BAC Information

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BAC

Clone NameB6Ng01-171L18
Chromosome8 (Build37)
Map Location 43,436,138 - 43,437,195
singlet/doubletsinglet
Overlap genenone
Upstream geneAsah1, Frg1, LOC100039376, Gm1815, LOC671994, Zfp353, EG620772
Downstream geneLOC628212, Triml1, LOC622082, EG622117, LOC100039417, Zfp42
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-171L18.bB6Ng01-171L18.g
ACCGA000535GA000536
length1,0401,188
definitionB6Ng01-171L18.b B6Ng01-171L18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagtttccagaaataaagtcataccactgtaaaagatgccacaa
ggctgatggacagaaaagaacttcaccatcttgtaggatatctttactct
ctgaaaaagtcaatcattgtccacctctgtacagcactagtatcctttct
gctgttgtgtaaaatgtcctgcagtgtattagtacagcactaatttctac
aaacagaaacagcatatgaggcttaaagcagagactttgctatgatgtgc
ctgatgttttcaccaatgtatttgaaaaaacacttaatccgttattttct
ttgttctgtcactgtaaaaatttcatgaaactatttccatgctggaacat
gttcctttgttatcccagacaatgacaactcatagttggcccccaagtta
acttcatcttatattctttgatttgaaaactgtgttttccaccaagaggg
cttaatgacatttataaatgaggaaatttttattagcaaattctaaacta
attacatattacaagatacttttaataactttacaattattgggaataac
atgggtttaacattaaagcctagaattctacaaaagatccactgagaact
aacgaagtttgcttagaaggaaataaaggaaagttaccattcacaacatt
ttactgcttcaaaagttactagagacatagttctgtggggtactggttag
gtcatattgttgatcctcctatagggttgccgacccctttaactccttgg
gtactttctctagcttcttctttaggggccctgtgtctctagttgcataa
ttagcagaggatggcctcattggccatcaatgggaggagaggcccttggg
tcttgcgaagatcatatgccccagtacagggtcaggagcagagtgggtgg
attggggagcaagccaggggcaagtatatggtacttcagatagcattgaa
tatgtaatgaagaaatatctaataacttaaaattcaaaaatgtactatac
ttattactatagttaggaatatttctctgtggtccactct

gaattctgcttatgagcatgtattcaaaaaaattaaataaattattttgg
ccaacttatctgatgcactcctgtgttctttgaaacatttgtaataacca
ttatatagaatcagactaaatgtacatccgttgatagatgtataaagaag
attaccatagacatgcgcgtgcgcacatacagacacacacacacacatat
gcatacatatgcacaggcatgtttgtcacctagaaaactattcacagtaa
gaagtaagtcagtctctgttgcataatcccagagaaacttatgcaaggag
aaataatggaggattattcattaagaaagactctttatttactcatatga
agaatctataaaatttaagttcacagaaccaaaaaccgaatgagtaacca
aggcagatgtttggtagctaataattaaaaatacaacgtttaacaaatga
ggaatacattcaagcatctacttcatagcatggttaatatagttaatact
gcattttgaaaatctcttgttgaattattttaattattctcaccatcaaa
aatttgaagtttatgaagcagtgtttatgttaattacagaactgagctat
aaacagctgcatagatatttcaaagtattgcattgaacttaaatatatac
aattcttaattatcaatatattttaacttctatttgcagcaatatacttg
ataaatatgtgtaggcatattaagaaagtttttctttgggattattcagt
ataagaacacttcctagatatagtcagctaacatctatgatagatatcac
caaataaaatgccatagcactttctgtcatcattaggaattcctgtagtg
ccctttactatcctcaaaaagttacagccaagcaagctaagaccattctt
tccttctttttatctccttaaggagtcttggatccaatgtcctaatacta
ccttaacatgaatttgtcacaccggtcttctgcagcagtaaaattattta
aaataatagtatcccacaggaaacctctggacttcctcactaacaagaaa
caaatggtttggtcaattggacagaacctgagactttaattcagccttgg
agagccagacagaaacttacaagtaaacgttccagaatttaccatctcac
atgcactggtactagctgatgtgagtatcatacacaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_43436138_43437195
seq2: B6Ng01-171L18.b_47_1086 (reverse)

seq1  AGAGTGGACCACAGGAGAAAATTATTTCTAAAACTAATAGTAATAAGTAT  50
      ||||||||||||| ||||||  |||| ||  |||| ||||||||||||||
seq2  AGAGTGGACCACA-GAGAAA--TATTCCT--AACT-ATAGTAATAAGTAT  44

seq1  AGTAACATTTTTTGGATTTTTAAAATTTTATTAGATATTTTCTTCATTTA  100
      ||| ||||||||  || ||||||    |||||||||| |||||||| |||
seq2  AGT-ACATTTTT--GAATTTTAA---GTTATTAGATA-TTTCTTCA-TTA  86

seq1  CATTTCAAATGCTATCCTGAAAGTACCATATACTTGCCCCCTGCCCTGCT  150
      ||| |  |||||||| ||| |||||||||||||||| |||||| | ||||
seq2  CATATTCAATGCTAT-CTG-AAGTACCATATACTTG-CCCCTGGCTTGCT  133

seq1  CCCCAATCCACCCACTCCTGCTTCCTGACCCTGTACTGGGGCATATGATC  200
      |||||||||||||||| |||| ||||||||||||||||||||||||||||
seq2  CCCCAATCCACCCACT-CTGC-TCCTGACCCTGTACTGGGGCATATGATC  181

seq1  TTCGCAAGA-CCAAGGGCCTCTCCTCCCATTGATGGCCAATGAGGCCATC  249
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTCGCAAGACCCAAGGGCCTCTCCTCCCATTGATGGCCAATGAGGCCATC  231

seq1  CTCTGCTAATTATGCAACTAGAGACACAGGGCCCCTAAAGAAGAAGCTAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTAATTATGCAACTAGAGACACAGGGCCCCTAAAGAAGAAGCTAG  281

seq1  AGAAAGTACCCAAGGAGTTAAAGGGGTCGGCAACCCTATAGGAGGATCAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTACCCAAGGAGTTAAAGGGGTCGGCAACCCTATAGGAGGATCAA  331

seq1  CAATATGACCTAACCAGTACCCCACAGAACTATGTCTCTAGTAACTTTTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATGACCTAACCAGTACCCCACAGAACTATGTCTCTAGTAACTTTTG  381

seq1  AAGCAGTAAAATGTTGTGAATGGTAACTTTCCTTTATTTCCTTCTAAGCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTAAAATGTTGTGAATGGTAACTTTCCTTTATTTCCTTCTAAGCA  431

seq1  AACTTCGTTAGTTCTCAGTGGATCTTTTGTAGAATTCTAGGCTTTAATGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCGTTAGTTCTCAGTGGATCTTTTGTAGAATTCTAGGCTTTAATGT  481

seq1  TAAACCCATGTTATTCCCAATAATTGTAAAGTTATTAAAAGTATCTTGTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCCATGTTATTCCCAATAATTGTAAAGTTATTAAAAGTATCTTGTA  531

seq1  ATATGTAATTAGTTTAGAATTTGCTAATAAAAATTTCCTCATTTATAAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTAATTAGTTTAGAATTTGCTAATAAAAATTTCCTCATTTATAAAT  581

seq1  GTCATTAAGCCCTCTTGGTGGAAAACACAGTTTTCAAATCAAAGAATATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTAAGCCCTCTTGGTGGAAAACACAGTTTTCAAATCAAAGAATATA  631

seq1  AGATGAAGTTAACTTGGGGGCCAACTATGAGTTGTCATTGTCTGGGATAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAAGTTAACTTGGGGGCCAACTATGAGTTGTCATTGTCTGGGATAA  681

seq1  CAAAGGAACATGTTCCAGCATGGAAATAGTTTCATGAAATTTTTACAGTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAACATGTTCCAGCATGGAAATAGTTTCATGAAATTTTTACAGTG  731

seq1  ACAGAACAAAGAAAATAACGGATTAAGTGTTTTTTCAAATACATTGGTGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAACAAAGAAAATAACGGATTAAGTGTTTTTTCAAATACATTGGTGA  781

seq1  AAACATCAGGCACATCATAGCAAAGTCTCTGCTTTAAGCCTCATATGCTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCAGGCACATCATAGCAAAGTCTCTGCTTTAAGCCTCATATGCTG  831

seq1  TTTCTGTTTGTAGAAATTAGTGCTGTACTAATACACTGCAGGACATTTTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTTGTAGAAATTAGTGCTGTACTAATACACTGCAGGACATTTTA  881

seq1  CACAACAGCAGAAAGGATACTAGTGCTGTACAGAGGTGGACAATGATTGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACAGCAGAAAGGATACTAGTGCTGTACAGAGGTGGACAATGATTGA  931

seq1  CTTTTTCAGAGAGTAAAGATATCCTACAAGATGGTGAAGTTCTTTTCTGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCAGAGAGTAAAGATATCCTACAAGATGGTGAAGTTCTTTTCTGT  981

seq1  CCATCAGCCTTGTGGCATCTTTTACAGTGGTATGACTTTATTTCTGGAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAGCCTTGTGGCATCTTTTACAGTGGTATGACTTTATTTCTGGAAA  1031

seq1  CTTGAATTC  1058
      |||||||||
seq2  CTTGAATTC  1040


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