BAC Information

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BAC

Clone NameB6Ng01-176G19
Chromosome8 (Build37)
Map Location 66,157,844 - 66,158,992
singlet/doubletsinglet
Overlap genenone
Upstream geneSpock3
Downstream geneLOC384831, EG244495, Tll1, LOC100040989, Cpe
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-176G19.bB6Ng01-176G19.g
ACCGA003961GA003962
length1,1431,149
definitionB6Ng01-176G19.b B6Ng01-176G19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctctaagagccaaaagtaggtgctaggtatagtgtggtactatt
agggagtggctaggatatttagacattggtgtggtaattggcaaacagta
tagttaaatgggtggctaatgtgtaaagatgaattaaatgttagaaaata
cctcattgtgtgatcaaataattttctacagataaataagtccacagtaa
attatctttgatataactattatcaacaaatttatatatcataagaaaaa
atatgcataccactgaaagtacagacataagtgaatacaaatatctgatc
ttaatttcagtcagtgaagtcctagaatattataaaatcataaaataaaa
tatatgtggtcagataaatgacacgactctccagatgctgaagggaaaac
ttataagcaatttctaccacaaaactttaaggaaatgaaaaatgtattac
tggaggaagccatgcagtctctcgtgtagatatgtgcagatctgcaaatg
cagatctcagggctttttctcagttgcactgactctttaaaaggtctctt
gacctcccagtagatggctgcatataccaatcggcaaatcgagcacttta
ttcaggacattattaacaacagcataaaagaaggacaaggatgtgggagg
aaatcagaatagaatattccaggagtgttgggaggaaaatgttaaaaaat
gagccagctcattcctgtgcttatgccagcaatgcactagtgggcactcc
ttgtcaatggtcgatctgtttttatctcctggagactgactcagaactcc
acaatctctccacccagctcactaggtttccactggcaggtcactaccat
gccatccccatgcttcaaatcctccaaagcctttgtggtgcacatcagca
aactcacagtttgctgccaatgccttttttttttcttgaactcagaggag
ccaccttgtgaaggaaaacaaaacaagaaacttagttcagaaacaatggt
aactcaatcctctgggtgcaacaacaaaaaacctagtcttccaagctact
aaatggatacctctgatgttaaattcctgtgggatctgctatgatactgg
ggactccagcagcacatctacttatgttgtcctcttccaaagg

gaattcaagtactatattgaatatgtagagagaaagtgggcagccttgtc
tagtccctgattttagtgggattccttcgagtttctctccatttagtttg
atgttggctactggtttgctgtagattgcatttattacgtttgggtatgg
gccttgaaatcctgatctttccaagacttttatcatgaaggggtgttaga
ttttatcaaatgctttctcagcatctaacgagatgatcatgaggtttttg
tctttgagtttgtttatatagtggattatgttgatggatttccgtatatt
aaaccatccctgcatccctgggatgaagcctacttgatcatgatggatgg
tcgttttgatgtgttcttggattcagtttaccaggattttaagaagtatt
tttgcatcgatattcataagggaaattggtctgaagttctttttctttgt
tggacctttgtttcatttaggtatcagagtaattgtggcttcatagaatg
aattaggtagagtaccttctgtttctattttgtggaattctttgaggaga
gttggaattaggtcttctttgatggtctgatagaactctgcactaaaccc
atctggtcctgggctttttttggttgggagatgtttgatgactgcttcta
tttctttaggggaaatgggactgtttagattgttattctgatcctgcttt
aactttggtatctggtatctgtctaggaatttgtccatttcatccaggtc
ttctagttttgttgagtatagccttttgtagtaggatctgatgatgtttt
agatttcctaaggttctgtttttatgttgcctttttcattactcattttg
ttaattagggtactgtccctatgccctctagttagtctggctaagggttt
atctatcttgttgattttctcaaataaccagttcctggtttgctttgttt
ctttaaatagttctttttgtttccagttggtagattcagcctgagttgga
attatttccttgcctctactcctcttgggtgaatttggctttataaggtt
ctaggctgtcagaactgctggttatgcctttctcagctttctttcgaaga
ctatgcctatgagattctctttaggagacggtcctttcacaatgttgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_66157844_66158992
seq2: B6Ng01-176G19.b_44_1186 (reverse)

seq1  CCTTTGAAAGAGGGACAACATAAGGGTGAGATGTTGCTGCTGGAGTTCCC  50
      |||||| |||| ||||||||||||    ||||| ||||||||||| ||||
seq2  CCTTTGGAAGA-GGACAACATAAG---TAGATG-TGCTGCTGGAG-TCCC  44

seq1  CAGTATCATAGCAGAT-CCACAGG-ATTTAACATCAGAGGTATCCAATTT  98
      |||||||||||||||| ||||||| |||||||||||||||||||||  ||
seq2  CAGTATCATAGCAGATCCCACAGGAATTTAACATCAGAGGTATCCA--TT  92

seq1  TAGTAAGGCTTGGAAGACTAGGTTTTTTGTTGTTGCACCCAGA-GATTGA  147
      |||||  |||||||||||||||||||||||||||||||||||| ||||||
seq2  TAGTA--GCTTGGAAGACTAGGTTTTTTGTTGTTGCACCCAGAGGATTGA  140

seq1  GTTACCATTGTTTCTGAACTAAGTTTC-TGTTTTGTTTTCCTTCACAAGG  196
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GTTACCATTGTTTCTGAACTAAGTTTCTTGTTTTGTTTTCCTTCACAAGG  190

seq1  TGGCTCCTCTGAGTTCAAG-AAAAAAAAAGGCATTGGCAGCAAACTGTGA  245
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGGCTCCTCTGAGTTCAAGAAAAAAAAAAGGCATTGGCAGCAAACTGTGA  240

seq1  GTTTGCCTGATGTGCACCACAAAGGCTTTGGAGGATTTGAAGCATGGGGA  295
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTG-CTGATGTGCACCACAAAGGCTTTGGAGGATTTGAAGCATGGGGA  289

seq1  TGGCATGGTAGTGACCTGCCAGTGGAAACCTAGTGAGCTGGGTGGAGAGA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATGGTAGTGACCTGCCAGTGGAAACCTAGTGAGCTGGGTGGAGAGA  339

seq1  TTGTGGAGTTCTGAGTCAGTCTCCAGGAGATAAAAACAGATCGACCATTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGAGTTCTGAGTCAGTCTCCAGGAGATAAAAACAGATCGACCATTG  389

seq1  ACAAGGAGTGCCCACTAGTGCATTGCTGGCATAAGCACAGGAATGAGCTG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAGTGCCCACTAGTGCATTGCTGGCATAAGCACAGGAATGAGCTG  439

seq1  GCTCATTTTTTAACATTTTCCTCCCAACACTCCTGGAATATTCTATTCTG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATTTTTTAACATTTTCCTCCCAACACTCCTGGAATATTCTATTCTG  489

seq1  ATTTCCTCCCACATCCTTGTCCTTCTTTTATGCTGTTGTTAATAATGTCC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTCCCACATCCTTGTCCTTCTTTTATGCTGTTGTTAATAATGTCC  539

seq1  TGAATAAAGTGCTCGATTTGCCGATTGGTATATGCAGCCATCTACTGGGA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAAGTGCTCGATTTGCCGATTGGTATATGCAGCCATCTACTGGGA  589

seq1  GGTCAAGAGACCTTTTAAAGAGTCAGTGCAACTGAGAAAAAGCCCTGAGA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAGAGACCTTTTAAAGAGTCAGTGCAACTGAGAAAAAGCCCTGAGA  639

seq1  TCTGCATTTGCAGATCTGCACATATCTACACGAGAGACTGCATGGCTTCC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATTTGCAGATCTGCACATATCTACACGAGAGACTGCATGGCTTCC  689

seq1  TCCAGTAATACATTTTTCATTTCCTTAAAGTTTTGTGGTAGAAATTGCTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTAATACATTTTTCATTTCCTTAAAGTTTTGTGGTAGAAATTGCTT  739

seq1  ATAAGTTTTCCCTTCAGCATCTGGAGAGTCGTGTCATTTATCTGACCACA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTTTTCCCTTCAGCATCTGGAGAGTCGTGTCATTTATCTGACCACA  789

seq1  TATATTTTATTTTATGATTTTATAATATTCTAGGACTTCACTGACTGAAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTATTTTATGATTTTATAATATTCTAGGACTTCACTGACTGAAA  839

seq1  TTAAGATCAGATATTTGTATTCACTTATGTCTGTACTTTCAGTGGTATGC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGATCAGATATTTGTATTCACTTATGTCTGTACTTTCAGTGGTATGC  889

seq1  ATATTTTTTCTTATGATATATAAATTTGTTGATAATAGTTATATCAAAGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTTCTTATGATATATAAATTTGTTGATAATAGTTATATCAAAGA  939

seq1  TAATTTACTGTGGACTTATTTATCTGTAGAAAATTATTTGATCACACAAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTACTGTGGACTTATTTATCTGTAGAAAATTATTTGATCACACAAT  989

seq1  GAGGTATTTTCTAACATTTAATTCATCTTTACACATTAGCCACCCATTTA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTATTTTCTAACATTTAATTCATCTTTACACATTAGCCACCCATTTA  1039

seq1  ACTATACTGTTTGCCAATTACCACACCAATGTCTAAATATCCTAGCCACT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATACTGTTTGCCAATTACCACACCAATGTCTAAATATCCTAGCCACT  1089

seq1  CCCTAATAGTACCACACTATACCTAGCACCTACTTTTGGCTCTTAGAGGA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAATAGTACCACACTATACCTAGCACCTACTTTTGGCTCTTAGAGGA  1139

seq1  ATTC  1149
      ||||
seq2  ATTC  1143


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