BAC Information

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BAC

Clone NameB6Ng01-169O12
Chromosome8 (Build37)
Map Location 127,732,986 - 127,867,070
singlet/doubletdoublet
Overlap geneDisc1
Upstream geneGalnt2, Pgbd5, Cog2, Agt, Capn9, 2310022B05Rik, Ttc13, Arv1, 2310031A18Rik, LOC668444, Trim67, 2810004N23Rik, Gnpat, Exoc8, Gm505, Egln1, Tsnax
Downstream geneSipa1l2, 4933403G14Rik, 2310079N02Rik, E330039K12Rik, BC021891, Kcnk1, Slc35f3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169O12.bB6Ng01-169O12.g
ACCDH960757DH960758
length1,1341,171
definitionDH960757|Mus musculus domesticus DNA, BAC clone: B6Ng01-169O12, 5' end.DH960758|Mus musculus domesticus DNA, BAC clone: B6Ng01-169O12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,865,922 - 127,867,070)(127,732,986 - 127,733,983)
sequence
gaattcaccaggcaaaggaagcacaaggcctcccaaatacccccacgagt
tccctcctctcccaaagatgtcagtcactattaagtatgaaataaagagt
tgactgggctgggacttgctgtcagcgtggctgcccttgagtgctcttgt
tcctgtaaacaatctccacagagccacccattcactccttggacgaacac
ttccctttggcttgttgatgtcctctctatttgggatgagctggtgccac
tcgggtctccctgggagggggtggctagatggtctctggtaacctggctg
ctctccgctgccttctccagcaggaggtaccacacaagcctcatcgaagc
tcctcactaactctggctccgtgtccaggcagccaacagactcgggttct
tctgactcaaaacggaaaggaattccaaagatgtggctgctcccactctg
gtgtactatcagccatgcatggagcctgacagggaggagggcagctgcag
ccacagctgaacactggagtcacccgtgaaccagagcccagtaccactca
gggaaggggaacaggccagagacattggtgtggaggcccgcagcctcagg
cagggcgagagtggtttacacaggttgtggctcaccatcaaggggctatc
atcttggtcctttgtgggtcaagagagtgaaagttagatttgagagttta
aggacaacctcaagaaggcacgtgtataaataagaaggcaagacttccag
tagcttccttcttctgctgaccaaggactctttgtatcaactcgtaaaac
aaactattgtaaactctttccagcagcagcatcagtgtgctgtgaagtac
agttctgtgttggtgaggagccctggggtatctctaccgcacattgcaat
ctttctgtaatagtcagtgatggtaagcatcggtcagacacagaatcact
gatctgtccctgttttatcaacataatcagtggtcaccaggactcaggaa
gatagctattctgtgttacaggggtcaggctacatctttatgctgagttc
ttttgaacccagttcaagtatcagtcactgagtaactagtctttacagaa
gtgctctgtgtgccgctctgctgtcctcctctgt
gaattctttttttaaaaaaaaaggaattaattaatttttttcactccata
ttttattccctccccactcccccattcaccctctgactgttccacatccc
atacctcctccctacccctgtctccacgtggatgtccccaccctctactc
tacatgacctctaacctccctggagcctccagtctcttgagggataggtg
catcatctctgaatgaacacagacccggcagtcctctgccgtatatgtgt
tgggggcctcatatcagctggtgtatgtgcctgtttggtggttcagtgtt
tgagagacctcagggttccagactgagactgctggtcctcctacagagta
gctcttctcctcagcttctttcagcctcccctaattcaacaacaggggac
agctgcttctgtccattggttgggtgcaaacatctgcctctgaccgttta
gggtgagcatatccaggtctttccctttgttcttattccttatacaacac
ggcaaaactgtgatctccacggcacgagcactgtgttggggatgaagtca
agcagagatggtttaaatcggagggaagatgtgtgttaggtgctaggtgt
agaaatgtctccacttcacttgagtctccaccatccctgaggagtcatga
aggtgtcctgctgcagataccaaagggtagatgcagtctaagctgagata
cctgaacgctcttgccttgtcccctctggggccttgttttcccaggacca
gtgtcagtctgtctgtctgagctcctttgtctttcatccattgcagacgg
tttatagcccagagtctgtgctggtgtctgttttcttgggctgattcagt
tctctttgactacatcctcttatgattccctgtggaaacatcgtgtcttg
gtttgtgtttagtgaggttgcagttcttagttagcagaggtacacagtgc
tgggctatagtttgataccagtggagaatggttgtgctagcctgtgggtg
ccattagcacaccactggaggatacagaaattggatgcttgtatttcctt
caggcctagggatctatgctcagggcttggggcttcataagatttctgtt
ccaattgggggatggctctgagatactgcctaaatgtttttatggtgtag
agacaccgacaaggcaactct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_127865922_127867070
seq2: B6Ng01-169O12.b_47_1180 (reverse)

seq1  ACAGAGGAGGACAGGCCAGAGCCGAGCACACAGAGCACATCTGGTAAAGA  50
      ||||||||||||||  ||||||   ||||||||||||| ||| |||||||
seq2  ACAGAGGAGGACAG--CAGAGC--GGCACACAGAGCACTTCT-GTAAAGA  45

seq1  CCTAGTGTACTTCAGTGACTGGAATACCTTGGACTGGGGTTTCAAAAGGA  100
       ||||| ||| ||||||||||  ||| |||| ||||||  |||||||| |
seq2  -CTAGT-TAC-TCAGTGACTG--ATA-CTTGAACTGGG--TTCAAAAGAA  87

seq1  CTCAGCAT-AAGATGTAGGCTGACCCCTTGTAACACAGAATAGCTATCTT  149
      |||||||| ||||||||| |||||||| ||||||||||||||||||||||
seq2  CTCAGCATAAAGATGTAGCCTGACCCC-TGTAACACAGAATAGCTATCTT  136

seq1  CCTGAGTCCTGGTGACCACTGATTATGTTGATTAAAACAGGGACAGATCA  199
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CCTGAGTCCTGGTGACCACTGATTATGTTGA-TAAAACAGGGACAGATCA  185

seq1  GTGATTCTGTGTCCTGACCGATGCTTACCATCACCTGACTATTACAGAAA  249
      |||||||||||| |||||||||||||||||||| ||||||||||||||||
seq2  GTGATTCTGTGT-CTGACCGATGCTTACCATCA-CTGACTATTACAGAAA  233

seq1  GATTGCAATGTGCGGTAGAGATACCCCAGGGCTCCTCACCAACACAGAAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCAATGTGCGGTAGAGATACCCCAGGGCTCCTCACCAACACAGAAC  283

seq1  TGTACTTCACAGCACACTGATGCTGCTGCTGG-AAGAGTTTACAATAGTT  348
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGTACTTCACAGCACACTGATGCTGCTGCTGGAAAGAGTTTACAATAGTT  333

seq1  TGTTTTACGAGTTGATACAAAGAGTCCTTGGTCAGCAGAAGAAGGAAGCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTACGAGTTGATACAAAGAGTCCTTGGTCAGCAGAAGAAGGAAGCT  383

seq1  ACTGGAAGTCTTGCCTTCTTATTTATACACGTGCCTTCTTGAGGTTGTCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAAGTCTTGCCTTCTTATTTATACACGTGCCTTCTTGAGGTTGTCC  433

seq1  TTAAACTCTCAAATCTAACTTTCACTCTCTTGACCCACAAAGGACCAAGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTCTCAAATCTAACTTTCACTCTCTTGACCCACAAAGGACCAAGA  483

seq1  TGATAGCCCCTTGATGGTGAGCCACAACCTGTGTAAACCACTCTCGCCCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGCCCCTTGATGGTGAGCCACAACCTGTGTAAACCACTCTCGCCCT  533

seq1  GCCTGAGGCTGCGGGCCTCCACACCAATGTCTCTGGCCTGTTCCCCTTCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAGGCTGCGGGCCTCCACACCAATGTCTCTGGCCTGTTCCCCTTCC  583

seq1  CTGAGTGGTACTGGGCTCTGGTTCACGGGTGACTCCAGTGTTCAGCTGTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTGGTACTGGGCTCTGGTTCACGGGTGACTCCAGTGTTCAGCTGTG  633

seq1  GCTGCAGCTGCCCTCCTCCCTGTCAGGCTCCATGCATGGCTGATAGTACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGCTGCCCTCCTCCCTGTCAGGCTCCATGCATGGCTGATAGTACA  683

seq1  CCAGAGTGGGAGCAGCCACATCTTTGGAATTCCTTTCCGTTTTGAGTCAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTGGGAGCAGCCACATCTTTGGAATTCCTTTCCGTTTTGAGTCAG  733

seq1  AAGAACCCGAGTCTGTTGGCTGCCTGGACACGGAGCCAGAGTTAGTGAGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACCCGAGTCTGTTGGCTGCCTGGACACGGAGCCAGAGTTAGTGAGG  783

seq1  AGCTTCGATGAGGCTTGTGTGGTACCTCCTGCTGGAGAAGGCAGCGGAGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCGATGAGGCTTGTGTGGTACCTCCTGCTGGAGAAGGCAGCGGAGA  833

seq1  GCAGCCAGGTTACCAGAGACCATCTAGCCACCCCCTCCCAGGGAGACCCG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCAGGTTACCAGAGACCATCTAGCCACCCCCTCCCAGGGAGACCCG  883

seq1  AGTGGCACCAGCTCATCCCAAATAGAGAGGACATCAACAAGCCAAAGGGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCACCAGCTCATCCCAAATAGAGAGGACATCAACAAGCCAAAGGGA  933

seq1  AGTGTTCGTCCAAGGAGTGAATGGGTGGCTCTGTGGAGATTGTTTACAGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTCGTCCAAGGAGTGAATGGGTGGCTCTGTGGAGATTGTTTACAGG  983

seq1  AACAAGAGCACTCAAGGGCAGCCACGCTGACAGCAAGTCCCAGCCCAGTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGAGCACTCAAGGGCAGCCACGCTGACAGCAAGTCCCAGCCCAGTC  1033

seq1  AACTCTTTATTTCATACTTAATAGTGACTGACATCTTTGGGAGAGGAGGG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTTATTTCATACTTAATAGTGACTGACATCTTTGGGAGAGGAGGG  1083

seq1  AACTCGTGGGGGTATTTGGGAGGCCTTGTGCTTCCTTTGCCTGGTGAATT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCGTGGGGGTATTTGGGAGGCCTTGTGCTTCCTTTGCCTGGTGAATT  1133

seq1  C  1149
      |
seq2  C  1134

seq1: chr8_127732986_127733983
seq2: B6Ng01-169O12.g_248_1241

seq1  TCCAGTCTCTTGAGGGATAGGTGCATCATCTCTGAATGAACACAGACCCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTCTCTTGAGGGATAGGTGCATCATCTCTGAATGAACACAGACCCG  50

seq1  GCAGTCCTCTGCCGTATATGTGTTGGGGGCCTCATATCAGCTGGTGTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCCTCTGCCGTATATGTGTTGGGGGCCTCATATCAGCTGGTGTATG  100

seq1  TGCCTGTTTGGTGGTTCAGTGTTTGAGAGACCTCAGGGTTCCAGACTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTTTGGTGGTTCAGTGTTTGAGAGACCTCAGGGTTCCAGACTGAG  150

seq1  ACTGCTGGTCCTCCTACAGAGTAGCTCTTCTCCTCAGCTTCTTTCAGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTGGTCCTCCTACAGAGTAGCTCTTCTCCTCAGCTTCTTTCAGCCT  200

seq1  CCCCTAATTCAACAACAGGGGACAGCTGCTTCTGTCCATTGGTTGGGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTAATTCAACAACAGGGGACAGCTGCTTCTGTCCATTGGTTGGGTGC  250

seq1  AAACATCTGCCTCTGACCGTTTAGGGTGAGCATATCCAGGTCTTTCCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCTGCCTCTGACCGTTTAGGGTGAGCATATCCAGGTCTTTCCCTT  300

seq1  TGTTCTTATTCCTTATACAACACGGCAAAACTGTGATCTCCACGGCACGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTATTCCTTATACAACACGGCAAAACTGTGATCTCCACGGCACGA  350

seq1  GCACTGTGTTGGGGATGAAGTCAAGCAGAGATGGTTTAAATCGGAGGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGTGTTGGGGATGAAGTCAAGCAGAGATGGTTTAAATCGGAGGGAA  400

seq1  GATGTGTGTTAGGTGCTAGGTGTAGAAATGTCTCCACTTCACTTGAGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGTGTTAGGTGCTAGGTGTAGAAATGTCTCCACTTCACTTGAGTCT  450

seq1  CCACCATCCCTGAGGAGTCATGAAGGTGTCCTGCTGCAGATACCAAAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCATCCCTGAGGAGTCATGAAGGTGTCCTGCTGCAGATACCAAAGGG  500

seq1  TAGATGCAGTCTAAGCTGAGATACCTGAACGCTCTTGCCTTGTCCCCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGCAGTCTAAGCTGAGATACCTGAACGCTCTTGCCTTGTCCCCTCT  550

seq1  -GGGCCTTGTTTTCCCAGGACCAGTGTCAGTCTGTCTGTCTGAGCTCCTT  599
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCTTGTTTTCCCAGGACCAGTGTCAGTCTGTCTGTCTGAGCTCCTT  600

seq1  TGTCTTTCATCCATTGCAGACGGTTTTATAGCCCAGAGTCTGTGCTGGTG  649
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGTCTTTCATCCATTGCAGACGG-TTTATAGCCCAGAGTCTGTGCTGGTG  649

seq1  TCTGTTTCCTT-GGCTGATTCAGTTCTCTTTGACTACATCCTCTTATGAT  698
      ||||||| ||| ||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTTCTTGGGCTGATTCAGTTCTCTTTGACTACATCCTCTTATGAT  699

seq1  TCCCTGTGGAAACATCGTGTC-TGGTTTGTGTTTAGTGAGGTTGCAGTTC  747
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCCCTGTGGAAACATCGTGTCTTGGTTTGTGTTTAGTGAGGTTGCAGTTC  749

seq1  TTAG-TAGCAGAGGTACACAGTGCTGGGCTATAGTTTGATACCAGT-GAG  795
      |||| ||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTAGTTAGCAGAGGTACACAGTGCTGGGCTATAGTTTGATACCAGTGGAG  799

seq1  AATGG-TGTGCTAGCCTGTGGGTGGCATTTAGCACACCACTGGAGGATAC  844
      ||||| |||||||||||||||||| || ||||||||||||||||||||||
seq2  AATGGTTGTGCTAGCCTGTGGGTGCCA-TTAGCACACCACTGGAGGATAC  848

seq1  AG-AATTGGATGCTTGTATTTCC-TCAGGCCCCAGGA-CTATGCTCAGGG  891
      || |||||||||||||||||||| |||||||   ||| ||||||||||||
seq2  AGAAATTGGATGCTTGTATTTCCTTCAGGCCTAGGGATCTATGCTCAGGG  898

seq1  C-TGGGGCTTCAATAGAATTCATGTTCCTATTGTGGGAATGCTCTGAGTA  940
      | ||||||||||  ||| ||| |||||| |||| ||||  ||||||||  
seq2  CTTGGGGCTTCATAAGATTTC-TGTTCCAATTGGGGGATGGCTCTGAGAT  947

seq1  ACTGCCTTAATTTTTTTTTTTTATTGTTGTAAAGAGACACCATGACCAAG  990
      ||||||| ||| |||||       || |||  |||||||||  || ||||
seq2  ACTGCCTAAATGTTTTT------ATGGTGT--AGAGACACC--GA-CAAG  986

seq1  GCAACTCT  998
      ||||||||
seq2  GCAACTCT  994