BAC Information

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BAC

Clone NameB6Ng01-176A24
Chromosome8 (Build37)
Map Location 104,925,038 - 104,926,066
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneCdh11, EG667618, LOC100041368, 1600027J07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-176A24.bB6Ng01-176A24.g
ACCGA003702GA003703
length1,008371
definitionB6Ng01-176A24.b B6Ng01-176A24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgataacatgattttgtaatgtatagttatcatggggatagta
gcttgaaaatgtccccactgatgctgttatggttatggtaccagtaatat
ttttaagactgaataaaagtacctgtatttcttattttcccaataataca
cagagttcctaaagaaggaatgaaacactttttttttttaatgttctggt
agttttcacattttgaatagtacataatagtaataaattttctaaagtca
tggttgaattggattgagcaatgtatacagaaaactgaaaacaagtcata
cacttggtatatttggtgttcgaatttccagtgtttttttattgcagact
ttcctttagatattatctcaatctttcaaaaataacatttatctttagaa
agtactaagttacagataatcaaacgcttgcaaataagatataagtcttg
tattttgaagaattttcttacctcaattttctcatataattttatggtca
aggtttcttatctaagccagagctaagagcatattaaactgagattattc
ataggtattttgaattccatttgacattctgaattctgatgatttctact
ctatctggaacaacttttttttctttaaaaagtaaaataaatacagtaac
agaataaaaatgaatagtgagtatctaaaactaataattgtggtctctaa
gatatccattgtgctacaacagttggacatttcttaaatttttgtctcta
gaaatttaaagtacaatgttgcacccaaacccagtgattgcatctctgca
gcagagcatctcatttctagatgctggtgaaactttagccaattacaata
tcaaagaagctacaataggaagcctggctctggaaactgaatggcaaaat
gtgtgacagttcacatttcatatatatatatatatatatatatatatttt
aaacatggccatagacatatgtctccccaatcctccacagacatagtagt
tgttgtgt

atcacaaggtgtactgaatacatacatattcatgtttccttaagccagag
aaatgtttcaaatgcagtagacccaacaagaaatggttgatgatttgatt
gacaaatattatttaaatgtgtactgtgtgtcaggtattggatggatcac
agggctcccaatggaggagctagagaaagtacccaaggatggaataacat
tatgaactaaccagtaccccggaactcttgactctagctgcatatgtatc
aaaagatggcctagtcggccatcactggaaagagaggcccattggacaca
caaactttatatgccccagtacaggggaacgccagggccaaaaaatggga
atgggtgggtagggaagtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_104925038_104926066
seq2: B6Ng01-176A24.b_45_1052

seq1  GAATTCTTGATAACATGATTTTGTAATGTATAGTTATCATGGGGATAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGATAACATGATTTTGTAATGTATAGTTATCATGGGGATAGTA  50

seq1  GCTTGAAAATGTCCCCACTGATGCTGTTATGGTTATGGTACCAGTAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGAAAATGTCCCCACTGATGCTGTTATGGTTATGGTACCAGTAATAT  100

seq1  TTTTAAGACTGAATAAAAGTACCTGTATTTCTTATTTTCCCAATAATACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGACTGAATAAAAGTACCTGTATTTCTTATTTTCCCAATAATACA  150

seq1  CAGAGTTCCTAAAGAAGGAATGAAACACTTTTTTTTTTTAATGTTCTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTCCTAAAGAAGGAATGAAACACTTTTTTTTTTTAATGTTCTGGT  200

seq1  AGTTTTCACATTTTGAATAGTACATAATAGTAATAAATTTTCTAAAGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCACATTTTGAATAGTACATAATAGTAATAAATTTTCTAAAGTCA  250

seq1  TGGTTGAATTGGATTGAGCAATGTATACAGAAAACTGAAAACAAGTCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGAATTGGATTGAGCAATGTATACAGAAAACTGAAAACAAGTCATA  300

seq1  CACTTGGTATATTTGGTGTTCGAATTTCCAGTGTTTTTTTATTGCAGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGGTATATTTGGTGTTCGAATTTCCAGTGTTTTTTTATTGCAGACT  350

seq1  TTCCTTTAGATATTATCTCAATCTTTCAAAAATAACATTTATCTTTAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTAGATATTATCTCAATCTTTCAAAAATAACATTTATCTTTAGAA  400

seq1  AGTACTAAGTTACAGATAATCAAACGCTTGCAAATAAGATATAAGTCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTAAGTTACAGATAATCAAACGCTTGCAAATAAGATATAAGTCTTG  450

seq1  TATTTTGAAGAATTTTCTTACCTCAATTTTCTCATATAATTTTATGGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGAAGAATTTTCTTACCTCAATTTTCTCATATAATTTTATGGTCA  500

seq1  AGGTTTCTTATCTAAGCCAGAGCTAAGAGCATATTAAACTGAGATTATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCTTATCTAAGCCAGAGCTAAGAGCATATTAAACTGAGATTATTC  550

seq1  ATAGGTATTTTGAATTCCATTTGACATTCTGAATTCTGATGATTTCTACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTATTTTGAATTCCATTTGACATTCTGAATTCTGATGATTTCTACT  600

seq1  CTATCTGGAACAACTTTTTTTTCTTTAAAAAGTAAAATAAATACAGTAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGGAACAACTTTTTTTTCTTTAAAAAGTAAAATAAATACAGTAAC  650

seq1  AGAATAAAAATGAATAGTGAGTATCTAAAACTAATAATTGTGGTCTCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAAAAATGAATAGTGAGTATCTAAAACTAATAATTGTGGTCTCTAA  700

seq1  GATATCCATTGTGCTACAACAGTTGGACATTTCTTAAATTTTTGTCTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCCATTGTGCTACAACAGTTGGACATTTCTTAAATTTTTGTCTCTA  750

seq1  GAAATTTAAAGTACAATGTTGCACCCAAACCCAGTGATTGCATCTCTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTAAAGTACAATGTTGCACCCAAACCCAGTGATTGCATCTCTGCA  800

seq1  GCAGAGCATCTCATTTCTAGATGCTGGTGAAACTTTAGCCAATTACAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGCATCTCATTTCTAGATGCTGGTGAAACTTTAGCCAATTACAATA  850

seq1  TCAAAGAAGCTACAATAGGAAGCCTGGCTCTGGAAACTGAATGGCAAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAAGCTACAATAGGAAGCCTGGCTCTGGAAACTGAATGGCAAAAT  900

seq1  GTGTGACAGTTCACAATTTCAATAATAATAATAATAATAATAATAATAAT  950
      |||||||||||||| |||||             |||   |||   |||  
seq2  GTGTGACAGTTCAC-ATTTC-------------ATA--TATATATATATA  934

seq1  AATAATAATAATTTTAAAACATGGCCATAGGACATATGTCTCCCCCAATC  1000
       |||   |||  ||| ||||||||||||| ||||||||||| ||||||||
seq2  TATATATATATATTTTAAACATGGCCATA-GACATATGTCT-CCCCAATC  982

seq1  CTCCACAAGACATAGTAGGTTGTTTGTGT  1029
      |||||| |||||||||| |||| ||||||
seq2  CTCCAC-AGACATAGTA-GTTG-TTGTGT  1008


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