BAC Information

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BAC

Clone NameB6Ng01-182I05
Chromosome8 (Build37)
Map Location 25,314,463 - 25,315,595
singlet/doubletsinglet
Overlap genenone
Upstream geneAgpat6, Gins4, Golga7, Sfrp1, LOC100040931, Zmat4
Downstream gene1810011O10Rik, Indol1, Indo, Adam18, Adam3, Adam5, Adam32, Adam9, Tm2d2, Htra4, Plekha2, LOC100042390, Tacc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182I05.bB6Ng01-182I05.g
ACCGA008381GA008382
length1,116708
definitionB6Ng01-182I05.b B6Ng01-182I05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttcaatttttgtgtgtctgttatagtctactgtgaaaaacca
gttagggtgatgattttacaggctcatttcagaaagtttctatagatgaa
accttttcaaactaaagttttaaattttagttttaaagttttaattggga
tttctgatgaaatcccaattaaatgctaggtaaaacacacacacaccaca
cacaatacacacatcacacacaccacacacacacacacacacaccccaca
cacatcatacactcacaccacacaccacacacttccctaacacgtacctt
tttgcacacccatggttacctaggaggtaaaagcagaaaagggagatttc
tctgaagtagttggagataaggaaaagtgagatttggttcctagtattca
gctagcaaaacccacatctagggtttatcaatggtctgagtgggtgtgcc
aagggttttgactgtcctcacacacacaaggattcagcacaaggtgactc
aggtctcagaaaggtagggtcggaatgtgaaccatttaggagcagcccat
ccctgagcagcccatgcactgagctgtagaagcctaagcaagaagttgaa
tcacaaaagtgcagctcaacagggcaaaaacaggcactgtgttttttttt
tttttagcattgttcaaggccaagccaagagacactgaatctgcaagatg
gccttaatttaattaccaggaaggtgtgcatatcaagggcgaggaaaaat
tcatcatgtcacaccagggccagccaggataaatcctcccagactcccga
ttcccctttgatctgattctgcacttactacctagcttagagttattttt
tttgacctctctgagaagaaattgtcctcaactggagacatggtagatct
tttctttggaaaaaacaaacaaaacaacaactctgtccttgtgtctaatg
gcattcctccatgtgctgtggtttatttgggtttgtgtgagtcagtatcc
ctgactcactttgcctgggacaaatgacagtattggacttctggggcagt
ggattcaaactgattactgtgtgagattccatgcagaatcaccagcctaa
cttataagctcacaga
gaattctctgcttagttctgtgccccattttaaaactgggttatttgttt
ttatgatggttgggagttttttgtatattttagaaactaatcttttatct
gaggcataaataaaaaggttttctcttatcccgttctgaagcctgctcca
ttcccccaaatgatggtgggctttgcggggccgaagcttcccagtgtcat
gaggtcccacttattaattgttggtcttagtgctgggctaggagtgttct
gttcagaaagtcctttcctgtgccaaggagtttaaatctactctgttttc
tcttctgtcagattcaggttctctggtcttatgttgagatctttgatgca
tttggaactgagttttgtgcagggtgataaatatggatctatttgcactc
ttcttcatggagccccccaactgcaccagcagtatttttttgaagatgct
gtctttctccagtgtgcattttgaacttctttgtcaaaactcaggtgact
gtatgtttgtggacttatatctaaacctttaattcaattagatcaatgtg
tctgtttttatgacaataacatgttatttttattactataactctacagg
gaaacttgaagtcagggatggagatactgctagaatttcttctattatct
aggattgttttagctatgttttttttttttttttttgggcgggggtggtg
tttgtttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_25314463_25315595
seq2: B6Ng01-182I05.b_43_1158 (reverse)

seq1  TCTGTGAGCTTTATTAGGTAAGGCTGGGTGATTCTTTGCCATTGAATCTC  50
      |||||||||||   || || ||||| |||||||||    ||| |||||||
seq2  TCTGTGAGCTT--ATAAGTTAGGCT-GGTGATTCT---GCATGGAATCTC  44

seq1  ACCAACAGTTATTCAGTTTGAATCCACTGCCCCCAGGAGTCCCAAATACT  100
      ||  |||| || ||||||||||||||||| |||||| |||||  ||||||
seq2  AC--ACAG-TAATCAGTTTGAATCCACTG-CCCCAGAAGTCC--AATACT  88

seq1  GTCA-TTGTCCCAGGGCAAAGTGAGTCAGGGATACTGACTCACACAAACC  149
      |||| |||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTCATTTGTCCCA-GGCAAAGTGAGTCAGGGATACTGACTCACACAAACC  137

seq1  AAATTAAAACCACAGCACATTGGAGGAATGCCATTAGAACACAAGGACAG  199
       || | ||||||||||||| ||||||||||||||||| ||||||||||||
seq2  CAAAT-AAACCACAGCACA-TGGAGGAATGCCATTAG-ACACAAGGACAG  184

seq1  AGTTGTTTTGTTTTGTTTTGTTTTTTCCAAAGAAAAGATCTACCATGTCT  249
      |||||  |||||||| ||||||||||||||||||||||||||||||||||
seq2  AGTTG--TTGTTTTG-TTTGTTTTTTCCAAAGAAAAGATCTACCATGTCT  231

seq1  CCAGTTGAGGACAATTTCTTCTCAGAGAGGTC-AAAAAAATAACTCTAAG  298
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CCAGTTGAGGACAATTTCTTCTCAGAGAGGTCAAAAAAAATAACTCTAAG  281

seq1  CTAGGTAGTAAGTGCAGAATCAGATCAAAGGGGAATCGGGAGTCTGGGAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTAGTAAGTGCAGAATCAGATCAAAGGGGAATCGGGAGTCTGGGAG  331

seq1  GATTTATCCTGGCTGGCCCTGGTGTGACATGATGAATTTTTCCTCGCCCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATCCTGGCTGGCCCTGGTGTGACATGATGAATTTTTCCTCGCCCT  381

seq1  TGATATGCACACCTTCCTGGTAATTAAATTAAGGCCATCTTGCAGATTCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATGCACACCTTCCTGGTAATTAAATTAAGGCCATCTTGCAGATTCA  431

seq1  GTGTCTCTTGGCTTGGCCTTGAACAATGCTAAAAAAAAAAAAAACACAGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTCTTGGCTTGGCCTTGAACAATGCTAAAAAAAAAAAAAACACAGT  481

seq1  GCCTGTTTTTGCCCTGTTGAGCTGCACTTTTGTGATTCAACTTCTTGCTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTTTTTGCCCTGTTGAGCTGCACTTTTGTGATTCAACTTCTTGCTT  531

seq1  AGGCTTCTACAGCTCAGTGCATGGGCTGCTCAGGGATGGGCTGCTCCTAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTCTACAGCTCAGTGCATGGGCTGCTCAGGGATGGGCTGCTCCTAA  581

seq1  ATGGTTCACATTCCGACCCTACCTTTCTGAGACCTGAGTCACCTTGTGCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTCACATTCCGACCCTACCTTTCTGAGACCTGAGTCACCTTGTGCT  631

seq1  GAATCCTTGTGTGTGTGAGGACAGTCAAAACCCTTGGCACACCCACTCAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCTTGTGTGTGTGAGGACAGTCAAAACCCTTGGCACACCCACTCAG  681

seq1  ACCATTGATAAACCCTAGATGTGGGTTTTGCTAGCTGAATACTAGGAACC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTGATAAACCCTAGATGTGGGTTTTGCTAGCTGAATACTAGGAACC  731

seq1  AAATCTCACTTTTCCTTATCTCCAACTACTTCAGAGAAATCTCCCTTTTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCACTTTTCCTTATCTCCAACTACTTCAGAGAAATCTCCCTTTTC  781

seq1  TGCTTTTACCTCCTAGGTAACCATGGGTGTGCAAAAAGGTACGTGTTAGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTACCTCCTAGGTAACCATGGGTGTGCAAAAAGGTACGTGTTAGG  831

seq1  GAAGTGTGTGGTGTGTGGTGTGAGTGTATGATGTGTGTGGGGTGTGTGTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTGTGGTGTGTGGTGTGAGTGTATGATGTGTGTGGGGTGTGTGTG  881

seq1  TGTGTGTGTGTGGTGTGTGTGATGTGTGTATTGTGTGTGGTGTGTGTGTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGGTGTGTGTGATGTGTGTATTGTGTGTGGTGTGTGTGTG  931

seq1  TTTTACCTAGCATTTAATTGGGATTTCATCAGAAATCCCAATTAAAACTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACCTAGCATTTAATTGGGATTTCATCAGAAATCCCAATTAAAACTT  981

seq1  TAAAACTAAAATTTAAAACTTTAGTTTGAAAAGGTTTCATCTATAGAAAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTAAAATTTAAAACTTTAGTTTGAAAAGGTTTCATCTATAGAAAC  1031

seq1  TTTCTGAAATGAGCCTGTAAAATCATCACCCTAACTGGTTTTTCACAGTA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAAATGAGCCTGTAAAATCATCACCCTAACTGGTTTTTCACAGTA  1081

seq1  GACTATAACAGACACACAAAAATTGAAATGAATTC  1133
      |||||||||||||||||||||||||||||||||||
seq2  GACTATAACAGACACACAAAAATTGAAATGAATTC  1116