BAC Information

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BAC

Clone NameB6Ng01-170P13
Chromosome8 (Build37)
Map Location 110,111,443 - 110,273,162
singlet/doubletdoublet
Overlap genePsmd7, LOC100041744, LOC668038
Upstream geneCdh1, Tmco7, Has3, 5830457O10Rik, Cirh1a, EG234703, Sntb2, Vps4a, Cog8, Nip7, Tmed6, Terf2, EG667847, Cyb5b, LOC100042791, Nfat5, Nqo1, Nob1, Wwp2, LOC100042812
Downstream geneAtbf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170P13.bB6Ng01-170P13.g
ACCDH961553DH961554
length1,0591,022
definitionDH961553|Mus musculus domesticus DNA, BAC clone: B6Ng01-170P13, 5' end.DH961554|Mus musculus domesticus DNA, BAC clone: B6Ng01-170P13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,272,101 - 110,273,162)(110,111,443 - 110,112,463)
sequence
gaattccaagggaacaaataccaaaataattcgtgctggcattattaaaa
ttataataaaactattgggctacactccacaaagatctagccatatttct
ctgaagctagttgaatactttacttataacaccttttggcagggaagggt
gcggttacccaaactgctgatggtcactaatatctctcaagacaaacccc
tacaaacccaatataggaattcccagaacccaagggcatctcagccctgt
tcttgtttttagataagatcccagtttgtagcccaaactgttttcaaact
ctcaatcctcctacctcagctttctaagcgctgggataacacgtatggac
cttcatgtgatgcccagcctccagccaaagtctacccaggagtgaacgtc
aaaatctttaaagagagttagtgtaaaaccccaaggagatttgggaagca
agaggagtcagggaaagagtgtgatgaagaaaatacctcagcacaaggca
gactgctttcaaaagcttttcagtcgtaattagcaaggtgatgctaaact
tgatacagaatttgaagacagaatgctttgtcttcttcatagctttaata
taatagatccagcatttttagttgatggctgtcatcacctgtccatcaga
ttccaaagaaatagacccaatagcagcacatgtgtgcacatgtgtgtgtg
cacatgtgcatggtattctaagaaggtggatcgtataattgtggaaggtt
acaagtccaaaatccacaacattgaccaatacgctacagactcaaggaaa
tgacgtacaacctgagtcagtagtttagctacagacagaaactgctcctt
tcaagtcagtccttctacaaagaccttcaactgaagagagactcagccac
attacgaaaggtaatctgctctattagtctactgatcaggctaacttcat
cttaaatatgcctacactgagagggcatggggggggattgttatatttta
aattaaaactgtaatgtcataagaaaattttatgtatgtctaatatttta
gtttaaaaa
gaattcagagtcaaaaggctccgtcttgaggttttttttttttttttttt
tttttggctctggttgagttagctgcacaaagcctgcttcagaccaggca
ctagcgccgacttgactgcaagtagactccctactggaccttcatatttg
ttaactcctcacactaattatcttgtaaaacttccgaacacgtgcaacag
gtctggccggatgaacggctggagcaggcaagggtggcagtgagctaccc
aagggaactgtaggctggccccaatctgcacctgcctcgtttttagagga
acaagccgacaccttattcattcccattttaaaggtaccattcgaccaga
atcccaaatcgaaacttggctatgatccctgcctcatccagaaaatcgtt
catcggggactccgagaccggggtttcagtgacagcttttacaggcacgg
gcacacgagactgaagctcggtcttaaacggcgcccagccgttctgggaa
aaggcgcggcctcggcgggtagcatcgttccggctccggggcctcgccag
gcgggccagactcaggagtggcggcctcggtgggggtgcgaggctgtcaa
tgggtaccgagcaccgcggtgtggagccgctggggtcgcttgtcccaacc
cgtgtccccggccgccgcgtttgtgcccggcgcgcccgtgactcagcagc
cctgcgccgtgtggccgccacgcgccacccgctcaccggttgaaatgatc
caccacactgagcagcaccagggggtgaactaccaccttctgcatcgcca
gctccggcatcgcgacacagctcgaccatcggccggcttcctgtaacccg
caaacaccagcaaccgcagcgacacaggccgctcctctaggcctcagcac
ctccccttcccggtttgaccgccgctgcacagtcgacttccgcctccaga
gcgcttttgcgctcgtgctcgccctgttcgtcaggggcgtcatcttgaga
aggtaaagaaccgtcttgcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_110272101_110273162
seq2: B6Ng01-170P13.b_48_1106 (reverse)

seq1  TTTTTAAACTAAAATATTAG-CATATATTAAAATTTTTTTCTTATGACAT  49
      |||||||||||||||||||| |||| || |||    ||||||||||||||
seq2  TTTTTAAACTAAAATATTAGACATACATAAAA----TTTTCTTATGACAT  46

seq1  TACAGTTTTTAATTTAAATATAACAATCCCCCCCCATGCCCTCTCAGTGT  99
      ||||||||| | || |||||||||||||||||||||||||||||||||||
seq2  TACAGTTTTAATTTAAAATATAACAATCCCCCCCCATGCCCTCTCAGTGT  96

seq1  AGGCATATTTAAGATGAAGTTAGCCTGATCAGTAGACTAATAGAGCAGAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATATTTAAGATGAAGTTAGCCTGATCAGTAGACTAATAGAGCAGAT  146

seq1  TACCTTTCGTAATGTGGCTGAGTCTCTCTTCAGTTGAAGGTCTTTGTAGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTCGTAATGTGGCTGAGTCTCTCTTCAGTTGAAGGTCTTTGTAGA  196

seq1  AGGACTGACTTGAAAGGAGCAGTTTCTGTCTGTAGCTTAACTACTGACTC  249
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGGACTGACTTGAAAGGAGCAGTTTCTGTCTGTAGCTAAACTACTGACTC  246

seq1  AGGTTGTACGTCATTTCCTTGAGTCTGTAGCCTATTGGTCAATGTTGTGG  299
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGGTTGTACGTCATTTCCTTGAGTCTGTAGCGTATTGGTCAATGTTGTGG  296

seq1  ATTTTGGACTTGTAACCTTCCACAATTATACGATCCACCTTCTTAGAATA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGACTTGTAACCTTCCACAATTATACGATCCACCTTCTTAGAATA  346

seq1  CCATGCACATGTGCACACACACATGTGCACACATGTGCTGCTATTGGGTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCACATGTGCACACACACATGTGCACACATGTGCTGCTATTGGGTC  396

seq1  TATTTCTTTGGAATCTGATGGACAGGTGATGACAGCCATCAACTAAAAAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTTGGAATCTGATGGACAGGTGATGACAGCCATCAACTAAAAAT  446

seq1  GCTGGATCTATTATATTAAAGCTATGAAGAAGACAAAGCATTCTGTCTTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGATCTATTATATTAAAGCTATGAAGAAGACAAAGCATTCTGTCTTC  496

seq1  AAATTCTGTATCAAGTTTAGCATCACCTTGCTAATTACGACTGAAAAGCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTGTATCAAGTTTAGCATCACCTTGCTAATTACGACTGAAAAGCT  546

seq1  TTTGAAAGCAGTCTGCCTTGTGCTGAGGTATTTTCTTCATCACACTCTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAGCAGTCTGCCTTGTGCTGAGGTATTTTCTTCATCACACTCTTT  596

seq1  CCCTGACTCCTCTTGCTTCCCAAATCTCCTTGGGGTTTTACACTAACTCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGACTCCTCTTGCTTCCCAAATCTCCTTGGGGTTTTACACTAACTCT  646

seq1  CTTTAAAGATTTTGACGTTCACTCCTGGGTAGACTTTGGCTGGAGGCTGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAAGATTTTGACGTTCACTCCTGGGTAGACTTTGGCTGGAGGCTGG  696

seq1  GCATCACATGAAGGTCCATACGTGTTATCCCAGCGCTTAGAAAGCTGAGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCACATGAAGGTCCATACGTGTTATCCCAGCGCTTAGAAAGCTGAGG  746

seq1  TAGGAGGATTGAGAGTTTGAAAACAGTTTGGGCTACAAACTGGGATCTTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGGATTGAGAGTTTGAAAACAGTTTGGGCTACAAACTGGGATCTTA  796

seq1  TCTAAAAACAAGAACAGGGCTGAGATGCCCTTGGGTTCTGGGAATTCCTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAAACAAGAACAGGGCTGAGATGCCCTTGGGTTCTGGGAATTCCTA  846

seq1  TATTGGGTTTGTAGGGGTTTGTCTTGAGAGATATTAGTGACCATCAGCAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGGTTTGTAGGGGTTTGTCTTGAGAGATATTAGTGACCATCAGCAG  896

seq1  TTTGGGTAACCGCACCCTTCCCTGCCAAAAGGTGTTATAAGTAAAGTATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTAACCGCACCCTTCCCTGCCAAAAGGTGTTATAAGTAAAGTATT  946

seq1  CAACTAGCTTCAGAGAAATATGGCTAGATCTTTGTGGAGTGTAGCCCAAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAGCTTCAGAGAAATATGGCTAGATCTTTGTGGAGTGTAGCCCAAT  996

seq1  AGTTTTATTATAATTTTAATAATGCCAGCACGAATTATTTTGGTATTTGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTATTATAATTTTAATAATGCCAGCACGAATTATTTTGGTATTTGT  1046

seq1  TCCCTTGGAATTC  1062
      |||||||||||||
seq2  TCCCTTGGAATTC  1059

seq1: chr8_110111443_110112463
seq2: B6Ng01-170P13.g_68_1089

seq1  GAATTCAGACTCAAAAGGCTCCGTCTTGAGGTTTTTTTTTTTTTTTTTTT  50
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGTCAAAAGGCTCCGTCTTGAGGTTTTTTTTTTTTTTTTTTT  50

seq1  TTTTTGGCTCTGGTTGAGTTAGCTGCACAAAGCCTGCTTCAGACCAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGCTCTGGTTGAGTTAGCTGCACAAAGCCTGCTTCAGACCAGGCA  100

seq1  CTAGCGCCGACTTGACTGCAAGTAGACTCCCTACTGGACCTTCATATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCGCCGACTTGACTGCAAGTAGACTCCCTACTGGACCTTCATATTTG  150

seq1  TTAACTCCTCACACTAATTATCTTGTAAAACTTCCGAACACGTGCAACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTCCTCACACTAATTATCTTGTAAAACTTCCGAACACGTGCAACAG  200

seq1  GTCTGGCCGGATGAACGGCTGGAGCAGGCAAGGGTGGCAGTGAGCTACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGCCGGATGAACGGCTGGAGCAGGCAAGGGTGGCAGTGAGCTACCC  250

seq1  AAGGGAACTGTAGGCTGGCCCCAATCTGCACCTGCCTCGTTTTTAGAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAACTGTAGGCTGGCCCCAATCTGCACCTGCCTCGTTTTTAGAGGA  300

seq1  ACAAGCCGACACCTTATTCATTCCCATTTTAAAGGTACCATTCGACCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCCGACACCTTATTCATTCCCATTTTAAAGGTACCATTCGACCAGA  350

seq1  ATCCCAAATCGAAACTTGGCTATGATCCCTGCCTCATCCAGAAAATCGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAAATCGAAACTTGGCTATGATCCCTGCCTCATCCAGAAAATCGTT  400

seq1  CATCGGGGACTCCGAGACCGGGGTTTCAGTGACAGCTTTTACAGGCACGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGGGGACTCCGAGACCGGGGTTTCAGTGACAGCTTTTACAGGCACGG  450

seq1  GCACACGAGACTGAAGCTCGGTCTTAAACGGCGCCCAGCCGTTCTGGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACGAGACTGAAGCTCGGTCTTAAACGGCGCCCAGCCGTTCTGGGAA  500

seq1  AAGGCGCGGCCTCGGCGGGTAGCATCGTTCCGGCTCCGGGGCCTCGCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCGCGGCCTCGGCGGGTAGCATCGTTCCGGCTCCGGGGCCTCGCCAG  550

seq1  GCGGGCCAGACTCAGGAGTGGCGGCCTCGGTGGGGGTGCGAGGCTGTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGCCAGACTCAGGAGTGGCGGCCTCGGTGGGGGTGCGAGGCTGTCAA  600

seq1  TGGGTACCGAGCACCGCGGTGTGGAGCCGCTGGGGTCGCTTGTCCCAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTACCGAGCACCGCGGTGTGGAGCCGCTGGGGTCGCTTGTCCCAACC  650

seq1  CGTGTCCCCGGCCGCCGCGTTTGTGCCCGGCGCGCCCGTGACTCAGCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTCCCCGGCCGCCGCGTTTGTGCCCGGCGCGCCCGTGACTCAGCAGC  700

seq1  CCTGCGCCGTGTGGCCGCCACGCGCCACCCGCTCACCGGTTGAAATGATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCGCCGTGTGGCCGCCACGCGCCACCCGCTCACCGGTTGAAATGATC  750

seq1  CACCACACTGAGCAGCACCAGGGGGTGAACCACCACCTTCTGCACCGCCA  800
      |||||||||||||||||||||||||||||| ||||||||||||| |||||
seq2  CACCACACTGAGCAGCACCAGGGGGTGAACTACCACCTTCTGCATCGCCA  800

seq1  GCTCCGGCATCGCGACACAGCCCGACCACCGGCCCGGCTCCCTGCAACCC  850
      ||||||||||||||||||||| |||||| ||| |||||| |||| |||||
seq2  GCTCCGGCATCGCGACACAGCTCGACCATCGG-CCGGCTTCCTGTAACCC  849

seq1  GCAAACACCAGCAACCGCAGCGACACAGGCCGCTCCTCCAGGCCCCAGCA  900
      |||||||||||||||||||||||||||||||||||||| ||||| |||||
seq2  GCAAACACCAGCAACCGCAGCGACACAGGCCGCTCCTCTAGGCCTCAGCA  899

seq1  CCTCCCCTT-CCGGTTTGACCGCCGCTGCACAGTCGACTTCCGCTCCCAG  949
      ||||||||| ||||||||||||||||||||||||||||||||||  ||||
seq2  CCTCCCCTTCCCGGTTTGACCGCCGCTGCACAGTCGACTTCCGCCTCCAG  949

seq1  AGCGC-TTTGCGCTCGTGCCCGCCCTG-TCGCCAGGGGCGCCATCTTGAG  997
      ||||| ||||||||||||| ||||||| ||| |||||||| |||||||||
seq2  AGCGCTTTTGCGCTCGTGCTCGCCCTGTTCGTCAGGGGCGTCATCTTGAG  999

seq1  AAAGGGAAAGAACCGCCTTGCCTT  1021
       |||| ||||||||| ||||||||
seq2  -AAGGTAAAGAACCGTCTTGCCTT  1022