BAC Information

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BAC

Clone NameB6Ng01-181M21
Chromosome8 (Build37)
Map Location 64,373,900 - 64,374,993
singlet/doubletsinglet
Overlap genePalld
Upstream gene2700029M09Rik, Clcn3, B230317F23Rik, Nek1, Sh3rf1, EG664975, Cbr4, LOC100040872
Downstream geneBC013672, Anxa10, LOC100040775, LOC384830, LOC100040804, LOC665267
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181M21.bB6Ng01-181M21.g
ACCGA007866GA007867
length1,1661,090
definitionB6Ng01-181M21.b B6Ng01-181M21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaatccaggtgacagc
agatgctggtgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaactgaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcaccctgagtgaggtaacccaatcacaaa
ggaacttgcacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacacaagatataagatacaatttgctaaatgcatgaaactcaa
gaatgaagaccaaagtgtggacactttgccccttcctagaaatggaaaca
aaacacccatggacggagttacagagacaaaatttggagctgtggcgaaa
ggatggaccatctagtgattgccatatccagggatccatcccacaatcag
cttccaaacgctgacaccattgaatacactagcaagattttgctgtaagg
acccagatatagctgtctcttgtgagactatgccggggcctagcaaacac
agaagtggatgctcacagtcagctattggataggtcacacggcccctaat
ggaggagctagagaaaatacccaaggagcaaagggaactgcaaccctata
tgtggaacacatatgaactaaccagtacccaggagctcttgtcttctagc
tgcatattgtatcaaaagatggctagtcagctatcactggaaagaaggag
ccctttggactgcaacttatatgcccagttacagggaaacggcaaggcca
aaaggaatttggttgt
gaattccatggtggagaattttctacttgtgatgttaggccagcacttta
aaaagtctagggttttgagctacttggggatttccagtttggggataggg
ttgctcaacatgtactagaattgctggaaaacagactgggtgattttttt
tgcttctgatgttttacatgaaactcttctttggctgatgataagaaatg
taagtcagaatcattagagataagagtttaatactatcttaaacattttt
ttaaatgagcaagtagtgcacatcttacatgcaaatatcagcagttctgt
catgagcaagttctgtcagtggcatagataggcatatttcagtctttcca
aaatgtgggaatttattaaataacaacaaatttacaagccaaaccaattt
ctttggctttaactgagaaagtactcctgattccactgagtactgatgat
caatagcaaacacaggtacttcagttcttcatttcttagtgtttgttagt
tgcttggttgttttgtttggggatggagcttgtttgtgccacaagctttc
aaacgttgttcttgtcttctaccttgttaaggcagctctcatttctcctg
cactgcatactccaggcaatctgggctacaagtttccaggcaattctcca
gtctgtcttccttcctgccatgggactgccggcattgcaatgtacagccc
tccatctagctttctatgtgatttccaggactcaaatgcaagtcaccagg
ctgcacagttagtatttaacctgagtcactttgccagccccactgatccc
caatcttaattactacaataattgttagattacgcattatactaggcatg
tgagtattatttgtgtatgtgagacacaatggctcttataagaggctaaa
ccggctatgctgttcagaggaactacactgaaaggcaaggcagggagttg
atacagtgcaaaggggaatacttctataggaagactggataaggaccaca
gaaacagaactgtagagtgcagagctatcaatgcaagtctcagtgacagc
aacttaaatgtcagttcagtgctgtgtgtcagaagggtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_64373900_64374993
seq2: B6Ng01-181M21.g_69_1158 (reverse)

seq1  TCACC--TCTGACACACAAGGCCACTTGAAACTGACATTTAAAGTTGCCT  48
      |||||  |||||||||||    ||||   ||||||||||| |||||| ||
seq2  TCACCCTTCTGACACACA---GCACT--GAACTGACATTT-AAGTTG-CT  43

seq1  GTCACTGAGACCTGCATTGATAGCTCTGCACTCTAACAGTTCTGTTTCTG  98
      ||||||||||| |||||||||||||||||||||| |||||||||||||||
seq2  GTCACTGAGACTTGCATTGATAGCTCTGCACTCT-ACAGTTCTGTTTCTG  92

seq1  TGGTTCTTATCCAGTCTT-CTATAG-AGTATTCCCC-TTGCACCTGTATC  145
      |||| ||||||||||||| |||||| |||||||||| ||||| |||||||
seq2  TGGTCCTTATCCAGTCTTCCTATAGAAGTATTCCCCTTTGCA-CTGTATC  141

seq1  AACTCCCTGCCTTGCCTTTCAGTGTAGTTCCTCTGAACAGCATAGCCGGT  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCCTGCCTTGCCTTTCAGTGTAGTTCCTCTGAACAGCATAGCCGGT  191

seq1  TTAGCCTCTTATAAGAGCCATTGTGTCTCACATACACAAATAATACTCAC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCTCTTATAAGAGCCATTGTGTCTCACATACACAAATAATACTCAC  241

seq1  ATGCCTAGTATAATGCGTAATCTAACAATTATTGTAGTAATTAAGATTGG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTAGTATAATGCGTAATCTAACAATTATTGTAGTAATTAAGATTGG  291

seq1  GGATCAGTGGGGCTGGCAAAGTGACTCAGGTTAAATACTAACTGTGCAGC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAGTGGGGCTGGCAAAGTGACTCAGGTTAAATACTAACTGTGCAGC  341

seq1  CTGGTGACTTGCATTTGAGTCCTGGAAATCACATAGAAAGCTAGATGGAG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGACTTGCATTTGAGTCCTGGAAATCACATAGAAAGCTAGATGGAG  391

seq1  GGCTGTACATTGCAATGCCGGCAGTCCCATGGCAGGAAGGAAGACAGACT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTACATTGCAATGCCGGCAGTCCCATGGCAGGAAGGAAGACAGACT  441

seq1  GGAGAATTGCCTGGAAACTTGTAGCCCAGATTGCCTGGAGTATGCAGTGC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAATTGCCTGGAAACTTGTAGCCCAGATTGCCTGGAGTATGCAGTGC  491

seq1  AGGAGAAATGAGAGCTGCCTTAACAAGGTAGAAGACAAGAACAACGTTTG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAATGAGAGCTGCCTTAACAAGGTAGAAGACAAGAACAACGTTTG  541

seq1  AAAGCTTGTGGCACAAACAAGCTCCATCCCCAAACAAAACAACCAAGCAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTGTGGCACAAACAAGCTCCATCCCCAAACAAAACAACCAAGCAA  591

seq1  CTAACAAACACTAAGAAATGAAGAACTGAAGTACCTGTGTTTGCTATTGA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAAACACTAAGAAATGAAGAACTGAAGTACCTGTGTTTGCTATTGA  641

seq1  TCATCAGTACTCAGTGGAATCAGGAGTACTTTCTCAGTTAAAGCCAAAGA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAGTACTCAGTGGAATCAGGAGTACTTTCTCAGTTAAAGCCAAAGA  691

seq1  AATTGGTTTGGCTTGTAAATTTGTTGTTATTTAATAAATTCCCACATTTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGTTTGGCTTGTAAATTTGTTGTTATTTAATAAATTCCCACATTTT  741

seq1  GGAAAGACTGAAATATGCCTATCTATGCCACTGACAGAACTTGCTCATGA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGACTGAAATATGCCTATCTATGCCACTGACAGAACTTGCTCATGA  791

seq1  CAGAACTGCTGATATTTGCATGTAAGATGTGCACTACTTGCTCATTTAAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACTGCTGATATTTGCATGTAAGATGTGCACTACTTGCTCATTTAAA  841

seq1  AAAATGTTTAAGATAGTATTAAACTCTTATCTCTAATGATTCTGACTTAC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTTTAAGATAGTATTAAACTCTTATCTCTAATGATTCTGACTTAC  891

seq1  ATTTCTTATCATCAGCCAAAGAAGAGTTTCATGTAAAACATCAGAAGCAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTATCATCAGCCAAAGAAGAGTTTCATGTAAAACATCAGAAGCAA  941

seq1  AAAAAATCACCCAGTCTGTTTTCCAGCAATTCTAGTACATGTTGAGCAAC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATCACCCAGTCTGTTTTCCAGCAATTCTAGTACATGTTGAGCAAC  991

seq1  CCTATCCCCAAACTGGAAATCCCCAAGTAGCTCAAAACCCTAGACTTTTT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCCCCAAACTGGAAATCCCCAAGTAGCTCAAAACCCTAGACTTTTT  1041

seq1  AAAGTGCTGGCCTAACATCACAAGTAGAAAATTCTCCACCATGGAATTC  1094
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCTGGCCTAACATCACAAGTAGAAAATTCTCCACCATGGAATTC  1090