BAC Information

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BAC

Clone NameB6Ng01-173D09
Chromosome8 (Build37)
Map Location 101,516,657 - 101,517,701
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041173, EG636915
Downstream geneCdh8, A330008L17Rik, LOC667531
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173D09.bB6Ng01-173D09.g
ACCGA001619GA001620
length1,2091,042
definitionB6Ng01-173D09.b B6Ng01-173D09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctgaacatgataaaaacaatctacagcaaacca
atagtcaatgtcaaagtaaatggtcagaagctggaagcaatcctactaaa
atcagggactagacaaggctgccctctttctccctacctattcaacattg
tacttgaggtcctagccagagcaattccataacaaaaggagatcaaggag
ataaaaattgggaaggaagaattcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagcttcagtgaagtagctggatgtaaaattaactcaaacaag
tcaatggcccttctgtacacaaaggataaacagagaaagaaattagggaa
acaacacccttaacaatagtcacaaataatataaaataccttggtgtgac
tctaactaaggaaatgaaagatatgcatgataagaacttcaagtctctga
agaaagaaattaaagaagatcccagaagatggaaagatctcccatgttca
tggattggcaggaacaatatagtaaaaatgactatcttgccaaaagcaat
ctacagattcaatgcaatccccatcaaaattccatctcaattcttcaaag
aattagaaagggaaatctgcaaattcatctggaataacaaaaaacctagg
atagcaaaaactcttcccaaggataaaagaacctctggtggtatcaccat
gcctgacataaagctttactacagagcaattgtgataaaaacaccatggt
actgttatagctacagacaagtagaccaatggaatagaattgaagaacca
gaaatgaacccacacacctatgttcacttgatctttgacaagaaagctaa
aaccatccagtggaaaaaagaaagcattttcaacaaatggtgctggcaca
actggtggttaacatgtagaagaatgcgaattgatccattcctatctctt
gtactaaggtcaaatctagtggatcaagggactccacataaaatgagagg
aacactaaacttatagagagaagtggtaaaagctcaaatattattgccca
cagggaaaatcctgatagacagcaatgctgtgtttgtaagatggattaga
tatgactcataaattgccaagcttctgtagcaagaaccgtcattgagaca
caatggtta

gaattcattcattttgttgaccacatctgagactgacatctctaaatttg
gctggaatcaatggatgctaggaagtgggttgtgaagatgctgtcatttc
tgcataaacacaggtaataatgataacaatctatcttctatctcctaccc
agtcttctcagttttcagcttggacaatgaatgcttttagaaggtaataa
caagaaagacacatacggttttctattgagcatgagacattttttaaagt
acctttcattaaagatctcagagaggtatacacatgtatatacatgtgca
tatatacatgaaacaataagtaatgaaaaagtgtctatgaatttgaaaga
gaacagagagggctctataaaagggggtggaaaaggaaggaagaaattgt
gcaattataatctcaaaaaaaaaaaaaacaatgaggtaaggtctgtaccc
ttgtcctcaggatagtatacctaagaacaccaaacttcactatgaatgta
gacacatcctaggatttaaacagaattaaataaaattaaaataaataaaa
cactgaattttcttccagtgttttaatagtctttgtaaagacttgtagaa
gaataggtggaaggactgtgaacaccaaaggggacaggaactccacagga
gaactaacagagtcaactaacctggacccttgggacccttagaatctgaa
ccatcaacaaaagagcatacaaaggcttgacttaggcctccctacacata
tgtagcagatgtgcagcttggccttcatgtgggtcctgaatgacttttac
caggaactgggcttggacgagtttgctgtagcaacagaaaaattaactgg
ttctagccatgacttgaagtgaattactgtttgtgaatgtataaaggtaa
acacaagataggcactagaaatggattacagcagaaatgtaaaggaatgg
gtgagaatttagtaattattaatctactagagacccagtctactggtgcc
tttggtacaactgtgactggatctgctctgccttcagaggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_101516657_101517701
seq2: B6Ng01-173D09.g_68_1109 (reverse)

seq1  ATCCTCTGAAGGCAGAAGCAGAACCCAGTCACAAGTTGGTACCAAAGGCA  50
      ||||||||||||||| ||||| | |||||||| |||| ||||||||||||
seq2  ATCCTCTGAAGGCAG-AGCAG-ATCCAGTCAC-AGTT-GTACCAAAGGCA  46

seq1  CCAGTAGACTGGGTCTCTAGTAGATTAATAATTACT-AATTCTCACCCAT  99
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCAGTAGACTGGGTCTCTAGTAGATTAATAATTACTAAATTCTCACCCAT  96

seq1  TCCTTTACATTTCTGCTGTAATCCATTTCTAGTGCCTATCTTGTGTTTAC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTACATTTCTGCTGTAATCCATTTCTAGTGCCTATCTTGTGTTTAC  146

seq1  CTTTATACATTCACAAACAGTAATTCACTTCAAGTCATGGCTAGAACCAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATACATTCACAAACAGTAATTCACTTCAAGTCATGGCTAGAACCAG  196

seq1  TTAATTTTTCTGTTGCTACAGCAAACTCGTCCAAGCCCAGTTCCTGGTAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTTCTGTTGCTACAGCAAACTCGTCCAAGCCCAGTTCCTGGTAA  246

seq1  AAGTCATTCAGGACCCACATGAAGGCCAAGCTGCACATCTGCTACATATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCATTCAGGACCCACATGAAGGCCAAGCTGCACATCTGCTACATATG  296

seq1  TGTAGGGAGGCCTAAGTCAAGCCTTTGTATGCTCTTTTGTTGATGGTTCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGGAGGCCTAAGTCAAGCCTTTGTATGCTCTTTTGTTGATGGTTCA  346

seq1  GATTCTAAGGGTCCCAAGGGTCCAGGTTAGTTGACTCTGTTAGTTCTCCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTAAGGGTCCCAAGGGTCCAGGTTAGTTGACTCTGTTAGTTCTCCT  396

seq1  GTGGAGTTCCTGTCCCCTTTGGTGTTCACAGTCCTTCCACCTATTCTTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGTTCCTGTCCCCTTTGGTGTTCACAGTCCTTCCACCTATTCTTCT  446

seq1  ACAAGTCTTTACAAAGACTATTAAAACACTGGAAGAAAATTCAGTGTTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTCTTTACAAAGACTATTAAAACACTGGAAGAAAATTCAGTGTTTT  496

seq1  ATTTATTTTAATTTTATTTAATTCTGTTTAAATCCTAGGATGTGTCTACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTTAATTTTATTTAATTCTGTTTAAATCCTAGGATGTGTCTACA  546

seq1  TTCATAGTGAAGTTTGGTGTTCTTAGGTATACTATCCTGAGGACAAGGGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGTGAAGTTTGGTGTTCTTAGGTATACTATCCTGAGGACAAGGGT  596

seq1  ACAGACCTTACCTCATTGTTTTTTTTTTTTTTGAGATTATAATTGCACAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACCTTACCTCATTGTTTTTTTTTTTTTTGAGATTATAATTGCACAA  646

seq1  TTTCTTCCTTCCTTTTCCACCCCCTTTTATAGAGCCCTCTCTGTTCTCTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCCTTCCTTTTCCACCCCCTTTTATAGAGCCCTCTCTGTTCTCTT  696

seq1  TCAAATTCATAGACACTTTTTCATTACTTATTGTTTCATGTATATATGCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTCATAGACACTTTTTCATTACTTATTGTTTCATGTATATATGCA  746

seq1  CATGTATATACATGTGTATACCTCTCTGAGATCTTTAATGAAAGGTACTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATATACATGTGTATACCTCTCTGAGATCTTTAATGAAAGGTACTT  796

seq1  TAAAAAATGTCTCATGCTCAATAGAAAACCGTATGTGTCTTTCTTGTTAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATGTCTCATGCTCAATAGAAAACCGTATGTGTCTTTCTTGTTAT  846

seq1  TACCTTCTAAAAGCATTCATTGTCCAAGCTGAAAACTGAGAAGACTGGGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTCTAAAAGCATTCATTGTCCAAGCTGAAAACTGAGAAGACTGGGT  896

seq1  AGGAGATAGAAGATAGATTGTTATCATTATTACCTGTGTTTATGCAGAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATAGAAGATAGATTGTTATCATTATTACCTGTGTTTATGCAGAAA  946

seq1  TGACAGCATCTTCACAACCCACTTCCTAGCATCCATTGATTCCAGCCAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGCATCTTCACAACCCACTTCCTAGCATCCATTGATTCCAGCCAAA  996

seq1  TTTAGAGATGTCAGTCTCAGATGTGGTCAACAAAATGAATGAATTC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGATGTCAGTCTCAGATGTGGTCAACAAAATGAATGAATTC  1042


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