BAC Information

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BAC

Clone NameB6Ng01-181H13
Chromosome8 (Build37)
Map Location 85,386,862 - 85,495,425
singlet/doubletdoublet
Overlap geneRnf150
Upstream geneInpp4b, LOC671182, Il15, EG666564, LOC675800, EG666289, Zfp330
Downstream geneLOC100039688, Tbc1d9, Ucp1, Elmod2, 4933434I20Rik, Clgn, Scoc, LOC546077, LOC675854, Olfr370, Ndufb7, Gpsn2, Dnajb1, Gipc1, Ptger1, Pkn1, Ddx39, Cd97, EG384857, Lphn1, Asf1b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181H13.bB6Ng01-181H13.g
ACCGA007623GA007624
length1,179816
definitionB6Ng01-181H13.b B6Ng01-181H13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,494,243 - 85,495,425)(85,386,862 - 85,387,727)
sequence
gaattcactatgtgaccaggttgacttgaacttacagagattcacctgcc
tctgcctcctgagtgctgggactaaaggtgtgtgccaccatgctgggttg
aagtgttgtttatgaaaagtgactaaatctattacttattatgtgcatat
ctagtgcaagagggatccctctggcactgtgtgaaggtggcaagtatgag
gaattggtgtagggtgtagtaagccacctggtgctgagaactagaccctg
atcctctgtgagaaaagcgaaccatctctccagccctcccatccccccac
agggtggtcttactgggccgtattgctcttgctcctgtgagaagacgagg
cccacagaatgatacagcccagggggcgccatacatgaaagcatcacgta
aacccacaaactattatcttactgcatcagaagttcagactacgaaacca
gcagtgccaaccaaggggcaggcaggacagtgcttctctgtgaagctctg
acggaggttgttttcctagctatccagctcccagacgtggcttatgtgct
tcagcttggagccacatcactgtgacccatttcctttttcctatttcatt
ctcgcactctctctgaacttcttgtctctcttttataggagttcttataa
ttacaggatcatctcaagttctaacttcatcgtatccatgaagtaccttt
gaactgaacatgacaaagactgcatttaagctgtcattactctggccaca
gtcaagggtgttagtggcgtatatttctggaaaaaaaatctcacaggagt
aggtacagccttcgagatctccccaaccacagtgaagtcccctcgtttcc
ccagctttagacatggactgtctatgtggatgggaaattaagattatgat
ttccctaaggtctactttggattgggataagagctgacttcagagacact
cagcccgtattcctcagtgctgagatggagaaccatctccttgattcctt
ttccctcaaaggagatactttccagtgcagcagcccagtattcagccaca
aacatgctctgggttagagatttcctaagaaaggcagacacatatcataa
cctgcccaaggaaagaacattggcttgatcacttggcataacaggttatt
ggtggatactgctggccataacagtatga
gaattctgacagccactgtcctaaatattcaggtctgggggggcgggggg
gaggggcctcatgaccaatcagtgctgggataaataccagagaactctct
gcacatcttccagcaaacggaaatgctgttccagagaggttcctacactt
tgctgtatttaagactccctcaattaattgttcccaattcaaaggcctga
aggtcctttttaccttttgcccgcaactgtcgaagcctgaatttgaggcc
cagcagaggtcgctgacgcccaggaagagagacagagtgagcgttgcaag
gggagcccaggagctttgacatcatactaagctcctccttgcacgcgcac
atcacacacacacacacacacacacacacacacacacacacacacacaca
cacacacacacacacaaatacagacacacacaaaacgctgtatccctctc
ctcacgctctcccccatcccatctgccccgtacctccccctccctcggca
agtgagtgtcccgggcgtagccacctagtctggccagaagcgcagcgcct
actgcccatgggaacccacgcataacaggagcgacctccgcgtctgcagc
gggaccgatagtcccagcaccgaggatctccagcacccccacccccgccc
cgctcggccgcgacaagcagagccgccaccccttccaaaacccgaggacc
ccgccacctctatggagagaaggcgacacggggcaaaggaacaggatgcc
tggtcagctcgtactcccctgcaagtgcgcggcgccccgctccgcgaccc
gcgccgcgattctccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_85494243_85495425
seq2: B6Ng01-181H13.b_44_1222 (reverse)

seq1  TCATAACTGTTAT-GCCAGCAGTATCCACACATATAACCTTGGTTTATGC  49
      |||| |||||||| ||||||||||||||| || |||||||    ||||||
seq2  TCAT-ACTGTTATGGCCAGCAGTATCCAC-CA-ATAACCT---GTTATGC  44

seq1  CAAAGTGGACCAGGCCCATGGTCCTTCC-TGGGCAGGGTTTATGATATGT  98
      | |||| || || ||| ||| || |||| ||||||||  |||||||||||
seq2  C-AAGT-GATCAAGCCAATGTTCTTTCCTTGGGCAGG--TTATGATATGT  90

seq1  GTCTGCCTTTCTTA-GAATTCTCTACCCAAGAGCATGTTTGTGGCTGAAT  147
      |||||||||||||| ||| |||||| || |||||||||||||||||||||
seq2  GTCTGCCTTTCTTAGGAAATCTCTAACCCAGAGCATGTTTGTGGCTGAAT  140

seq1  ACT-GGCTGCTGCACTGG-AAGTATCTCCTTTTGAGGGGAAAGGAATCAA  195
      ||| |||||||||||||| |||||||||| |||||||| |||||||||||
seq2  ACTGGGCTGCTGCACTGGAAAGTATCTCC-TTTGAGGGAAAAGGAATCAA  189

seq1  GGAGATGGTTCTCCATCTCAGCACTGAGGAATACGGGCTGAGTGTCTCTG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATGGTTCTCCATCTCAGCACTGAGGAATACGGGCTGAGTGTCTCTG  239

seq1  AAGTCAGCTCTTATCCCAATCC-AAGTAGACCTTA-GGAAATCATAATCT  293
      |||||||||||||||||||||| |||||||||||| ||||||||||||||
seq2  AAGTCAGCTCTTATCCCAATCCAAAGTAGACCTTAGGGAAATCATAATCT  289

seq1  TAATTTCCCATCCACATAGACAGTCCATGTCTAAAGCTGGGGAAACGAGG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCCCATCCACATAGACAGTCCATGTCTAAAGCTGGGGAAACGAGG  339

seq1  GGACTTCACTGTGGTTGGGGAGATCTCGAAGGCTGTACCTACTCCTGTGA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTCACTGTGGTTGGGGAGATCTCGAAGGCTGTACCTACTCCTGTGA  389

seq1  GATTTTTTTTCCAGAAATATACGCCACTAACACCCTTGACTGTGGCCAGA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTTTTCCAGAAATATACGCCACTAACACCCTTGACTGTGGCCAGA  439

seq1  GTAATGACAGCTTAAATGCAGTCTTTGTCATGTTCAGTTCAAAGGTACTT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGACAGCTTAAATGCAGTCTTTGTCATGTTCAGTTCAAAGGTACTT  489

seq1  CATGGATACGATGAAGTTAGAACTTGAGATGATCCTGTAATTATAAGAAC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGATACGATGAAGTTAGAACTTGAGATGATCCTGTAATTATAAGAAC  539

seq1  TCCTATAAAAGAGAGACAAGAAGTTCAGAGAGAGTGCGAGAATGAAATAG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATAAAAGAGAGACAAGAAGTTCAGAGAGAGTGCGAGAATGAAATAG  589

seq1  GAAAAAGGAAATGGGTCACAGTGATGTGGCTCCAAGCTGAAGCACATAAG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGGAAATGGGTCACAGTGATGTGGCTCCAAGCTGAAGCACATAAG  639

seq1  CCACGTCTGGGAGCTGGATAGCTAGGAAAACAACCTCCGTCAGAGCTTCA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGTCTGGGAGCTGGATAGCTAGGAAAACAACCTCCGTCAGAGCTTCA  689

seq1  CAGAGAAGCACTGTCCTGCCTGCCCCTTGGTTGGCACTGCTGGTTTCGTA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAGCACTGTCCTGCCTGCCCCTTGGTTGGCACTGCTGGTTTCGTA  739

seq1  GTCTGAACTTCTGATGCAGTAAGATAATAGTTTGTGGGTTTACGTGATGC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAACTTCTGATGCAGTAAGATAATAGTTTGTGGGTTTACGTGATGC  789

seq1  TTTCATGTATGGCGCCCCCTGGGCTGTATCATTCTGTGGGCCTCGTCTTC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGTATGGCGCCCCCTGGGCTGTATCATTCTGTGGGCCTCGTCTTC  839

seq1  TCACAGGAGCAAGAGCAATACGGCCCAGTAAGACCACCCTGTGGGGGGAT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGAGCAAGAGCAATACGGCCCAGTAAGACCACCCTGTGGGGGGAT  889

seq1  GGGAGGGCTGGAGAGATGGTTCGCTTTTCTCACAGAGGATCAGGGTCTAG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGCTGGAGAGATGGTTCGCTTTTCTCACAGAGGATCAGGGTCTAG  939

seq1  TTCTCAGCACCAGGTGGCTTACTACACCCTACACCAATTCCTCATACTTG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGCACCAGGTGGCTTACTACACCCTACACCAATTCCTCATACTTG  989

seq1  CCACCTTCACACAGTGCCAGAGGGATCCCTCTTGCACTAGATATGCACAT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTTCACACAGTGCCAGAGGGATCCCTCTTGCACTAGATATGCACAT  1039

seq1  AATAAGTAATAGATTTAGTCACTTTTCATAAACAACACTTCAACCCAGCA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTAATAGATTTAGTCACTTTTCATAAACAACACTTCAACCCAGCA  1089

seq1  TGGTGGCACACACCTTTAGTCCCAGCACTCAGGAGGCAGAGGCAGGTGAA  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCACACACCTTTAGTCCCAGCACTCAGGAGGCAGAGGCAGGTGAA  1139

seq1  TCTCTGTAAGTTCAAGTCAACCTGGTCACATAGTGAATTC  1183
      ||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTAAGTTCAAGTCAACCTGGTCACATAGTGAATTC  1179

seq1: chr8_85386862_85387727
seq2: B6Ng01-181H13.g_65_880

seq1  GAATTCTGACAGCCACTGTCCTAAATATTCAGGTCTGGGGGGGCGGGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGACAGCCACTGTCCTAAATATTCAGGTCTGGGGGGGCGGGGGG  50

seq1  GAGGGGCCTCATGACCAATCAGTGCTGGGATAAATACCAGAGAACTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGCCTCATGACCAATCAGTGCTGGGATAAATACCAGAGAACTCTCT  100

seq1  GCACATCTTCCAGCAAACGGAAATGCTGTTCCAGAGAGGTTCCTACACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATCTTCCAGCAAACGGAAATGCTGTTCCAGAGAGGTTCCTACACTT  150

seq1  TGCTGTATTTAAGACTCCCTCAATTAATTGTTCCCAATTCAAAGGCCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTATTTAAGACTCCCTCAATTAATTGTTCCCAATTCAAAGGCCTGA  200

seq1  AGGTCCTTTTTACCTTTTGCCCGCAACTGTCGAAGCCTGAATTTGAGGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCTTTTTACCTTTTGCCCGCAACTGTCGAAGCCTGAATTTGAGGCC  250

seq1  CAGCAGAGGTCGCTGACGCCCAGGAAGAGAGACAGAGTGAGCGTTGCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGAGGTCGCTGACGCCCAGGAAGAGAGACAGAGTGAGCGTTGCAAG  300

seq1  GGGAGCCCAGGAGCTTTGACATCATACTAAGCTCCTCCTTGCACGCGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCCCAGGAGCTTTGACATCATACTAAGCTCCTCCTTGCACGCGCAC  350

seq1  ATCACACACACACACACACACACACACACACACACACACACACACACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACACACACACACACACACACACACACACACACACACACACACACACA  400

seq1  CACACACACACACACAAATACAGACACACACAAAACGCTGTATCCCTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACAAATACAGACACACACAAAACGCTGTATCCCTCTC  450

seq1  CTCACGCTCTCCCCCATCCCATCTGCCCCGTACCTCCCCCTCCCTCGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACGCTCTCCCCCATCCCATCTGCCCCGTACCTCCCCCTCCCTCGGCA  500

seq1  AGTGAGTGTCCCGGGCGTAGCCACCTAGTCTGGCCAGAAGCGCAGCGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTGTCCCGGGCGTAGCCACCTAGTCTGGCCAGAAGCGCAGCGCCT  550

seq1  ACTGCCCATGGGAACCCACGCATAACAGGAGCGACCTCCGCGTCTGCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCCATGGGAACCCACGCATAACAGGAGCGACCTCCGCGTCTGCAGC  600

seq1  GGGACCGATAGTCCCAGCACCGAGGATCTCCAGCA-CCCCACCCCCGCCC  649
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GGGACCGATAGTCCCAGCACCGAGGATCTCCAGCACCCCCACCCCCGCCC  650

seq1  CGCTCGGCCGCGACAAGCAGAGCCGCCACCCCTTCC-AAACCCGAGGACC  698
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CGCTCGGCCGCGACAAGCAGAGCCGCCACCCCTTCCAAAACCCGAGGACC  700

seq1  CCGCCACCTCTAT-GAGAGAAGGCGACACGGGGCAAAGGAACAGGACGCC  747
      ||||||||||||| |||||||||||||||||||||||||||||||| |||
seq2  CCGCCACCTCTATGGAGAGAAGGCGACACGGGGCAAAGGAACAGGATGCC  750

seq1  TGG-CAGC-CGGACTCCCCCGCAAGTGCGCGGCG-CCCGCTCCGCGA-CC  793
      ||| |||| || ||||||| |||||||||||||| |||||||||||| ||
seq2  TGGTCAGCTCGTACTCCCCTGCAAGTGCGCGGCGCCCCGCTCCGCGACCC  800

seq1  GCGCCGCGA-TCACCCGGGAAGCCCGATGCCAGCGCCGCGCTTCGGCTGA  842
      ||||||||| || |||                                  
seq2  GCGCCGCGATTCTCCC----------------------------------  816

seq1  GAGGGGACAGGGCGGGTTTCTCCC  866
                              
seq2  ------------------------  816