BAC Information

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BAC

Clone NameB6Ng01-179N15
Chromosome8 (Build37)
Map Location 10,405,797 - 10,594,336
singlet/doubletdoublet
Overlap geneMyo16
Upstream geneTmem28, Lig4, Abhd13, Tnfsf13b
Downstream geneLOC100040008, LOC384782, LOC100040507, LOC665306, Irs2, Col4a1, Col4a2, Rab20, 0710008K08Rik, Cars2, Ing1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-179N15.bB6Ng01-179N15.g
ACCGA006456GA006457
length761772
definitionB6Ng01-179N15.b B6Ng01-179N15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,593,581 - 10,594,336)(10,405,797 - 10,406,563)
sequence
gaattcttaggggggcaccgtaatgtttctcaccaaggggcctgagatgt
atgaaaacagaagccattgttcagtcctaagggggaaaggggcgctttga
aagctgtgtagagtcaatcaagcgagatttgacaagcacaagagcatagg
acggtgtggctcttcacagactcctgtgtctgctgccagtgtggctccgt
attgcatttctccacatcacctgacacctgactcagtttccctctgatgc
atgcaggtgcacccagcatgaattcttgctttcctaggatccccagtgct
cctataaccctcaggaaatgcttcaatctacctctgagtgtgctgtgagt
ttttctctcttgtcagtgcttagcgaatcctaactgtcctcgaagtggag
cctttctaaggtttgatgctaacacagtattaaataagggatgatatctt
agtcagggtttctattcctgcacaaacatcatgaccaagaagcaagttga
gggggaaagggtttattcagcttacacttccatactgctgtttcatcacc
aaggacgtcaggactggaactcaagcaggtcaggaagcaggagctgacac
agaggccatggagggatgttcttttactggcttgctcagcctgctctctt
taagactaccagcccagagatggtcccacccacaacgggcctttccccct
tgatcactaattgagaaaaatgcctttacagttggatctcatggaggcat
ttcctcaactg
gaattcactcgccaccatttttggatttataaacctcttattcgtaccct
agaactgtcttataataacgatgaccaggtgtgcccagaggagcctgggc
tgccttgtgcatcctgaggcgtcaggtttcaagttcagacttcactggga
atcaaaaatattctcaagtgcgaggtgagcctccccaggaggagtgctgt
ataaagcacacaacacagaaagaaggacttatcaaaaaagacaaacaaac
aaacacctgacaggagtagtcctcccacaaaaatgcaaaccctcaaacaa
attatagccacgtgcagttccttcacatggcgcccagtgagatctgttta
aatcaaatctgattttttttaaatgattgaattacaaccaatctaaacat
taaagcaaccaccaaactaaactgaaacagaatcggtttcttatttgctt
taaatattagctgtgtatttttttttctggaaactcatttacaattcaag
attttactgaccagtagcaggttctgggcacagtctaagattcctaggtg
agaaattcccagagaccagacaggaaaggttgtgactgtcctttgccaca
tggctgtgcagacccaggtgacgcctgtggtcaggtttaaactggcagtc
tgtgagcagtgtggcgtcccaaagtcactcactggccacttgcttgctcc
actgtgtggcaggacattcttgtgggggagcctcagagtcactgatgttt
gagagcattagctcctactaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_10593581_10594336
seq2: B6Ng01-179N15.b_45_805 (reverse)

seq1  CAGTTGAGGAAATGCCTCCATGAGATCCAACTGT-AAGGCA-TTTTCTCA  48
      |||||||||||||||||||||||||||||||||| |||||| ||||||||
seq2  CAGTTGAGGAAATGCCTCCATGAGATCCAACTGTAAAGGCATTTTTCTCA  50

seq1  ATTAGTGATCAAGGGGGAAAGGCCCGTTGTGGGTGGGACCATCTCTGGGC  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTGATCAAGGGGGAAAGGCCCGTTGTGGGTGGGACCATCTCTGGGC  100

seq1  TGGTAGTCTT-AAGAGAGCAGGCTGAGCAAGCCAGT-AAAGAACATCCCT  146
      |||||||||| ||||||||||||||||||||||||| |||||||||||||
seq2  TGGTAGTCTTAAAGAGAGCAGGCTGAGCAAGCCAGTAAAAGAACATCCCT  150

seq1  CCATGGCCTCTGTGTCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGCCTCTGTGTCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTC  200

seq1  CTGACGTCCTTGGTGATG-AACAGCAGTATGGAAGTGTAAGCTGAATAAA  245
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTGACGTCCTTGGTGATGAAACAGCAGTATGGAAGTGTAAGCTGAATAAA  250

seq1  CCCTTTCCCCCTCAACTTGCTTCTTGGTCATGATGTTTGTGCAGGAATAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCCCCCTCAACTTGCTTCTTGGTCATGATGTTTGTGCAGGAATAG  300

seq1  AAACCCTGACTAAGATATCATCCCTTATTTAATACTGTGTTAGCATCAAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTGACTAAGATATCATCCCTTATTTAATACTGTGTTAGCATCAAA  350

seq1  CCTTAGAAAGGCTCCACTTCGAGGACAGTTAGGATTCGCTAAGCACTGAC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGAAAGGCTCCACTTCGAGGACAGTTAGGATTCGCTAAGCACTGAC  400

seq1  AAGAGAGAAAAACTCACAGCACACTCAGAGGTAGATTGAAGCATTTCCTG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGAAAAACTCACAGCACACTCAGAGGTAGATTGAAGCATTTCCTG  450

seq1  AGGGTTATAGGAGCACTGGGGATCCTAGGAAAGCAAGAATTCATGCTGGG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTATAGGAGCACTGGGGATCCTAGGAAAGCAAGAATTCATGCTGGG  500

seq1  TGCACCTGCATGCATCAGAGGGAAACTGAGTCAGGTGTCAGGTGATGTGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCTGCATGCATCAGAGGGAAACTGAGTCAGGTGTCAGGTGATGTGG  550

seq1  AGAAATGCAATACGGAGCCACACTGGCAGCAGACACAGGAGTCTGTGAAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGCAATACGGAGCCACACTGGCAGCAGACACAGGAGTCTGTGAAG  600

seq1  AGCCACACCGTCCTATGCTCTTGTGCTTGTCAAATCTCGCTTGATTGACT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACACCGTCCTATGCTCTTGTGCTTGTCAAATCTCGCTTGATTGACT  650

seq1  CTACACAGCTTTCAAAGCGCCCCTTTCCCCCTTAGGACTGAACAATGGCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACAGCTTTCAAAGCGCCCCTTTCCCCCTTAGGACTGAACAATGGCT  700

seq1  TCTGTTTTCATACATCTCAGGCCCCTTGGTGAGAAACATTACGGTGCCCC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTTCATACATCTCAGGCCCCTTGGTGAGAAACATTACGGTGCCCC  750

seq1  CCTAAGAATTC  756
      |||||||||||
seq2  CCTAAGAATTC  761

seq1: chr8_10405797_10406563
seq2: B6Ng01-179N15.g_71_842

seq1  GAATTCACTCGCCACCACTTATGGATTTATAAACCTCTTATTCGTACCCT  50
      ||||||||||||||||| || |||||||||||||||||||||||||||||
seq2  GAATTCACTCGCCACCATTTTTGGATTTATAAACCTCTTATTCGTACCCT  50

seq1  AGAACTGTCTTATAATAACGATGACCAGGTGTGCCCAGAGGAGCCTGGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGTCTTATAATAACGATGACCAGGTGTGCCCAGAGGAGCCTGGGC  100

seq1  TGCCTTGTGCATCCTGAGGCGTCAGGTTTCAAGTTCAGACTTCACTGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTGTGCATCCTGAGGCGTCAGGTTTCAAGTTCAGACTTCACTGGGA  150

seq1  ATCAAAAATATTCTCAAGTGCGAGGTGAGCCTCCCCAGGAGGAGTGCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAAATATTCTCAAGTGCGAGGTGAGCCTCCCCAGGAGGAGTGCTGT  200

seq1  ATAAAGCACACAACACAGAAAGAAGGACTTATCAAAAAAGACAAACAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGCACACAACACAGAAAGAAGGACTTATCAAAAAAGACAAACAAAC  250

seq1  AAACACCTGACAGGAGTAGTCCTCCCACAAAAATGCAAACCCTCAAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCTGACAGGAGTAGTCCTCCCACAAAAATGCAAACCCTCAAACAA  300

seq1  ATTATAGCCACGTGCAGTTCCTTCACATGGCGCCCAGTGAGATCTGTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGCCACGTGCAGTTCCTTCACATGGCGCCCAGTGAGATCTGTTTA  350

seq1  AATCAAATCTGATTTTTTTTAAATGATTGAATTACAACCAATCTAAACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAATCTGATTTTTTTTAAATGATTGAATTACAACCAATCTAAACAT  400

seq1  TAAAGCAACCACCAAACTAAACTGAAACAGAATCGGTTTCTTATTTGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCAACCACCAAACTAAACTGAAACAGAATCGGTTTCTTATTTGCTT  450

seq1  TAAATATTAGCTGTGTATTTTTTTTTCTGGAAACTCATTTACAATTCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTAGCTGTGTATTTTTTTTTCTGGAAACTCATTTACAATTCAAG  500

seq1  ATTTTACTGACCAGTAGCAGGTTCTGGGCACAGTCTAAGATTCCTAGGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACTGACCAGTAGCAGGTTCTGGGCACAGTCTAAGATTCCTAGGTG  550

seq1  AGAAATTCCCAGAGACCAGACAGGAAAGGTTGTGACTGTCCTTTGCCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTCCCAGAGACCAGACAGGAAAGGTTGTGACTGTCCTTTGCCACA  600

seq1  TGGCTGTGCAGACCCAGGTGACGCCTGTGGTCAGG-TTAAACTGGCAGTC  649
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGGCTGTGCAGACCCAGGTGACGCCTGTGGTCAGGTTTAAACTGGCAGTC  650

seq1  TGTGAGCAGTGTGGCGTCCC-AAGTCACTCACTGGCCACTTGCTTGCTCC  698
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGTGAGCAGTGTGGCGTCCCAAAGTCACTCACTGGCCACTTGCTTGCTCC  700

seq1  ACTGTGTGGCAGGACATTC-TGT-GGGGAGCCTCAGAGTCACTGATGTTT  746
      ||||||||||||||||||| ||| ||||||||||||||||||||||||||
seq2  ACTGTGTGGCAGGACATTCTTGTGGGGGAGCCTCAGAGTCACTGATGTTT  750

seq1  GAGAGCA-TAGCTCCTACTAAG  767
      ||||||| ||||||||||||||
seq2  GAGAGCATTAGCTCCTACTAAG  772