BAC Information

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BAC

Clone NameB6Ng01-169P16
Chromosome8 (Build37)
Map Location 51,923,668 - 51,924,639
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039919, EG667495, LOC100039954, LOC100039966
Downstream geneLOC667517
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169P16.bB6Ng01-169P16.g
ACCDH960810DH960811
length1,216958
definitionDH960810|Mus musculus domesticus DNA, BAC clone: B6Ng01-169P16, 5' end.DH960811|Mus musculus domesticus DNA, BAC clone: B6Ng01-169P16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagaactcttcagctggggaacagggtacccgtaagtacagcttt
acaaggtacgtctggccttgaactttctaacgaaattcaagacagtctat
cagaagtaaagtgggaaatagctttacaaggtatgtttggccttgaactt
tctctagtgttaggagcctttttgttccttttgacatgttatcaagcggt
taaggcagggctgaaaattctggatgaaattcagggcaatctatcagaag
taaagcggggagagagggtaggagcaaagaggaaatatggtacacaaaat
aagtatacaggcctttccacgggtcttgaacccgaggaaaagtttaggtc
aggtaagaatacctggggagagattagaaggaaggaaaagaaaaaagaaa
agaaaaaagataaatttgcggaggtctctaggagaaggagcctatactca
tcactagatgagctcaaggagccagttcttagtagttctgaatcagatga
aaaggctattagggcctggaaggcgctctcccgagcaggtgaggccactg
gacaactaacaaagatcgtccagagacctcaggagtcattctcagatttt
gtggccagaatgacagaggcagcagagcgtatttttgcagatttggagca
agccacacctctggtagaacagctcatttatgagcaagccacacaggagt
gccgagcggccatagccccaagaaagaacaaaggtttacaagactggctc
aggtttgtcgggagcttgggggacctctcaccattgcaggcttagcggcc
gccatcctccaatcccaaaaatgctccatgggcagaaattaatcaacgca
tagatcttgtccaggaacaactagatgtattatggcaaatagctcagctg
ggatgtgaacaaaagtttccgggattgtccgttacttccattcagtatga
gaaatttgctagggcagctaatttgtcaaaaagtctttctcagtatatgt
tacagattgacggctgaatttggaacagacccttcggtattgagacttgc
catcattcaggtcactccacgccgcttggacttgtccctgacaagattac
cattgatctcctcagcatttcctcctaagaatgggtggatggaatatatc
agaatccttgctggataggtggcctctcgttgatctgtgagctcaggccc
acacattgaaagagat
gaattctcatttaaggctgagcactctaaaggttgtcaagtggtggctct
ctgggttaaatgtcatctgctgtgggaagaaatttctatgataagggttg
aagggtcaagagaggggttgattcattggtatagcaatatgtcatcagga
ggcactttactggtgtgatattaattttcttattggcagctattctgatt
gggataagacaaaatctcaacattatctaataagtattttctttataggt
aaagccctagtatggtcttttataacagtgcaagatcatctatacctttg
agaatatcctgttttatttcatcatttatttaatttcgtgtgtgtgtttg
tttttttacaatttcattatcaattctacataatagttatctattagatg
tacaaatagcatggcatacacctctatttttttttttttgtttttttctt
ttctttatttatttatttatttatttattttaaatttttttttttttttt
tggttttggttttggtgtttttgagtcagggtttctctgtgtagccctgg
ctgtcctggaactcactttgtagaccaggctggccttgaactcagaaatc
tgcctgcctctgcctctgcctctgcctcccaagtgctggaattaaaggtg
tgagccaccacacccggcggcttacacctcttatgggggctgtttcttct
ctccacttactatttttcttgcggtgtagaagttttaaccttcatagaat
acaatttgtaaatcatcctttttcataattgggacacttttcagaatgac
tctgtccatgcctaagtaagtgtttctctgctttggagttgggccttgta
gtacaaatttcatgcacctattttatagtgtcaacctcttcgctagctca
cacatggcagagtatggagagaatgtatagatatgggaaggacctgttct
catagtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_51923668_51924639
seq2: B6Ng01-169P16.g_69_1018

seq1  GAATTCTCATTTAAGGCTGAGCACTCTAAAGGTTGTCAAGTGGTGGCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATTTAAGGCTGAGCACTCTAAAGGTTGTCAAGTGGTGGCTCT  50

seq1  CTGGGTTAAATGTCATCTGCTGTGGGAAGAAATTTCTATGATAAGGGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTAAATGTCATCTGCTGTGGGAAGAAATTTCTATGATAAGGGTTG  100

seq1  AAGGGTCAAGAGAGGGGTTGATTCATTGGTATAGCAATATGTCATCAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTCAAGAGAGGGGTTGATTCATTGGTATAGCAATATGTCATCAGGA  150

seq1  GGCACTTTACTGGTGTGATATTAATTTTCTTATTGGCAGCTATTCTGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTTTACTGGTGTGATATTAATTTTCTTATTGGCAGCTATTCTGATT  200

seq1  GGGATAAGACAAAATCTCAACATTATCTAATAAGTATTTTCTTTATAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAAGACAAAATCTCAACATTATCTAATAAGTATTTTCTTTATAGGT  250

seq1  AAAGCCCTAGTATGGTCTTTTATAACAGTGCAAGATCATCTATACCTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCCTAGTATGGTCTTTTATAACAGTGCAAGATCATCTATACCTTTG  300

seq1  AGAATATCCTGTTTTATTTCATCATTTATTTAATTTCGTGTGTGTGTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATCCTGTTTTATTTCATCATTTATTTAATTTCGTGTGTGTGTTTG  350

seq1  TTTTTTTACAATTTCATTATCAATTCTACATAATAGTTATCTATTAGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTACAATTTCATTATCAATTCTACATAATAGTTATCTATTAGATG  400

seq1  TACAAATAGCATGGCATACACCTCTATTTTTTTTTTTTTGTTTTTTTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATAGCATGGCATACACCTCTATTTTTTTTTTTTTGTTTTTTTCTT  450

seq1  TTCTTTATTTATTTATTTATTTATTTATTTTAAATTTTTTTTTTTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTATTTATTTATTTATTTATTTATTTTAAATTTTTTTTTTTTTTTT  500

seq1  TGGTTTTGGTTTTGGTGTTTTTGAGTCAGGGTTTCTCTGTGTAGCCCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTGGTTTTGGTGTTTTTGAGTCAGGGTTTCTCTGTGTAGCCCTGG  550

seq1  CTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAAATC  600

seq1  TGCCTGCCTCTGCCTCTGCCTCTGCCTCCCAAGTGCTGGAATTAAAGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCCTCTGCCTCTGCCTCTGCCTCCCAAGTGCTGGAATTAAAGGTG  650

seq1  TGAGCCACCACACCCGGCGGCTTACACCTCTTATGGGGGCTGTTTCTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCACCACACCCGGCGGCTTACACCTCTTATGGGGGCTGTTTCTTCT  700

seq1  CTCCACTTACTATTTTTCTTGCGGTGTAGAAGTTTTAAACCTTCATAGAA  750
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTCCACTTACTATTTTTCTTGCGGTGTAGAAGTTTT-AACCTTCATAGAA  749

seq1  TACAATTTGTAAATCATCCTTTTTCATAATTGGGACACTTTTCAGAATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATTTGTAAATCATCCTTTTTCATAATTGGGACACTTTTCAGAATGA  799

seq1  CTCTGTCCATGCCTAAGTTAAAGTGTTTCTCTGCTTTGGAGTTTGGGCCT  850
      ||||||||||||||||||  ||||||||||||||||||||| ||||||||
seq2  CTCTGTCCATGCCTAAGT--AAGTGTTTCTCTGCTTTGGAG-TTGGGCCT  846

seq1  TGTAGGTACAAATTTCATGCAACCTATTTTTAATAAGTGTTCAACCTCTT  900
      |||| ||||||||||||||| |||||||||  || |||| ||||||||||
seq2  TGTA-GTACAAATTTCATGC-ACCTATTTT--AT-AGTG-TCAACCTCTT  890

seq1  CGCTAGCTCACCACATGGCAGAGGTATTGAAAGAGAAATGTTATTAGGAT  950
      |||||||||| ||||||||||| |||| || ||   |||| |||   |||
seq2  CGCTAGCTCA-CACATGGCAGA-GTATGGAGAG---AATG-TAT--AGAT  932

seq1  ATTGGGGAAGGGGACCTGTTCT  972
      ||  |||||  |||||||||||
seq2  AT--GGGAA--GGACCTGTTCT  950