BAC Information

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BAC

Clone NameB6Ng01-175M02
Chromosome8 (Build37)
Map Location 51,093,777 - 51,094,932
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039866, 4930555F03Rik, LOC100039919
Downstream geneEG667495, LOC100039954, LOC100039966
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175M02.bB6Ng01-175M02.g
ACCGA003475GA003476
length1,1541,187
definitionB6Ng01-175M02.b B6Ng01-175M02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagtttaatttctagaacttgccctaagatttctgctcttatc
cagtaaactacaatgcctgatttctttcactatctctctttcaacactga
aggcatgttacacatgctaacattcttacaaaattcaaagcccaaggttg
gctcagtgattgactaggatattgggacactggtggaggccaggaagcaa
tgttcaatctaacttagctatctgtcaaatcattccttggaggcactgat
aataaaacaatactgaaagaaagcacagtaaatccttcaccgactatcac
aaggacatatctggaccacatttgtgttatgggatgccagagactctcca
agagaccactttctgtgtagctttttgtttcaggactacagccaagcttt
ttagacttgtcatgccaactccactggagtaggtgtggcagccagctaac
tcataatcctgccactatccgtctatcagaaggataaactataacctcaa
atttgaaccactaataaaatcacctctcctttttctcttttcttccttcc
tctctccctcactttttccttccctcttcttccttctttccctccctccc
attctcctctttcttttcttcatttgtttgtttttgtcagatattatatc
aaagcaatgcaaaatgtaacttatacaacagcttacataaaatttaacta
tttattgttttgcaataattagatacttcccagtttcaccaatattatat
ttccccaatgtctttaagctgttcttttgagccagtggatggctaaattt
ttttccttcaaaaacatgccaggtttcccatgatattattctcttttgtg
tacaagaaaacagaagctgtaacatgatgaaataagttatttctagtcac
gggatctgtgtgtcttcccccaagccatcgtctgttgaggaaattctaaa
atcgattcatatttgaaaactccactaacagaaaagatggttgtgcaatg
acaactacagttagattcaaatttcacattttcttttatacattaacaaa
gtaataaatactaatggtccaaaagtagctgatagaaatgttggcaataa
acaatatattagcttagaggagattccttagatgatgtagttgtatttcc
tttt
gaattctcctctgaagaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg
cttcaaggtccgccctatgcggagtccccgccctgcgtagtgcgtcagcc
ctgcgcagagagacagtgcgcagagaggcaatgcgcagacttattcattc
ccagagaggaacaaaggaaaatacaacaggcatttccagtctttgaagga
gccgagggtgggcgtgtccacgctccggtagaatacttacagattaaaga
actcgccgagtcggtccgtaaatacggaaccaatgctaattttaccttgg
tgcagttagacaggcttgccggcatggcactaactcctgccgactggcaa
acggttgtaaaagccgctctccctagtatgggcaaatatatggaatggag
agctctttggcatgaaactgcacaagcgcaggcccgagcaaacgcagctg
ctttgactccagagcagagagattggacttttgacttgttaacgggtcag
ggagcttattctgctgatcaaacaaactaccattggggagcttatgccca
agtttcctccacggctattagggcctggaaggcgctctcccgagcaggtg
aaaccactggtcaattaacaaaagttgtccagggacctcagagtccttct
cagattttgtggccagaatgacagaggcagcagagcgtatttttggagat
tcagagcaagccgcgcctctggtagaacagctaatctatgagcaagccac
aaaggagtgccgagcgggccatagccccaagaaagaacaaaggcttacaa
gactggctcagggtcttgtcgagagcttgggggacctctcaccaatgcaa
gcttagcggccgccatccttccaatctcagaaccgctccatgagcagaaa
tgatcagaggacatgttttattgcggaagcctgggcattttaagaaagat
gcagagctcagaataaacagggggggactctcactctttgctcttaagtg
tggccagggttatcatagaagcggacagtgtcgcttgtagattaagcaga
atcctccacatgaatagtcaatcagcttataggttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_51093777_51094932
seq2: B6Ng01-175M02.b_46_1199 (reverse)

seq1  -AAAAGAAATACAAACTACATCATCTTATGGTATCTCCTCTAAGCTAATT  49
       ||| ||||||| |||||||||||| || || |||||||||||||||| |
seq2  AAAAGGAAATAC-AACTACATCATC-TAAGGAATCTCCTCTAAGCTAA-T  47

seq1  ATAATTGTTTATT--CCACATTTCTTATCAGCTACTTTTGG-CCATTAGT  96
      || ||||||||||  | ||||||| |||||||||||||||| ||||||||
seq2  AT-ATTGTTTATTGCCAACATTTC-TATCAGCTACTTTTGGACCATTAGT  95

seq1  ATTTA-TACTTTGTT-ATGTATAAA--GAAATGTGAAATTTGAAATCTAA  142
      ||||| ||||||||| |||||||||   |||||||||||||| |||||||
seq2  ATTTATTACTTTGTTAATGTATAAAAGAAAATGTGAAATTTG-AATCTAA  144

seq1  ACTTGTAGTTGTTCATTGCACAACCATCTTTTCTTGTTAGTGGAGTTTTC  192
         |||||||| ||||||||||||||||||||| ||||||||||||||||
seq2  --CTGTAGTTG-TCATTGCACAACCATCTTTTC-TGTTAGTGGAGTTTTC  190

seq1  AAATATGAATCGATTTTTAGAATTTCCTCAACAGACGATGGCTTGGGGGA  242
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAATATGAATCGA-TTTTAGAATTTCCTCAACAGACGATGGCTTGGGGGA  239

seq1  AGACACACAGATCCCGTGACTAGAAATAACTTATTTCATCATGTTACAGC  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACACAGATCCCGTGACTAGAAATAACTTATTTCATCATGTTACAGC  289

seq1  TTCTGTTTTCTTGTACACAAAAGAGAATAATATCATGGGAAACCTGGCAT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTTCTTGTACACAAAAGAGAATAATATCATGGGAAACCTGGCAT  339

seq1  GTTTTTGAAGG-AAAAAATTTAGCCATCCACTGGCTCAAAAGAACAGCTT  391
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGAAGGAAAAAAATTTAGCCATCCACTGGCTCAAAAGAACAGCTT  389

seq1  AAAGACATTGGGGAAATATAATATTGGTGAAACTGGGAAGTATCTAATTA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACATTGGGGAAATATAATATTGGTGAAACTGGGAAGTATCTAATTA  439

seq1  TTGCAAAACAATAAATAGTTAAATTTTATGTAAGCTGTTGTATAAGTTAC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAAACAATAAATAGTTAAATTTTATGTAAGCTGTTGTATAAGTTAC  489

seq1  ATTTTGCATTGCTTTGATATAATATCTGACAAAAACAAACAAATGAAGAA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCATTGCTTTGATATAATATCTGACAAAAACAAACAAATGAAGAA  539

seq1  AAGAAAGAGGAGAATGGGAGGGAGGGAAAGAAGGAAGAAGAGGGAAGGAA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAGGAGAATGGGAGGGAGGGAAAGAAGGAAGAAGAGGGAAGGAA  589

seq1  AAAGTGAGGGAGAGAGGAAGGAAGAAAAGAGAAAAAGGAGAGGTGATTTT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGAGGGAGAGAGGAAGGAAGAAAAGAGAAAAAGGAGAGGTGATTTT  639

seq1  ATTAGTGGTTCAAATTTGAGGTTATAGTTTATCCTTCTGATAGACGGATA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTGGTTCAAATTTGAGGTTATAGTTTATCCTTCTGATAGACGGATA  689

seq1  GTGGCAGGATTATGAGTTAGCTGGCTGCCACACCTACTCCAGTGGAGTTG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAGGATTATGAGTTAGCTGGCTGCCACACCTACTCCAGTGGAGTTG  739

seq1  GCATGACAAGTCTAAAAAGCTTGGCTGTAGTCCTGAAACAAAAAGCTACA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGACAAGTCTAAAAAGCTTGGCTGTAGTCCTGAAACAAAAAGCTACA  789

seq1  CAGAAAGTGGTCTCTTGGAGAGTCTCTGGCATCCCATAACACAAATGTGG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGTGGTCTCTTGGAGAGTCTCTGGCATCCCATAACACAAATGTGG  839

seq1  TCCAGATATGTCCTTGTGATAGTCGGTGAAGGATTTACTGTGCTTTCTTT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGATATGTCCTTGTGATAGTCGGTGAAGGATTTACTGTGCTTTCTTT  889

seq1  CAGTATTGTTTTATTATCAGTGCCTCCAAGGAATGATTTGACAGATAGCT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATTGTTTTATTATCAGTGCCTCCAAGGAATGATTTGACAGATAGCT  939

seq1  AAGTTAGATTGAACATTGCTTCCTGGCCTCCACCAGTGTCCCAATATCCT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAGATTGAACATTGCTTCCTGGCCTCCACCAGTGTCCCAATATCCT  989

seq1  AGTCAATCACTGAGCCAACCTTGGGCTTTGAATTTTGTAAGAATGTTAGC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATCACTGAGCCAACCTTGGGCTTTGAATTTTGTAAGAATGTTAGC  1039

seq1  ATGTGTAACATGCCTTCAGTGTTGAAAGAGAGATAGTGAAAGAAATCAGG  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTAACATGCCTTCAGTGTTGAAAGAGAGATAGTGAAAGAAATCAGG  1089

seq1  CATTGTAGTTTACTGGATAAGAGCAGAAATCTTAGGGCAAGTTCTAGAAA  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTAGTTTACTGGATAAGAGCAGAAATCTTAGGGCAAGTTCTAGAAA  1139

seq1  TTAAACTTGGAATTC  1156
      |||||||||||||||
seq2  TTAAACTTGGAATTC  1154