BAC Information

Click to search

BAC

Clone NameB6Ng01-169F07
Chromosome8 (Build37)
Map Location 3,200,088 - 3,200,910
singlet/doubletsinglet
Overlap geneInsr
Upstream geneEG664801, EG209786, D630014A15Rik
Downstream geneA430078G23Rik, Arhgef18, Pex11c, 1700019B03Rik, Zfp358, Mcoln1, Pnpla6, C330021F23Rik, 2310057J16Rik, Xab2, Pcp2, Stxbp2, Retn, 1810033B17Rik, LOC664858, Trappc5, Fcer2a, Clec4g, Cd209a, LOC664870, Cd209e, Cd209d, Cd209b, Cd209c, LOC664888, EG384770, EG664905, LOC664915, LOC664922, LOC631071, Cd209f, Cd209g, B130050I23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169F07.bB6Ng01-169F07.g
ACCDH960339DH960340
length822945
definitionDH960339|Mus musculus domesticus DNA, BAC clone: B6Ng01-169F07, 5' end.DH960340|Mus musculus domesticus DNA, BAC clone: B6Ng01-169F07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatcccatcactgtatactccaggagatataagcagaaggatca
gaagttcaaggtcatcagaacaagtacaaggctagcttgggctaaacgaa
aatgagtcttgatctgatagatagatgatagatagaaagatagatagata
gatacattttcaaagaggtaccgcaaaagggaagatgaaaaaattctggg
ttgtttaaattaatgattctaaatttgaacatttgagacataatgggcta
ggtaagttttaagttgggacctggaacactgaaagtctcattcatgactt
atataataattctactggacagctctggttgtttccagaaagtccagcca
atcaaaaggccccagctaaaattaaaaaaaaaaaaaaaagaaaatatttg
tgacagcatgagcaggtggttattttaggggaataaatttaaacatggtg
atcttggttctcaaacacctttccatccgtcttttctatgccctttctca
atcacaaaggtttgaaaagatagatatatgttcttcccacctccctcaca
gctatccagaaacaaccatgtgacccaggtctggcaaataaaatagaaac
agaaatcaagtttggggataaaaactatggaaggttgcaaacatgtttgg
cttgtgtttgtgctacattcctgtttgtttctttgtgttttaaatggttt
tgagaaattctctctctctctctctctctctctctctctctctctctctc
actctctctcacagacacacacacatacacacaaatacaaaaattgccta
gactaaaaaatactacactgac
gaattcaggacagttgaaagctggtggttaaatgcatcatgcgttgtgtg
tgagtgtcgatgtgcaagcaggtgtgtgtgtgtgtctgtgttggtggagg
ttggaggaaccttgggtgtcgttggaggaaccctgagtgtcattggagga
atcttgggtgtcatcagaggaaccttggatgtcatcggaggaacctcaag
tgtcacaccactggtgcttcccatttattttttaaatgaagtctctccct
tggcctcaaattcaacaagtaggctgcgctggctggacagcaagccccag
aacctgcctatctccatgtccctggctctggaattacccaagtgtgcaag
tatgtactaccgtgtccagatatttttacgtggattcctgggattgaaca
caggtccttagactcatgaggcaagcacttgatccactgggccacctctt
cacccccatcccacttttattattataaaccttgctgttttaagacaggg
tctctccaagttgttcagcttggtcttgaacttaatttatagttcagaca
gattcacaacttacatgctttctgcctcagcctggaatgagagcttgtac
caccatgcctaaatacatttttgacagtgtgtgtatacttgctgaggtca
ggctgtgcccttgaggtggctaactttgattgtcaactcgaccacatatt
gaattaactaaaacccaagcagctgggcagacacctatggaggaattttc
ttaattggattattcgaagtaagaaagattcactttgaatatggggttaa
tatcttccagtgtctcctcactcataccagtctgttcatctaccctgttg
ctgagacattctttctctggaattggaactggattcagacttctttggga
tctcaatttagactgaagaccagaagctctccaggaaccctccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_3200088_3200910
seq2: B6Ng01-169F07.b_47_868

seq1  GAATTCCATCCCATCACTGTATACTCCAGGAGATATAAGCAGAAGGATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCCCATCACTGTATACTCCAGGAGATATAAGCAGAAGGATCA  50

seq1  GAAGTTCAAGGTCATCAGAACAAGTACAAGGCTAGCTTGGGCTAAACGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTCAAGGTCATCAGAACAAGTACAAGGCTAGCTTGGGCTAAACGAA  100

seq1  AATGAGTCTTGATCTGATAGATAGATGATAGATAGAAAGATAGATAGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTCTTGATCTGATAGATAGATGATAGATAGAAAGATAGATAGATA  150

seq1  GATACATTTTCAAAGAGGTACCGCAAAAGGGAAGATGAAAAAATTCTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACATTTTCAAAGAGGTACCGCAAAAGGGAAGATGAAAAAATTCTGGG  200

seq1  TTGTTTAAATTAATGATTCTAAATTTGAACATTTGAGACATAATGGGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTAAATTAATGATTCTAAATTTGAACATTTGAGACATAATGGGCTA  250

seq1  GGTAAGTTTTAAGTTGGGACCTGGAACACTGAAAGTCTCATTCATGACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGTTTTAAGTTGGGACCTGGAACACTGAAAGTCTCATTCATGACTT  300

seq1  ATATAATAATTCTACTGGACAGCTCTGGTTGTTTCCAGAAAGTCCAGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATAATTCTACTGGACAGCTCTGGTTGTTTCCAGAAAGTCCAGCCA  350

seq1  ATCAAAAGGCCCCAGCTAAAATTAAAAAAAAAAAAAAAAGAAAATATTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAAGGCCCCAGCTAAAATTAAAAAAAAAAAAAAAAGAAAATATTTG  400

seq1  TGACAGCATGAGCAGGTGGTTATTTTAGGGGAATAAATTTAAACATGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGCATGAGCAGGTGGTTATTTTAGGGGAATAAATTTAAACATGGTG  450

seq1  ATCTTGGTTCTCAAACACCTTTCCATCCGTCTTTTCTATGCCCTTTCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGGTTCTCAAACACCTTTCCATCCGTCTTTTCTATGCCCTTTCTCA  500

seq1  ATCACAAAGGTTTGAAAAGATAGATATATGTTCTTCCCACCTCCCTCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAAAGGTTTGAAAAGATAGATATATGTTCTTCCCACCTCCCTCACA  550

seq1  GCTATCCAGAAACAACCATGTGACCCAGGTCTGGCAAATAAAATAGAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCCAGAAACAACCATGTGACCCAGGTCTGGCAAATAAAATAGAAAC  600

seq1  AGAAATCAAGTTTGGGGATAAAAACTATGGAAGGTTGCAAACATGTTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCAAGTTTGGGGATAAAAACTATGGAAGGTTGCAAACATGTTTGG  650

seq1  CTTGTGTTTGTGCTACATTCCTGTTTGTTTCTTTGTGTTTTAAATGGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGTTTGTGCTACATTCCTGTTTGTTTCTTTGTGTTTTAAATGGTTT  700

seq1  TGAGAAATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  750

seq1  TCTCTCTCTCCCTCCCTCCCTCCTCCACCCCCCACCCCATCCATTGGCTG  800
       ||||||||| |   | | | |    || | | |   ||   |||| || 
seq2  ACTCTCTCTCACAGACACACACACATACACACAAATACAAAAATTGCCTA  800

seq1  GCCTTAAAAACCACTACACTGAC  823
      | | ||||||  |||||||||||
seq2  GAC-TAAAAAATACTACACTGAC  822