BAC Information

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BAC

Clone NameB6Ng01-166O10
Chromosome8 (Build37)
Map Location 7,842,211 - 8,040,119
singlet/doubletdoublet
Overlap genenone
Upstream geneEG665127, EG546032
Downstream geneLOC100039836, Efnb2, 9430010O03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166O10.bB6Ng01-166O10.g
ACCDH958544DH958545
length9961,022
definitionDH958544|Mus musculus domesticus DNA, BAC clone: B6Ng01-166O10, 5' end.DH958545|Mus musculus domesticus DNA, BAC clone: B6Ng01-166O10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,039,426 - 8,040,119)(7,842,211 - 7,843,236)
sequence
gaattcaattcccagcaaccacatggtggctcacaaccatccgtaatgag
atctgacgccctcttctggtgcatctgaagacagctgcaattattagata
taataataataataataataataataataataataatatcttaaaaaatg
gggtgactaaaatgttaatatgtgataaatgccagggaactgagcacaaa
tacacatggtatctaaaataagaacttttaaaaattcattcgtttattca
ctttatatctcagtcacagcccctatttccctcacacagcctctccgtac
ctccccttctcctctgagaaggggaaggccccatctgggtatcacccgac
cctagcacatcaagtcactgtagaactaggcacattctctcctggtcaga
ctagacaatgcagcccagttaggagaacaggatccataggcaagcatcag
ttagagacagaccccattccagttgttggggaatctgtatgaagaccaag
ttgcacatctgctataaatgtgtactggtctaggtctagcccatgcatgt
tctctggttggtggtttagactctgtgagcccccatgacccaggttagtt
gactctgctggtcttcctgtagagaccctatccctttcaggggcctgcaa
tccttcccccaactcttccacaagataccatgagctccatgtaaaggtct
ctgcatctgttttcattagctgctgagtggagctctcagaagactgttat
gctagactcctgtcttcaagcataacagaatatcattaatagtgtcatgg
attggttcttgttaacaagatgggtctcactttgtgacagttattggttg
gccagactctccatttctgcattgtctttgttcctatacatcttataggc
agaatacattttgggtacaagttttgtgggtgggttggtgtccttatcca
tttctgtactgaaacaatcagatgaggtagttacccatagcagagt

gaattcagcatcttttgccaaataaatgaacattaaaaagaaatcatata
atgttggcagtgtcaggagaagaatgttatcaaaaagtatttcatcttca
tgactttccttttgtcctctaaaatattcatttcagtaaagacatgtggg
cagctgagaagaggcatgggtgctttgtcctcttttaagtataatgaaat
gtatcatgacctaggaatttgaagtggttgacaaatctgcatctattttt
agcagatctggaagcaatgtatatctaaggtgatagcagacacgaacaca
gacactgagctcaacacctttccatgggtctgttaggaacttacccaaca
aatccacagtggatcatcttcggtattttgagtatcttttttgtcatttt
taatgaattggtaggagaatgggggctatattagatttttttgtcttttt
ttttttacatagtttttaaaatcagtcaataaaatttcaggatatctttt
gtcattctttgcttctactatgattaagcactgtactggctagttttgtg
tcaacttgacacagctggagttatcacagagaaaggagcttcagttgagg
aaatgcctccatgagatccaactgtaaggcattttcacaattagagatca
agggggaaaggccccttgtgagtgggaccatctctggactgatagtattg
gttctataagagagcagggaagcaagccagtaaggaacatccctccatgg
cctctgcattaacccctgcttcctgacctgcttgagttccagtcctgaat
tccttggtgatgaacagcagtatggaagtgtaagctgaataaaccctttc
ctccaacttgcttcttggtcatgatgtttgtgcgggaatagaaaccctga
ctagacaagcaccatgagtttctctctgtgaattaaagtacaaacttaca
gggaaatttttattgtcatttagtagcctatacattgatatcatggatat
ctgaatcttcatgggttgatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_8039426_8040119
seq2: B6Ng01-166O10.b_49_742 (reverse)

seq1  TTACATGGAGCTCATGGTATCTTGTGGAAGAGTTGGGGGAAGGATTGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGGAGCTCATGGTATCTTGTGGAAGAGTTGGGGGAAGGATTGCAG  50

seq1  GCCCCTGAAAGGGATAGGGTCTCTACAGGAAGACCAGCAGAGTCAACTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTGAAAGGGATAGGGTCTCTACAGGAAGACCAGCAGAGTCAACTAA  100

seq1  CCTGGGTCATGGGGGCTCACAGAGTCTAAACCACCAACCAGAGAACATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGTCATGGGGGCTCACAGAGTCTAAACCACCAACCAGAGAACATGC  150

seq1  ATGGGCTAGACCTAGACCAGTACACATTTATAGCAGATGTGCAACTTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTAGACCTAGACCAGTACACATTTATAGCAGATGTGCAACTTGGT  200

seq1  CTTCATACAGATTCCCCAACAACTGGAATGGGGTCTGTCTCTAACTGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATACAGATTCCCCAACAACTGGAATGGGGTCTGTCTCTAACTGATG  250

seq1  CTTGCCTATGGATCCTGTTCTCCTAACTGGGCTGCATTGTCTAGTCTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTATGGATCCTGTTCTCCTAACTGGGCTGCATTGTCTAGTCTGAC  300

seq1  CAGGAGAGAATGTGCCTAGTTCTACAGTGACTTGATGTGCTAGGGTCGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAGAATGTGCCTAGTTCTACAGTGACTTGATGTGCTAGGGTCGGG  350

seq1  TGATACCCAGATGGGGCCTTCCCCTTCTCAGAGGAGAAGGGGAGGTACGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACCCAGATGGGGCCTTCCCCTTCTCAGAGGAGAAGGGGAGGTACGG  400

seq1  AGAGGCTGTGTGAGGGAAATAGGGGCTGTGACTGAGATATAAAGTGAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCTGTGTGAGGGAAATAGGGGCTGTGACTGAGATATAAAGTGAATA  450

seq1  AACGAATGAATTTTTAAAAGTTCTTATTTTAGATACCATGTGTATTTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGAATGAATTTTTAAAAGTTCTTATTTTAGATACCATGTGTATTTGTG  500

seq1  CTCAGTTCCCTGGCATTTATCACATATTAACATTTTAGTCACCCCATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTTCCCTGGCATTTATCACATATTAACATTTTAGTCACCCCATTTT  550

seq1  TTAAGATATTATTATTATTATTATTATTATTATTATTATTATTATATCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGATATTATTATTATTATTATTATTATTATTATTATTATTATATCTA  600

seq1  ATAATTGCAGCTGTCTTCAGATGCACCAGAAGAGGGCGTCAGATCTCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTGCAGCTGTCTTCAGATGCACCAGAAGAGGGCGTCAGATCTCATT  650

seq1  ACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAATTC  694
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAATTC  694


seq1: chr8_7842211_7843236
seq2: B6Ng01-166O10.g_68_1089

seq1  GAATTCAGCATCTTTTGCCAAATAAATGAACATTAAAAAGAAATCATATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATCTTTTGCCAAATAAATGAACATTAAAAAGAAATCATATA  50

seq1  ATGTTGGCAGTGTCAGGAGAAGAATGTTATCAAAAAGTATTTCATCTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGGCAGTGTCAGGAGAAGAATGTTATCAAAAAGTATTTCATCTTCA  100

seq1  TGACTTTCCTTTTGTCCTCTAAAATATTCATTTCAGTAAAGACATGTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTCCTTTTGTCCTCTAAAATATTCATTTCAGTAAAGACATGTGGG  150

seq1  CAGCTGAGAAGAGGCATGGGTGCTTTGTCCTCTTTTAAGTATAATGAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGAGAAGAGGCATGGGTGCTTTGTCCTCTTTTAAGTATAATGAAAT  200

seq1  GTATCATGACCTAGGAATTTGAAGTGGTTGACAAATCTGCATCTATTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCATGACCTAGGAATTTGAAGTGGTTGACAAATCTGCATCTATTTTT  250

seq1  AGCAGATCTGGAAGCAATGTATATCTAAGGTGATAGCAGACACGAACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGATCTGGAAGCAATGTATATCTAAGGTGATAGCAGACACGAACACA  300

seq1  GACACTGAGCTCAACACCTTTCCATGGGTCTGTTAGGAACTTACCCAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGAGCTCAACACCTTTCCATGGGTCTGTTAGGAACTTACCCAACA  350

seq1  AATCCACAGTGGATCATCTTCGGTATTTTGAGTATCTTTTTTGTCATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCACAGTGGATCATCTTCGGTATTTTGAGTATCTTTTTTGTCATTTT  400

seq1  TAATGAATTGGTAGGAGAATGGGGGCTATATTAGATTTTTTTGTCTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAATTGGTAGGAGAATGGGGGCTATATTAGATTTTTTTGTCTTTTT  450

seq1  TTTTTTACATAGTTTTTAAAATCAGTCAATAAAATTTCAGGATATCTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTACATAGTTTTTAAAATCAGTCAATAAAATTTCAGGATATCTTTT  500

seq1  GTCATTCTTTGCTTCTACTATGATTAAGCACTGTACTGGCTAGTTTTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTCTTTGCTTCTACTATGATTAAGCACTGTACTGGCTAGTTTTGTG  550

seq1  TCAACTTGACACAGCTGGAGTTATCACAGAGAAAGGAGCTTCAGTTGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTTGACACAGCTGGAGTTATCACAGAGAAAGGAGCTTCAGTTGAGG  600

seq1  AAATGCCTCCATGAGATCCAACTGTAAGGCATTTTCACAATTAGAGATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCTCCATGAGATCCAACTGTAAGGCATTTTCACAATTAGAGATCA  650

seq1  AGGGGGAAAGGCCCCTTGTGAGTGGGACCATCTCTGGACTGATAGTATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGAAAGGCCCCTTGTGAGTGGGACCATCTCTGGACTGATAGTATTG  700

seq1  GTTCTATAAGAGAGCAGGGAAGCAAGCCAGTAAGGAACATCCCTCCATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATAAGAGAGCAGGGAAGCAAGCCAGTAAGGAACATCCCTCCATGG  750

seq1  CCTCTGCATTAACCCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCATTAACCCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGAAT  800

seq1  TCCTTGGTGATGAACAGCAGTATGGAAGTGTAAGCTGAATAAACCCTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGGTGATGAACAGCAGTATGGAAGTGTAAGCTGAATAAACCCTTTC  850

seq1  CTCCAACTTGCTTCTTGGTCATGATGTTTGTGCGGGAATAGAAACCCTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAACTTGCTTCTTGGTCATGATGTTTGTGCGGGAATAGAAACCCTGA  900

seq1  CTAAGACAAGCACCATGAGTTTCTCTCTGTGAATTAAAGTACAAACTTAC  950
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CT-AGACAAGCACCATGAGTTTCTCTCTGTGAATTAAAGTACAAACTTAC  949

seq1  AGGGAAATTTTTATTGTCATTTTAGTAGCCTATACATTGATATCATTGAT  1000
      ||||||||||||||||||| |||||||||||||||||||||||||| |||
seq2  AGGGAAATTTTTATTGTCA-TTTAGTAGCCTATACATTGATATCATGGAT  998

seq1  ATCTGAATCTTCATTGGTTTAGATGA  1026
      |||||||||||||| ||||  |||||
seq2  ATCTGAATCTTCATGGGTT--GATGA  1022


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