BAC Information

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BAC

Clone NameB6Ng01-169D22
Chromosome8 (Build37)
Map Location 6,089,513 - 6,237,609
singlet/doubletdoublet
Overlap genenone
Upstream geneSlc10a2, LOC434275, LOC623409, LOC669429, LOC100040360
Downstream geneEG665127, EG546032
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169D22.bB6Ng01-169D22.g
ACCDH960275DH960276
length1,1581,134
definitionDH960275|Mus musculus domesticus DNA, BAC clone: B6Ng01-169D22, 5' end.DH960276|Mus musculus domesticus DNA, BAC clone: B6Ng01-169D22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,236,447 - 6,237,609)(6,089,513 - 6,090,660)
sequence
gaattcatccaccaatcatatctgctttcccttctgcatcctacctggta
taaacttgaagttcaaccatttttctgctggtagcagtgcttatctctgt
taatcttcactgtttaattttttgttatttgttattttattttggttttt
gttttgttttgagagctttgttttgtttttgttgttatttttgtagtagt
tgttgttgtcttttctcttttttctgttattgctacttggtttaactttc
tgcttgccaaattatctgacttatacagttgttttaaaatagcaatattg
actaagtttgagattggtttattttaaaatgtcaatcatggatttaaaaa
cctacatttctagtctatgtttgtacacaggaatcttaattttgcttagt
ttcaatgggaaagcatatggggggggggctaaatcttgctgtctgctcta
attacatacttttttatcaaagagaagctaatttcaggcctctctaattg
tttttcccttcatccctcactccttccctctctccctctagtatcttcct
ccctcccttgttccctttctttccagttttgatgatcaaacccagggact
tatgcataggccttatacatgccagacaagtattttgtgaaatcaaatac
atccataagcctgtaatgtatagattttaaagtttaaatgtattaggctt
ctgtgaaaagtatatatgctctaatattttgaatgcattcttaacaaatt
acaagtatttgggggctttggaagtaatttctttttctgtttagcactat
agatttctctttcttactcttgaactattcacgtaatcaagtatgaaata
aacaatgtgttgcctttcagtattattaattctctgaaacttatttaaaa
aaataaccaccaaattatttgtatcatttcattcaaaggagcattttaac
aagtaggaaataccaactgatttacttttcagagtcatagggctttgttt
attttatcaaagagaagaaaattaacaattgaatattgattctgcagcga
gatttaaacctcgaatgcattttacttaattgatatgaacaatggagata
ataaagctgccacggtgctattgacttatgagcatgcctggggaggcact
gagggcaa

gaattcacaaaaatatgctacaaaatacttatattaaatatgaagaaaga
ttaatctctgaattctttcaattagtcatacatcaatctataaatagcac
agacactagaagctttacacatggcaatacattttaaaattaatcttaag
tatggtagctgcgattgatacacattgacttcactcattgtttaccatgt
gacaaagactacttgggacatatttgtaatactacaagttaggccatact
aattttctaggggaaagaaattatgtcttactttgttgtaacatcaggac
atttgagtaagtaaaagcaagtatttggtagaactaagacctgtgtacat
tgttcctgggaaatatgtaggatgcgggggcttctagtttgattcttcct
agatgttatggaaatttagcaattgtgtacattttatgttttaactagac
tggatattaaatgagggagggaactgtccttgttgaaagagcagaaatca
agttatgtgaatgccattctgtcatagatgatatcaaagggatttttttt
tttgttgttcttgccctgttccaagtaagcatgaatcatggacgtatttg
aatgttatttgtattcagtttgggaataacacattctggctaccagcagt
gctgttattaattctctcttcaatgattaagcaagctgtttacactggtg
ccagcttgcctattcatcttggatcagtatgatatgggcagcagaaacat
gtgctagttttaacaatacgtttgaaggcttcggtgatgcttgctccttc
tctcctctcttagctgtgctcattttgatttggaagttggaggcttctct
tgcaggctgcgtattagcataaggcaatgaaaagcataagcaggacccaa
tatgaaggcatatcatatatacatgagaccatgattacactagttggaag
cttataaaaaagagcattcaattccatgacattagtgagccatcatgaaa
tttttgaccaataagttaaacatatagttaaaaatattttatctaactta
tctatttttgcaaattatctattatatttcctctattatcctcagaataa
ttacaattcatctgggaattattatttctcactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_6236447_6237609
seq2: B6Ng01-169D22.b_40_1197 (reverse)

seq1  TTGCCCTCAGTGCCTCCACAGCATTGCTCATAAGGTTCCATTTAAACCAC  50
      ||||||||||||||||| |||   ||||||||||  || ||   | |  |
seq2  TTGCCCTCAGTGCCTCCCCAGGCATGCTCATAAG--TCAAT---AGCACC  45

seq1  GT-GCAGCTTTATTATCTCCA-TGTTCATTATCAGATTTAAGTAGAATGC  98
      || |||||||||||||||||| |||||| ||||  | ||||||| |||||
seq2  GTGGCAGCTTTATTATCTCCATTGTTCA-TATC--AATTAAGTAAAATGC  92

seq1  ATTCGAGTTTTAAATCTGCTTGCAGAATCAATATTCAATTG-TAATTTTC  147
      ||||||| |||||||||   ||||||||||||||||||||| ||||||||
seq2  ATTCGAGGTTTAAATCTCGCTGCAGAATCAATATTCAATTGTTAATTTTC  142

seq1  TTCTCTTTGATAAAAT-AACAAAGCCCTATGGACTCTGAAAAGTAAATCA  196
      |||||||||||||||| ||||||||||||| |||||||||||||||||||
seq2  TTCTCTTTGATAAAATAAACAAAGCCCTAT-GACTCTGAAAAGTAAATCA  191

seq1  GTTGGTATTTCCTACTTGTTAAAATGCTCCTTTGAATGAAATGATACAAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTATTTCCTACTTGTTAAAATGCTCCTTTGAATGAAATGATACAAA  241

seq1  TAATTTGGTGGTTATTTTTTTAAATAAGTTTCAGAGAATTAATAATACTG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGGTGGTTATTTTTTTAAATAAGTTTCAGAGAATTAATAATACTG  291

seq1  AAAGGCAACACATTGTTTATTTCATACTTGATTACGTGAATAGTTCAAGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAACACATTGTTTATTTCATACTTGATTACGTGAATAGTTCAAGA  341

seq1  GTAAGAAAGAGAAATCTATAGTGCTAAACAGAAAAAGAAATTACTTCCAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAAAGAGAAATCTATAGTGCTAAACAGAAAAAGAAATTACTTCCAA  391

seq1  AGCCCCCAAATACTTGTAATTTGTTAAGAATGCATTCAAAATATTAGAGC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCCAAATACTTGTAATTTGTTAAGAATGCATTCAAAATATTAGAGC  441

seq1  ATATATACTTTTCACAGAAGCCTAATACATTTAAACTTTAAAATCTATAC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATACTTTTCACAGAAGCCTAATACATTTAAACTTTAAAATCTATAC  491

seq1  ATTACAGGCTTATGGATGTATTTGATTTCACAAAATACTTGTCTGGCATG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGGCTTATGGATGTATTTGATTTCACAAAATACTTGTCTGGCATG  541

seq1  TATAAGGCCTATGCATAAGTCCCTGGGTTTGATCATCAAAACTGGAAAGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGGCCTATGCATAAGTCCCTGGGTTTGATCATCAAAACTGGAAAGA  591

seq1  AAGGGAACAAGGGAGGGAGGAAGATACTAGAGGGAGAGAGGGAAGGAGTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAACAAGGGAGGGAGGAAGATACTAGAGGGAGAGAGGGAAGGAGTG  641

seq1  AGGGATGAAGGGAAAAACAATTAGAGAGGCCTGAAATTAGCTTCTCTTTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATGAAGGGAAAAACAATTAGAGAGGCCTGAAATTAGCTTCTCTTTG  691

seq1  ATAAAAAAGTATGTAATTAGAGCAGACAGCAAGATTTAGCCCCCCCCCCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAAGTATGTAATTAGAGCAGACAGCAAGATTTAGCCCCCCCCCCA  741

seq1  TATGCTTTCCCATTGAAACTAAGCAAAATTAAGATTCCTGTGTACAAACA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTTTCCCATTGAAACTAAGCAAAATTAAGATTCCTGTGTACAAACA  791

seq1  TAGACTAGAAATGTAGGTTTTTAAATCCATGATTGACATTTTAAAATAAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTAGAAATGTAGGTTTTTAAATCCATGATTGACATTTTAAAATAAA  841

seq1  CCAATCTCAAACTTAGTCAATATTGCTATTTTAAAACAACTGTATAAGTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCTCAAACTTAGTCAATATTGCTATTTTAAAACAACTGTATAAGTC  891

seq1  AGATAATTTGGCAAGCAGAAAGTTAAACCAAGTAGCAATAACAGAAAAAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATTTGGCAAGCAGAAAGTTAAACCAAGTAGCAATAACAGAAAAAA  941

seq1  GAGAAAAGACAACAACAACTACTACAAAAATAACAACAAAAACAAAACAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAGACAACAACAACTACTACAAAAATAACAACAAAAACAAAACAA  991

seq1  AGCTCTCAAAACAAAACAAAAACCAAAATAAAATAACAAATAACAAAAAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTCAAAACAAAACAAAAACCAAAATAAAATAACAAATAACAAAAAA  1041

seq1  TTAAACAGTGAAGATTAACAGAGATAAGCACTGCTACCAGCAGAAAAATG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAGTGAAGATTAACAGAGATAAGCACTGCTACCAGCAGAAAAATG  1091

seq1  GTTGAACTTCAAGTTTATACCAGGTAGGATGCAGAAGGGAAAGCAGATAT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAACTTCAAGTTTATACCAGGTAGGATGCAGAAGGGAAAGCAGATAT  1141

seq1  GATTGGTGGATGAATTC  1163
      |||||||||||||||||
seq2  GATTGGTGGATGAATTC  1158


seq1: chr8_6089513_6090660
seq2: B6Ng01-169D22.g_67_1200

seq1  GAATTCACAAAAATATGCTACAAAATACTTATATTAAATATGAAGAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAAAAATATGCTACAAAATACTTATATTAAATATGAAGAAAGA  50

seq1  TTAATCTCTGAATTCTTTCAATTAGTCATACATCAATCTATAAATAGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTCTGAATTCTTTCAATTAGTCATACATCAATCTATAAATAGCAC  100

seq1  AGACACTAGAAGCTTTACACATGGCAATACATTTTAAAATTAATCTTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACTAGAAGCTTTACACATGGCAATACATTTTAAAATTAATCTTAAG  150

seq1  TATGGTAGCTGCGATTGATACACATTGACTTCACTCATTGTTTACCATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTAGCTGCGATTGATACACATTGACTTCACTCATTGTTTACCATGT  200

seq1  GACAAAGACTACTTGGGACATATTTGTAATACTACAAGTTAGGCCATACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGACTACTTGGGACATATTTGTAATACTACAAGTTAGGCCATACT  250

seq1  AATTTTCTAGGGGAAAGAAATTATGTCTTACTTTGTTGTAACATCAGGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTAGGGGAAAGAAATTATGTCTTACTTTGTTGTAACATCAGGAC  300

seq1  ATTTGAGTAAGTAAAAGCAAGTATTTGGTAGAACTAAGACCTGTGTACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGTAAGTAAAAGCAAGTATTTGGTAGAACTAAGACCTGTGTACAT  350

seq1  TGTTCCTGGGAAATATGTAGGATGCGGGGGCTTCTAGTTTGATTCTTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTGGGAAATATGTAGGATGCGGGGGCTTCTAGTTTGATTCTTCCT  400

seq1  AGATGTTATGGAAATTTAGCAATTGTGTACATTTTATGTTTTAACTAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTATGGAAATTTAGCAATTGTGTACATTTTATGTTTTAACTAGAC  450

seq1  TGGATATTAAATGAGGGAGGGAACTGTCCTTGTTGAAAGAGCAGAAATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATTAAATGAGGGAGGGAACTGTCCTTGTTGAAAGAGCAGAAATCA  500

seq1  AGTTATGTGAATGCCATTCTGTCATAGATGATATCAAAGGGATTTTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATGTGAATGCCATTCTGTCATAGATGATATCAAAGGGATTTTTTTT  550

seq1  TTTGTTGTTCTTGCCCTGTTCCAAGTAAGCATGAATCATGGACGTATTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGTTCTTGCCCTGTTCCAAGTAAGCATGAATCATGGACGTATTTG  600

seq1  AATGTTATTTGTATTCAGTTTGGGAATAACACATTCTGGCTACCAGCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTATTTGTATTCAGTTTGGGAATAACACATTCTGGCTACCAGCAGT  650

seq1  GCTGTTATTAATTCTCTCTTCAATGATTAAGCAAGCTGTTTACACTGGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTATTAATTCTCTCTTCAATGATTAAGCAAGCTGTTTACACTGGTG  700

seq1  CCAGCTTGCCTATTCATCTTGGATCAGTATGATATGGGCAGCAGAAACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTGCCTATTCATCTTGGATCAGTATGATATGGGCAGCAGAAACAT  750

seq1  GTGCTAGTTTTAACAATACGTTTGAAGGCTTCGGTGATGCTTGCTCCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAGTTTTAACAATACGTTTGAAGGCTTCGGTGATGCTTGCTCCTTC  800

seq1  TCTCCTCTCTTAGCTGTGCTCATTTTGATTTGGAAGTTGGAGGCTTCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCTCTTAGCTGTGCTCATTTTGATTTGGAAGTTGGAGGCTTCTCT  850

seq1  TGCAGGCTGCGTATTAGCATAAAGGCAATGAAAAGCATAAGCAGGACCCA  900
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGCAGGCTGCGTATTAGCAT-AAGGCAATGAAAAGCATAAGCAGGACCCA  899

seq1  ATATGAAGGCATATCATATATACATGAGACCATGATTTACACTAGTTGGA  950
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATATGAAGGCATATCATATATACATGAGACCATGA-TTACACTAGTTGGA  948

seq1  AGCTTATAAAAAAAAGAGCATTCAATTCCATGACATTAGTGAGCCAATCA  1000
      |||||||  |||||||||||||||||||||||||||||||||||| ||| 
seq2  AGCTTAT--AAAAAAGAGCATTCAATTCCATGACATTAGTGAGCC-ATC-  994

seq1  ATGATATTTTTGAACCAATAAGTAAAACATATAGTTTTCAGAATATTTAT  1050
      |||| ||||||| |||||||||| ||||||||||  || | ||||||| |
seq2  ATGAAATTTTTG-ACCAATAAGTTAAACATATAG--TTAAAAATATTT-T  1040

seq1  ATCT-ACTTATTCTTATTTTTTGCAAAATTATCTAATGTATATTCTCTAT  1099
      |||| ||||| |||   ||||||| |||||||||| | ||| | ||||||
seq2  ATCTAACTTA-TCT--ATTTTTGC-AAATTATCTATTATATTTCCTCTAT  1086

seq1  TAATCTTCAGAATAATTACAAATTCATCTGGG-ATTATTATTTCTCACTC  1148
      | ||| ||||||||||||| |||||||||||| |||||||||||||||||
seq2  T-ATCCTCAGAATAATTAC-AATTCATCTGGGAATTATTATTTCTCACTC  1134


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