGTGTTAAGGATCTAAGCTCAAGCCCTCATGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTTCAACCTGGGGTGTTAAGGATCTAAGCTCAAGCCCTCATGCTT  400

seq1  GCTACTGGAAACATTTCCCTCATGGAGGCCTCTATTCCCTACCCCTAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTGGAAACATTTCCCTCATGGAGGCCTCTATTCCCTACCCCTAAAC  450

seq1  CTCAATGTTGTAGGTGACAACCTTATGATTCAGTGTCAAAAGGCTGGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATGTTGTAGGTGACAACCTTATGATTCAGTGTCAAAAGGCTGGACA  500

seq1  ACCCTGCAGAATCTCGAGAGACTTGACTGGTAAGGCATCAGATCTCAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGCAGAATCTCGAGAGACTTGACTGGTAAGGCATCAGATCTCAACT  550

seq1  GACTTGGAAGAATTC  565
      |||||||||||||||
seq2  GACTTGGAAGAATTC  565

seq1: chr8_109671459_109672573
seq2: B6Ng01-165D10.g_68_1173

seq1  GAATTCTGCCTCCTGATCTTCCGGGATGTGAGCAAGCTCTAACTGAAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCCTCCTGATCTTCCGGGATGTGAGCAAGCTCTAACTGAAGAT  50

seq1  TTTAGCAGGCACTGTACTGAGAATTTTAATGGCCAGTCTGCTGCTGTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCAGGCACTGTACTGAGAATTTTAATGGCCAGTCTGCTGCTGTGGC  100

seq1  TCCTCTAAATACTTTTCAAAGAGCTTGAAAAAAAAAAATTAAAGCAGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTAAATACTTTTCAAAGAGCTTGAAAAAAAAAAATTAAAGCAGCCA  150

seq1  GGGAAAGAAAACTATAGATTTTTCATGAATACATGGATACAGAGACTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGAAAACTATAGATTTTTCATGAATACATGGATACAGAGACTCTG  200

seq1  TGGAACATTAACAGGACTCAAGAAGGCTGAGCCAGTAAAGGCTCTTGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACATTAACAGGACTCAAGAAGGCTGAGCCAGTAAAGGCTCTTGCAC  250

seq1  CCAGAATGGGTGACCTGAATTTGATCCCTCAGATTTACAGGGTAGATGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAATGGGTGACCTGAATTTGATCCCTCAGATTTACAGGGTAGATGGA  300

seq1  GAGAATCGATTCCTGCAGGTTGTCCTCAAAACTAAATACTATATATATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATCGATTCCTGCAGGTTGTCCTCAAAACTAAATACTATATATATAT  350

seq1  TGAGAGTCACTTGTTCTGACGTCCCTTTCAGGCTGTTCACTTATCAAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTCACTTGTTCTGACGTCCCTTTCAGGCTGTTCACTTATCAAGTA  400

seq1  TGTTTTCCCTGCTTTTGACCGTAATCTCTAGAAATTAAATTACATACGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCCCTGCTTTTGACCGTAATCTCTAGAAATTAAATTACATACGCA  450

seq1  CACACATGTACATGCACATTCACATGTATACACACAGAGGCGGGGCCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATGTACATGCACATTCACATGTATACACACAGAGGCGGGGCCACA  500

seq1  CGTAGTGTGTGCCTGTTTATGAGTCTATCTTTTTATTTCTTTTGGAGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGTGTGTGCCTGTTTATGAGTCTATCTTTTTATTTCTTTTGGAGGAG  550

seq1  AACTGGTTTCTTTGGATTTTTTTTCCTTTGTTTTGAGCCCAACAACAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGTTTCTTTGGATTTTTTTTCCTTTGTTTTGAGCCCAACAACAACA  600

seq1  ACAACAACAACAACAACACACACACACACACACACATTAGGGGCCAGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAACAACAACAACACACACACACACACACACATTAGGGGCCAGAGA  650

seq1  AATGGCTCAGCTTATAAAAATGCTAAAGCTTGATGCTTTGAGTTTGATC-  699
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AATGGCTCAGCTTATAAAAATGCTAAAGCTTGATGCTTTGAGTTTGATCT  700

seq1  TTTGGATTTTACATGGTAGAAGGAGAGAACTGACCACTACAGGTTCTCCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGATTTTACATGGTAGAAGGAGAGAACTGACCACTACAGGTTCTCCT  750

seq1  CTGACCTCTATAGGGACCCCTCCCCACCCCCATAAGCAAGTCAATGTACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTGACCTCTATAGGGACCCCTCCCCACCCCCATAAGCAAGTCAATGT-CT  799

seq1  TTTTTTTTAATTAGGTATTTTCCTCATTTACA-TTTTCAATGCTATCCCA  848
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTTTTTTAATTAGGTATTTTCCTCATTTACATTTTTCAATGCTATCCCA  849

seq1  AAGGTCCCCCATACCCCCCCAATCCCCTACCCACCCACTCCCCCTTTTTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCCCCCATACCCCCCCAATCCCCTACCCACCCACTCCCCCTTTTTG  899

seq1  GCCCTGGCATTCCCATGTACTGGGGCATATAAAGTTTGCAAGTCCAATGG  948
      | ||||||||||||||| ||||||||||| ||||||||||||||| ||||
seq2  G-CCTGGCATTCCCATGAACTGGGGCATA-AAAGTTTGCAAGTCC-ATGG  946

seq1  GCCTCTCTTTGCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCA  998
      || |||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GCTTCTCTTTGCAGTGATGTCCGACTAGGCCATCTTTTGATACATATGCA  996

seq1  GCTAAAGACAAGAGCTCCCGGGTACTGGTTAGTTCATATTGTTGTTCCAC  1048
      ||| | ||||| |||||||||||||||| |||||||||||| ||||||| 
seq2  GCT-ATGACAA-AGCTCCCGGGTACTGGGTAGTTCATATTG-TGTTCCA-  1042

seq1  CTATAGGGTTGCAGTTCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCT  1098
      ||||||||||  ||||||||| ||| |||||||||||||| |  ||||  
seq2  CTATAGGGTTTGAGTTCCCTTAAGCCCCTTGGGTACTTTC-CATGCTCTC  1091

seq1  CCATTAGGGGCCGTAAA  1115
      ||||||  |||||||||
seq2  CCATTA--GGCCGTAAA  1106