BAC Information

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BAC

Clone NameB6Ng01-178E03
Chromosome8 (Build37)
Map Location 103,689,804 - 103,690,806
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042078, LOC100042086, LOC100042092, LOC384895
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-178E03.bB6Ng01-178E03.g
ACCGA005301GA005302
length1,0011,008
definitionB6Ng01-178E03.b B6Ng01-178E03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttcagtgtctttcatgcaggccattattgataactcaga
taatctatcaactaattttatgtaaacttgacacacaaaccagagttatg
agaaaattcctccatgagatcatgctgtaaagcagattcttaattagtca
ttaatgggggaagtgcaatccctgagcagatggtccttggttctataaga
aagcaggttgagcaatccactagaccagtaagcagcactcttacatggtg
tctgcaccagctcctgcttgcaggtttctgtcctgtttgggattctgtcc
tgacgaacagtgatacaatgatgaacagtgatacagaagtataagccaaa
aaaaaaaaatcataaaacctttcctctccaagttgctttgttaggtgtct
catcacagccatagtgtgatacatgtctacatgtgtacgtgtgtattgca
ctgtgtgctattgcctttttctcaaacttttactttctcctaccttagtt
ttcccttttgttaattcttctaccattttcactaaagttcaggcttacta
agtatttttattgttgttgttttatttgccccatttgttgtttttgtttg
ttttttgttttgttttttggggttgttttgttttgttttgttttgcttta
ggcaacatctctttatgtatcccttgctgtcctggatcttacagtgtaga
ctaggctgtcctcaagatcacacctgtctctgcctccaaactgttgaaat
taaaggtatgcacaattatgcccagctggttcccaagtactttaatctgt
gtgcttactttctgttttctaagggtttttatatgtaccaagttgcttat
ggatttcccatgttgaattctacttcaatatcagtggattcttgacctct
cattcaataaattactcaagtcttttattactattttccttggaatagta
tttaactcattttatttatacactgtttatgtgagtaccttatgtcaaac
t

gaattcagtttgtgagaattttgttgagttcttttgtacccatattcata
gggcaaattggtctgaagtctactttttttgttgggtctttgtgtggttt
agttatcagagtaattgtggctttatagaatgaattgggtagagtacctt
ctgtttctattttgtggaatagcttgagttgttctggtattaggtcttct
ttgaaggtcttctttggagatggaactctgcatgaaacccatctggtcct
gggctttttggatgggagactattaatgagtgtttctatttctttagggt
atatgggactgtttatatcattaatctgatcctgatttaactttggcaac
tggtggctgtctaggaagttgtccatttcttccaagttctccagtttttt
tacttgtagatttctgttgtaggatctgatgatttttaggattctctcag
attctgttgttatgtctcccttttcattttggttttggtgaatactgtct
ctgtgccctctagttattttggctaagggtttatctcttttgtagatttt
tatcaaagaaccagctcctggtttggttgttttttgtatagttctttttg
tttttacttgtttgatttcagcctagagtgattatttcctgccctctact
cctcttgggtgattttgcttccttttgttctagagcttataggtgtgctg
tcaggctgctagtgtaatgctctctccaatttctttttggaggcactcag
agctatgagtttttcctcttaggactgcattcattgtgtcccatgaattt
gggtgtgttgtggcttcattttcattaaactctaaaaagcctttaatttc
tttctttatttcatttcttgagcaaggaattattgagtagagtgtttttt
cagatttccacatgtgtgtggctttctattatttatgttgttattgaaga
tcaagccttagaccaggtgactttataggatgcagggaataattgcacct
cctggatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_103689804_103690806
seq2: B6Ng01-178E03.b_45_1045

seq1  GAATTCTTTGTTTCAGTGTCTTTCATGCAGGCCATTATTGATAACTCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTCAGTGTCTTTCATGCAGGCCATTATTGATAACTCAGA  50

seq1  TAATCTATCAACTAATTTTATGTAAACTTGACACACAAACCAGAGTTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTATCAACTAATTTTATGTAAACTTGACACACAAACCAGAGTTATG  100

seq1  AGAAAATTCCTCCATGAGATCATGCTGTAAAGCAGATTCTTAATTAGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTCCTCCATGAGATCATGCTGTAAAGCAGATTCTTAATTAGTCA  150

seq1  TTAATGGGGGAAGTGCAATCCCTGAGCAGATGGTCCTTGGTTCTATAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGGGGGAAGTGCAATCCCTGAGCAGATGGTCCTTGGTTCTATAAGA  200

seq1  AAGCAGGTTGAGCAATCCACTAGACCAGTAAGCAGCACTCTTACATGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGTTGAGCAATCCACTAGACCAGTAAGCAGCACTCTTACATGGTG  250

seq1  TCTGCACCAGCTCCTGCTTGCAGGTTTCTGTCCTGTTTGGGATTCTGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACCAGCTCCTGCTTGCAGGTTTCTGTCCTGTTTGGGATTCTGTCC  300

seq1  TGACGAACAGTGATACAATGATGAACAGTGATACAGAAGTATAAGCCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGAACAGTGATACAATGATGAACAGTGATACAGAAGTATAAGCCAAA  350

seq1  AAAAAAAAATCATAAAACCTTTCCTCTCCAAGTTGCTTTGTTAGGTGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAATCATAAAACCTTTCCTCTCCAAGTTGCTTTGTTAGGTGTCT  400

seq1  CATCACAGCCATAGTGTGATACATGTCTACATGTGTACGTGTGTATTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACAGCCATAGTGTGATACATGTCTACATGTGTACGTGTGTATTGCA  450

seq1  CTGTGTGCTATTGCCTTTTTCTCAAACTTTTACTTTCTCCTACCTTAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGCTATTGCCTTTTTCTCAAACTTTTACTTTCTCCTACCTTAGTT  500

seq1  TTCCCTTTTGTTAATTCTTCTACCATTTTCACTAAAGTTCAGGCTTACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTTTGTTAATTCTTCTACCATTTTCACTAAAGTTCAGGCTTACTA  550

seq1  AGTATTTTTATTGTTGTTGTTTTATTTGCCCCATTTGTTGTTTTTGTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTTTATTGTTGTTGTTTTATTTGCCCCATTTGTTGTTTTTGTTTG  600

seq1  TTTTTTGTTTTGTTTTTTGGGGTTGTTTTGTTTTGTTTTGTTTTGCTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTTTTGTTTTTTGGGGTTGTTTTGTTTTGTTTTGTTTTGCTTTA  650

seq1  GGCAACATCTCTTTATGTATCCCTTGCTGTCCTGGATCTTACAGTGTAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACATCTCTTTATGTATCCCTTGCTGTCCTGGATCTTACAGTGTAGA  700

seq1  CTAGGCTGTCCTCAAGATCACACCTGTCTCTGCCTCCAAACTGTTGAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCTGTCCTCAAGATCACACCTGTCTCTGCCTCCAAACTGTTGAAAT  750

seq1  TAAAGGTATGCACAATTATGCCCAGCTGGTTCCCAAGTACTTTAATCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTATGCACAATTATGCCCAGCTGGTTCCCAAGTACTTTAATCTGT  800

seq1  GTGCTTACTTTCTGTTTTCTAA-GGTTTTTATATGTACCAAGTTGCTTTA  849
      |||||||||||||||||||||| ||||||||||||||||||||||| |||
seq2  GTGCTTACTTTCTGTTTTCTAAGGGTTTTTATATGTACCAAGTTGC-TTA  849

seq1  TGGATTTCCCATGTTGAATTCTACTTCAATATCAGTTGGATTCTTGACCT  899
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGGATTTCCCATGTTGAATTCTACTTCAATATCAG-TGGATTCTTGACCT  898

seq1  CTCATTCAATAAATTACTCAAGTCTTTTATTACTATTTTCCTTGGAATAA  949
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTCATTCAATAAATTACTCAAGTCTTTTATTACTATTTTCCTTGGAAT-A  947

seq1  GTATTTAACTCATTTTATTTATACAACTGTTTATGTGAGTACC-TATGTC  998
      |||||||||||||||||||||||| |||||||||||||||||| ||||||
seq2  GTATTTAACTCATTTTATTTATAC-ACTGTTTATGTGAGTACCTTATGTC  996

seq1  AAACT  1003
      |||||
seq2  AAACT  1001


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