BAC Information

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BAC

Clone NameB6Ng01-167I08
Chromosome8 (Build37)
Map Location 7,276,561 - 7,380,851
singlet/doubletdoublet
Overlap genenone
Upstream geneEG665127, EG546032
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167I08.bB6Ng01-167I08.g
ACCDH958990DH958991
length1,176332
definitionDH958990|Mus musculus domesticus DNA, BAC clone: B6Ng01-167I08, 5' end.DH958991|Mus musculus domesticus DNA, BAC clone: B6Ng01-167I08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,276,561 - 7,277,691)(7,380,520 - 7,380,851)
sequence
gaattcaaatgactactacctatcttagatacttttctattggtgtgata
agataccataaccaagaaaacatataaaaaaaaacaataacttggaggtt
aaaatttaagagagtaagagtctatgaccatcatttcaaggagcctagca
gcaggtatgcaggcatggcacaggaacagcagctgggagcttacatgtaa
tccacaaccacaaggcagacaaagagagagcacattgggaatggggtggt
cttatgaaatctcaaagcccagctccaatagcatacctaccacaataagg
acacacttgctaaactttcaccgtttgaccaattgtaaacccagcattca
aatatagaagcatatactaggaccattctcattcaaaccaccacaacatc
accatataaaaagccaggtgcaaaaacatgattttgtaatcccagcactg
gggaggttaacacagattactaaacctcactaactaattaagttagccta
acttaattggttagcttcagattcagtgagagatactacctgaaatgaaa
acaaggccaaacaaagaaataaacaaaaaagaaaacaaaacaaaagtcaa
ccaattaattgaaaaggtgaagaacaactgaggacgacagtaataatctg
acctacatactcacacatgtacacatgcatgtgcacccacattcacatgt
gttttccctcataaacaaacacacacaaagtgacgtcactttaaaatgta
aggttattgacatgcttaatatttttattcagtttaaatttagttgtgca
ctcattttttaatgttggcttttgaaacaaagcctccaatatagagtcca
ccctatgtgaaactccgctgtgatttgccttggagaatttggtaccaatg
cttttacttactttcctgtttcagttaaagttagatattttttcttagta
attttattgccagatactctagaaaaacacagtaaaaatgtagcagctga
gttatatgcacttgctatcttcgagcctttgttcacaaagaaatttccca
gaaacaattacatagcattgcttttattgcagtcataaacacacacacaa
tcagtgtgtatagtgcatcaacaaagaactgccatttcgagctcttggcc
atgcaaaggaacaggtagttgacagt

tatgtaggtagtgctaattcaaaaattctgaaaagcccttctgacaacac
tggcattgtatagtcccttaacttcagtataaaaacagccaatatgcttg
ggagtgtttttctccccttgggttgccatgtccagccatgacatgaggaa
ttatgcacttttttattttctcttgttaggctatattcaatggataaccc
tgggaggcctggaggcctgctatgtgtgtttttgtttgtttgtttcactt
tttcttttttctttttttttctttacttttcttttcagaaactgaagaaa
ttgatctgagggagaggggatgtgggggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_7276561_7277691
seq2: B6Ng01-167I08.b_105_1220

seq1  ACCAAGAAAACATATAAAAAAAAACAATAACTTGGAGGTTAAAATTTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGAAAACATATAAAAAAAAACAATAACTTGGAGGTTAAAATTTAAG  50

seq1  AGAGTAAGAGTCTATGACCATCATTTCAAGGAGCCTAGCAGCAGGTATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAAGAGTCTATGACCATCATTTCAAGGAGCCTAGCAGCAGGTATGC  100

seq1  AGGCATGGCACAGGAACAGCAGCTGGGAGCTTACATGTAATCCACAACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGGCACAGGAACAGCAGCTGGGAGCTTACATGTAATCCACAACCA  150

seq1  CAAGGCAGACAAAGAGAGAGCACATTGGGAATGGGGTGGTCTTATGAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCAGACAAAGAGAGAGCACATTGGGAATGGGGTGGTCTTATGAAAT  200

seq1  CTCAAAGCCCAGCTCCAATAGCATACCTACCACAATAAGGACACACTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGCCCAGCTCCAATAGCATACCTACCACAATAAGGACACACTTGC  250

seq1  TAAACTTTCACCGTTTGACCAATTGTAAACCCAGCATTCAAATATAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTTCACCGTTTGACCAATTGTAAACCCAGCATTCAAATATAGAAG  300

seq1  CATATACTAGGACCATTCTCATTCAAACCACCACAACATCACCATATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACTAGGACCATTCTCATTCAAACCACCACAACATCACCATATAAA  350

seq1  AAGCCAGGTGCAAAAACATGATTTTGTAATCCCAGCACTGGGGAGGTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGGTGCAAAAACATGATTTTGTAATCCCAGCACTGGGGAGGTTAA  400

seq1  CACAGATTACTAAACCTCACTAACTAATTAAGTTAGCCTAACTTAATTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATTACTAAACCTCACTAACTAATTAAGTTAGCCTAACTTAATTGG  450

seq1  TTAGCTTCAGATTCAGTGAGAGATACTACCTGAAATGAAAACAAGGCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTTCAGATTCAGTGAGAGATACTACCTGAAATGAAAACAAGGCCAA  500

seq1  ACAAAGAAATAAACAAAAAAGAAAACAAAACAAAAGTCAACCAATTAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAAATAAACAAAAAAGAAAACAAAACAAAAGTCAACCAATTAATT  550

seq1  GAAAAGGTGAAGAACAACTGAGGACGACAGTAATAATCTGACCTACATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGTGAAGAACAACTGAGGACGACAGTAATAATCTGACCTACATAC  600

seq1  TCACACATGTACACATGCATGTGCACCCACATTCACATGTGTTTTCCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACATGTACACATGCATGTGCACCCACATTCACATGTGTTTTCCCTC  650

seq1  ATAAACAAACACACACAAAGTGACGTCACTTTAAAATGTAAGGTTATTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAAACACACACAAAGTGACGTCACTTTAAAATGTAAGGTTATTGA  700

seq1  CATGCTTAATATTTTTATTCAGTTTAAATTTAGTTGTGCACTCATTTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTAATATTTTTATTCAGTTTAAATTTAGTTGTGCACTCATTTTTT  750

seq1  AATGTTGGCTTTTGAAACAAAGCCTCCAATATAGAGTCCACCCTATGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGGCTTTTGAAACAAAGCCTCCAATATAGAGTCCACCCTATGTGA  800

seq1  AACTCCGCTGTGATTTGCCTTGGAGAATTTGGTACCAATGCTTTTACTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCGCTGTGATTTGCCTTGGAGAATTTGGTACCAATGCTTTTACTTA  850

seq1  CTTTCCTGTTTCAGTTAAAGTTAGATATTTTTTCTTAGTAATTTTATTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTGTTTCAGTTAAAGTTAGATATTTTTTCTTAGTAATTTTATTGC  900

seq1  CAGATAACTCTAGAAAAACACAGTAAAAATGTAGCAGCTGAGTTATATGC  950
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAT-ACTCTAGAAAAACACAGTAAAAATGTAGCAGCTGAGTTATATGC  949

seq1  ACTTGCCTATCCTTCGAGCCCTATGTTCACAAAGAAATTCCCAAGAAACA  1000
      ||||| |||| ||||||| ||| |||||||||||||||| || |||||||
seq2  ACTTG-CTAT-CTTCGAG-CCTTTGTTCACAAAGAAATTTCCCAGAAACA  996

seq1  ATTACATAGCCATTGCTTTTATTGCAGTCATAAACACACACACAAACCAG  1050
      ||||||||| ||||||||||||||||||||||||||||||||| || |||
seq2  ATTACATAG-CATTGCTTTTATTGCAGTCATAAACACACACAC-AATCAG  1044

seq1  TGTGTATAGGTGCATCCAACAAAGACGTGCATTTTCAGAGCTCTTTGGAG  1100
      |||||||| |||||| |||||||||  |||  |||| ||||||||    |
seq2  TGTGTATA-GTGCAT-CAACAAAGAACTGCCATTTC-GAGCTCTT---GG  1088

seq1  CAATGCAAAAAGGAGCAGGTAGTTGAGCAGT  1131
      | ||||  |||||| ||||||||||| ||||
seq2  CCATGC--AAAGGAACAGGTAGTTGA-CAGT  1116


seq1: chr8_7380520_7380851
seq2: B6Ng01-167I08.g_74_405 (reverse)

seq1  TCCTCCCCCACATCCCCTCTCCCTCAGATCAATTTCTTCAGTTTCTGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCCCACATCCCCTCTCCCTCAGATCAATTTCTTCAGTTTCTGAAA  50

seq1  AGAAAAGTAAAGAAAAAAAAAGAAAAAAGAAAAAGTGAAACAAACAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGTAAAGAAAAAAAAAGAAAAAAGAAAAAGTGAAACAAACAAACA  100

seq1  AAAACACACATAGCAGGCCTCCAGGCCTCCCAGGGTTATCCATTGAATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACACATAGCAGGCCTCCAGGCCTCCCAGGGTTATCCATTGAATAT  150

seq1  AGCCTAACAAGAGAAAATAAAAAAGTGCATAATTCCTCATGTCATGGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAACAAGAGAAAATAAAAAAGTGCATAATTCCTCATGTCATGGCTG  200

seq1  GACATGGCAACCCAAGGGGAGAAAAACACTCCCAAGCATATTGGCTGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGGCAACCCAAGGGGAGAAAAACACTCCCAAGCATATTGGCTGTTT  250

seq1  TTATACTGAAGTTAAGGGACTATACAATGCCAGTGTTGTCAGAAGGGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACTGAAGTTAAGGGACTATACAATGCCAGTGTTGTCAGAAGGGCTT  300

seq1  TTCAGAATTTTTGAATTAGCACTACCTACATA  332
      ||||||||||||||||||||||||||||||||
seq2  TTCAGAATTTTTGAATTAGCACTACCTACATA  332


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