BAC Information

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BAC

Clone NameB6Ng01-180G14
Chromosome8 (Build37)
Map Location 120,621,276 - 120,622,481
singlet/doubletsinglet
Overlap genenone
Upstream geneBcmo1, Gan, 4933407C03Rik, Plcg2, 4632417N05Rik, Hsd17b2, Mphosph6
Downstream geneCdh13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-180G14.bB6Ng01-180G14.g
ACCGA006850GA006851
length1,2011,205
definitionB6Ng01-180G14.b B6Ng01-180G14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaatagactggaccagaaaagaaattcctcccaacacataata
atcagaacaacaaatgcactaaataaagatagaatactaaaagcggtaag
ggaaaaggtcaagtaacatacaaaggcaagcctatcagaattacaccaga
tttttcaccagagactatgaaagccagaagagcctggacagatgttatac
agacactaagagaacacaaattccagcccaggctactatacccagccaaa
ctctcaattaccatagatggagaaaccaaagtattccacgacaaaaccaa
attcacacattatctctccacgaatccagcccttcaaaggttaataacag
aaaaaaaccaatacaagaacgggaacaatgccctagaaaaaacaagaagg
taatcactcaacaaacctaaaagaagacagccacaagaacagaatgccaa
ctttaacaacaaaaataacaggaagcaacaattacttttccttaatatct
cttaacatcaatggtctcaactccccaataaaaagacatagactaacaaa
ctggctacacaaacaagacccaacattttgctgtttacaggagacacatc
tcagagaaaaagatagacactacctcagaataaaaggctggaaaacaatt
ttccaagcaaatggtatgaagaaacaagctggagtagccatcctaatatc
tgataagattgacttccaacccacagccatcaaaaaagacaaggaggggc
acttcgttctcatcaaaggtaaaatcctccaagaggaactctcaattctg
aatatctatgctccaaatacaaagggcagccacattcattaaagaaactt
tagtaaagctcaaagcacacattgcacctcacacaataatagtgggagac
ttcaacataccactttcaccaatggacagatcatggaaacagaaactaaa
cagggacacactgaaactaacagaagtgatgaaacaaatggatctgacag
atatctacagaacatttttattcctaaaacaaaaggatatacctctctca
gcacctcatggtactctcaaatgaccacataataggtcacaaacagtctc
acgaattcaaaaatatgaatgtccatgcattctatcgatcacatgcctaa
gcctgacttccataccaaaaagattactggaaaggcctaaccacttccta
c
gaattcaatcccagctcccctgttctccctccactctgagagcgcagggc
tgttacaaagcaaaggcgtgacccacccagcactgaggttaaaaatgcgc
attctcgatgacagaatccatccttccacatatcgtatcggaggttgttt
ttctaagattaaaagcaaacatcaagagctattggttttcctgaccaaga
gaaggcttacaggataaaaatgggggaacaaggggagaacataaagatta
gcctaccaagccgataatttcccattttacttttcctgacttgtttaaat
atttgtgcttacacgatggggtcccactcaaactgcaacatttccagaca
cttgagtctataaccgagccagtgggtgacctgttgccaaggaaacaatg
gtcccttctctaaatgccccacacagtgacctttcaataactttagggaa
gttgggattggctccgaaatatagttctgttgcttaatagctgtgtggcc
ttgggcatctcagggtacctgcctgagtctgttttctgatctgaaaatgg
ggaccggtgatagcagttccctcggagtgagtgtttgtaagcaccaaatg
agatcctctgggtagcaggcagtgtatatcctgccacagtatgactcagt
gaatattatatgattttgctaagatggatttgagaaaattaagccgtgtt
taagggctgagtcctgaaggcatgagttaaagacaacgaaaccatcccaa
cctttacaaaactccacaaggagccaggtatggtggctccgatctctaaa
tcctagcctgtagtccaaatagggagcctgaagcaggattgtttgtggtc
agtctgcacgcactacctagggagtgtcaggccaggctgagttatagagt
aagctctagtcccaaacaaataaaagcaaccactgtaaggggctgggatg
gtggctgtctgggtaggagcacttgatacacaatctgaagagctgagacc
caatccccagcacctatgtaagaaagctaggcatgttcacatatacctta
gcgccagcactgtgaaaggtggaagataaaaggatgctggggctgctgct
gcttgctagcctcttggatccagttagagactgtctcaagactaagactg
gaattaatattaatcaataacctgacactcttccccttgccatttgcaat
gtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_120621276_120622481
seq2: B6Ng01-180G14.g_66_1270 (reverse)

seq1  CACACA-TGCAAAT-GCCAGGGGAAGA-TGTCAGG-TATTGATTTATTAT  46
      |||||| ||||||| || ||||||||| ||||||| |||||| ||| |||
seq2  CACACATTGCAAATGGCAAGGGGAAGAGTGTCAGGTTATTGA-TTAATAT  49

seq1  TTATTCTCAGTCTTAGTCCTTTGAGACAGGTCTCTAACTGAATCC-AGA-  94
      | |||| |||||||||||  |||||||| ||||||||||| |||| ||| 
seq2  TAATTC-CAGTCTTAGTC--TTGAGACA-GTCTCTAACTGGATCCAAGAG  95

seq1  GCTAGGCAGGCAGCCAGCAAGCCCCAGCCATCCTTTTATC-TCCACCTTT  143
      |||| ||| |||| |||| |||||||| |||||||||||| |||||||||
seq2  GCTA-GCAAGCAG-CAGC-AGCCCCAG-CATCCTTTTATCTTCCACCTTT  141

seq1  CACAGTGCTGGCGCTAAGGTATATGTGAACATGCCTAGCTTTC-TACATA  192
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CACAGTGCTGGCGCTAAGGTATATGTGAACATGCCTAGCTTTCTTACATA  191

seq1  GGTGCTGGGGATTTGGTCTCAGCTCTTCAAGATTGTGTATCAAGTGCTCC  242
      ||||||||||||| |||||||||||||| |||||||||||||||||||||
seq2  GGTGCTGGGGATTGGGTCTCAGCTCTTC-AGATTGTGTATCAAGTGCTCC  240

seq1  TACCCAGACAGCCACCATCCCAGCCCCTTACAGTGG-TGCTTTTATTTGT  291
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TACCCAGACAGCCACCATCCCAGCCCCTTACAGTGGTTGCTTTTATTTGT  290

seq1  TTGGGACTAGAGCTTACTCTATAACTCAGCCTGGCCTGACACTCCCTAGG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGACTAGAGCTTACTCTATAACTCAGCCTGGCCTGACACTCCCTAGG  340

seq1  TAGTGCGTGCAGACTGACCACAAACAATCCTGCTTCAGGCTCCCTATTTG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCGTGCAGACTGACCACAAACAATCCTGCTTCAGGCTCCCTATTTG  390

seq1  GACTACAGGCTAGGATTTAGAGATCGGAGCCACCATACCTGGCTCCTTGT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACAGGCTAGGATTTAGAGATCGGAGCCACCATACCTGGCTCCTTGT  440

seq1  GGAGTTTTGTAAAGGTTGGGATGGTTTCGTTGTCTTTAACTCATGCCTTC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTTGTAAAGGTTGGGATGGTTTCGTTGTCTTTAACTCATGCCTTC  490

seq1  AGGACTCAGCCCTTAAACACGGCTTAATTTTCTCAAATCCATCTTAGCAA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTCAGCCCTTAAACACGGCTTAATTTTCTCAAATCCATCTTAGCAA  540

seq1  AATCATATAATATTCACTGAGTCATACTGTGGCAGGATATACACTGCCTG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATATAATATTCACTGAGTCATACTGTGGCAGGATATACACTGCCTG  590

seq1  CTACCCAGAGGATCTCATTTGGTGCTTACAAACACTCACTCCGAGGGAAC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCAGAGGATCTCATTTGGTGCTTACAAACACTCACTCCGAGGGAAC  640

seq1  TGCTATCACCGGTCCCCATTTTCAGATCAGAAAACAGACTCAGGCAGGTA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATCACCGGTCCCCATTTTCAGATCAGAAAACAGACTCAGGCAGGTA  690

seq1  CCCTGAGATGCCCAAGGCCACACAGCTATTAAGCAACAGAACTATATTTC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGATGCCCAAGGCCACACAGCTATTAAGCAACAGAACTATATTTC  740

seq1  GGAGCCAATCCCAACTTCCCTAAAGTTATTGAAAGGTCACTGTGTGGGGC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCAATCCCAACTTCCCTAAAGTTATTGAAAGGTCACTGTGTGGGGC  790

seq1  ATTTAGAGAAGGGACCATTGTTTCCTTGGCAACAGGTCACCCACTGGCTC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAGAAGGGACCATTGTTTCCTTGGCAACAGGTCACCCACTGGCTC  840

seq1  GGTTATAGACTCAAGTGTCTGGAAATGTTGCAGTTTGAGTGGGACCCCAT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATAGACTCAAGTGTCTGGAAATGTTGCAGTTTGAGTGGGACCCCAT  890

seq1  CGTGTAAGCACAAATATTTAAACAAGTCAGGAAAAGTAAAATGGGAAATT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTAAGCACAAATATTTAAACAAGTCAGGAAAAGTAAAATGGGAAATT  940

seq1  ATCGGCTTGGTAGGCTAATCTTTATGTTCTCCCCTTGTTCCCCCATTTTT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGCTTGGTAGGCTAATCTTTATGTTCTCCCCTTGTTCCCCCATTTTT  990

seq1  ATCCTGTAAGCCTTCTCTTGGTCAGGAAAACCAATAGCTCTTGATGTTTG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTAAGCCTTCTCTTGGTCAGGAAAACCAATAGCTCTTGATGTTTG  1040

seq1  CTTTTAATCTTAGAAAAACAACCTCCGATACGATATGTGGAAGGATGGAT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAATCTTAGAAAAACAACCTCCGATACGATATGTGGAAGGATGGAT  1090

seq1  TCTGTCATCGAGAATGCGCATTTTTAACCTCAGTGCTGGGTGGGTCACGC  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCATCGAGAATGCGCATTTTTAACCTCAGTGCTGGGTGGGTCACGC  1140

seq1  CTTTGCTTTGTAACAGCCCTGCGCTCTCAGAGTGGAGGGAGAACAGGGGA  1191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTTTGTAACAGCCCTGCGCTCTCAGAGTGGAGGGAGAACAGGGGA  1190

seq1  GCTGGGATTGAATTC  1206
      |||||||||||||||
seq2  GCTGGGATTGAATTC  1205