BAC Information

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BAC

Clone NameB6Ng01-182K21
Chromosome8 (Build37)
Map Location 59,284,744 - 59,390,430
singlet/doubletdoublet
Overlap genenone
Upstream geneAdam29, Glra3, LOC664812, Hpgd, LOC664948, BC088983, Fbxo8, LOC100040431, EG624433
Downstream geneLOC654355, LOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634, LOC100040711
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182K21.bB6Ng01-182K21.g
ACCGA008507GA008508
length1,0001,133
definitionB6Ng01-182K21.b B6Ng01-182K21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,284,744 - 59,285,401)(59,389,290 - 59,390,430)
sequence
gaattctttgaaggtgaataattagatgagaaattttagttttaggagta
tattttcctatatacataaaaatcatgtgctcttctatgcctttgttgta
tcctttctaatacaatctattttttattctataatgtttcaaaatcaatt
ttaatactcctttgtagtctcccctcccctagcctgaaacctgcttgctc
ggggtggagcttcttgctcatttattctgccacgcccactgctggaacct
gcggagccacacacgtgcacctttctactggaccagagattattcggcgg
gaatcgggtcccctcccctttccttcataactagtgtcgcaacaataaaa
tttgagccttgatcagagtaactgtcttggctacattcttttctctcgcc
acctagcccctcttctcttccaggtttccaaaatgcctttccaggctaga
acccaggttgtggtctgctggccggacacaacaattggcgcaccaacgcg
ggactgagaaacggcaaaggatttttggaagagacgctgctggttcggag
ctccataaaataaaggataagggaaattcataccggagaaggtatgggct
aagctgagacagcgttaaacccaagcgctggttcacttaggttcagcagt
gaggagctgggtatcaggcagtaggccgtagctctctgaagctacatgag
gtgtgagaaaagaaagggtttattaaaaggaataggcggattgccccagt
taataaaaaatgcatcataagggaggaaaatgtcccaaaaagcagagaga
aatatctctctgggccttatagcagagtactctgttcccttttgtgtctt
gtctaatgtcccggtgcaccaatctgttctcgtgttcaattcatgtatgt
tcgtgtccagtctgtatgaatgaatgttctatgttttgtgttggataata
aagatggtataaaaaactttatctgcaaagccgagaagctgccacgtgtt

gaattctttgttcagctctgagccccatttaataaccccaaataacattc
ttacctatctaggaactctgcaattacagtaatgagcagcctgacaagac
aggttcatgggtgaaatggtgggatgaatgttaccaattgctctctggta
ggatataaagctcacacggcaggatggaacacatgcctggtgtaggaaat
ctgaccaagagcccatgactaaagagctcatggacctcacaggagaaatt
actactgctgttttgctaaatgggcacaatataaaactaccttctagaga
tatgtatctttacccatagactaataaaaatatatttaaggtacaatttt
attcatttatcatattaaatgaatgttttattagtaaaaatgcattttca
gcacatataagtttatacataagatatctatttgcaaaagcatgttagaa
attatttttataaattataaaaacacaaaattcatggatcattctaattt
cataaataatgatgaaacaaaaagctactatgcatgtttaaaaattaacc
taaatgtatgtaaaagcaaagactatataataccataatattatgaataa
tgaaattagccccaaaactcagcatgtgatagatgtttttgtaagtgtct
ttcactgtattaaaataaaggtttgtgaggcgttaccggtaaggacaaag
ccttgcttagctccttcctagctatgtggtagactgaataaattaatttc
ttgctttgccaggctcataagtttaaaacatagagttagaatcacagttc
attataattgaacacttagtctgcaatcaactcaagctattacataggaa
aataaattatcttatcataaaggtaaagaatgtgtgaacacttcaactcc
ctaatttttaaagcataactgttctctgcaaatagaattattctagaaag
tagaaatattcaagtgcattgatcatagaacattatcgctacctttcatc
tgttaaacccctccatgtgataccactcaccttagactctataaaataga
atgatccaaaaaccattttcgcgagctatatttcattgcaggcacttgct
ggccattagcagcttaggttttcagagaatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_59284744_59285401
seq2: B6Ng01-182K21.b_47_704

seq1  GAATTCTTTGAAGGTGAATAATTAGATGAGAAATTTTAGTTTTAGGAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGAAGGTGAATAATTAGATGAGAAATTTTAGTTTTAGGAGTA  50

seq1  TATTTTCCTATATACATAAAAATCATGTGCTCTTCTATGCCTTTGTTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCCTATATACATAAAAATCATGTGCTCTTCTATGCCTTTGTTGTA  100

seq1  TCCTTTCTAATACAATCTATTTTTTATTCTATAATGTTTCAAAATCAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTAATACAATCTATTTTTTATTCTATAATGTTTCAAAATCAATT  150

seq1  TTAATACTCCTTTGTAGTCTCCCCTCCCCTAGCCTGAAACCTGCTTGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATACTCCTTTGTAGTCTCCCCTCCCCTAGCCTGAAACCTGCTTGCTC  200

seq1  GGGGTGGAGCTTCTTGCTCATTTATTCTGCCACGCCCACTGCTGGAACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGAGCTTCTTGCTCATTTATTCTGCCACGCCCACTGCTGGAACCT  250

seq1  GCGGAGCCACACACGTGCACCTTTCTACTGGACCAGAGATTATTCGGCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGAGCCACACACGTGCACCTTTCTACTGGACCAGAGATTATTCGGCGG  300

seq1  GAATCGGGTCCCCTCCCCTTTCCTTCATAACTAGTGTCGCAACAATAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCGGGTCCCCTCCCCTTTCCTTCATAACTAGTGTCGCAACAATAAAA  350

seq1  TTTGAGCCTTGATCAGAGTAACTGTCTTGGCTACATTCTTTTCTCTCGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGCCTTGATCAGAGTAACTGTCTTGGCTACATTCTTTTCTCTCGCC  400

seq1  ACCTAGCCCCTCTTCTCTTCCAGGTTTCCAAAATGCCTTTCCAGGCTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGCCCCTCTTCTCTTCCAGGTTTCCAAAATGCCTTTCCAGGCTAGA  450

seq1  ACCCAGGTTGTGGTCTGCTGGCCGGACACAACAATTGGCGCACCAACGCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGTTGTGGTCTGCTGGCCGGACACAACAATTGGCGCACCAACGCG  500

seq1  GGACTGAGAAACGGCAAAGGATTTTTGGAAGAGACGCTGCTGGTTCGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGAGAAACGGCAAAGGATTTTTGGAAGAGACGCTGCTGGTTCGGAG  550

seq1  CTCCATAAAATAAAGGATAAGGGAAATTCATACCGGAGAAGGTATGGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATAAAATAAAGGATAAGGGAAATTCATACCGGAGAAGGTATGGGCT  600

seq1  AAGCTGAGACAGCGTTAAACCCAAGCGCTGGTTCACTTAGGTTCAGCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGAGACAGCGTTAAACCCAAGCGCTGGTTCACTTAGGTTCAGCAGT  650

seq1  GAGGAGCT  658
      ||||||||
seq2  GAGGAGCT  658

seq1: chr8_59389290_59390430
seq2: B6Ng01-182K21.g_65_1197 (reverse)

seq1  AAAAATCTCTGAGAAACCTAAAAGCTGCTAATGGCCAGCCAAGTGCTTGC  50
      |||| ||||||| ||||||  ||||||||||||||||| ||||||| |||
seq2  AAAATTCTCTGA-AAACCT--AAGCTGCTAATGGCCAG-CAAGTGCCTGC  46

seq1  CAAATGAAATAT-GCTCGCGAAAATGGGTTTTTGGGAATCATTCTATTTA  99
        |||||||||| |||||||||||| |||||||||  |||||||||||| 
seq2  --AATGAAATATAGCTCGCGAAAAT-GGTTTTTGG--ATCATTCTATTTT  91

seq1  TAAGAGTCTAAAGGTGAAGTGGTTATCACATGGAGGGGTTTAACAGATGG  149
        ||||||| |||||| ||||| ||||||||||||||||||||||||| |
seq2  ATAGAGTCT-AAGGTG-AGTGG-TATCACATGGAGGGGTTTAACAGAT-G  137

seq1  AAAGGTAGCGATAATGTTCTATGATCAATGCACTTGAATA-TTCTACTTT  198
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAAGGTAGCGATAATGTTCTATGATCAATGCACTTGAATATTTCTACTTT  187

seq1  CTAG-ATAATTCTATTTGCAGAGAACAGTTATGCTTTAAAA--TAGGGAG  245
      |||| ||||||||||||||||||||||||||||||||||||  |||||||
seq2  CTAGAATAATTCTATTTGCAGAGAACAGTTATGCTTTAAAAATTAGGGAG  237

seq1  TTGAAGTGTTCACACATTCTTTACCTTTATGATAAGATAATTTATTTTCC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTGTTCACACATTCTTTACCTTTATGATAAGATAATTTATTTTCC  287

seq1  TATGTAATAGCTTGAGTTGATTGCAGACTAAGTGTTCAATTATAATGAAC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAATAGCTTGAGTTGATTGCAGACTAAGTGTTCAATTATAATGAAC  337

seq1  TGTGATTCTAACTCTATGTTTTAAACTTATGAGCCTGGCAAAGCAAGAAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTCTAACTCTATGTTTTAAACTTATGAGCCTGGCAAAGCAAGAAA  387

seq1  TTAATTTATTCAGTCTACCACATAGCTAGGAAGGAGCTAAGCAAGGCTTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTATTCAGTCTACCACATAGCTAGGAAGGAGCTAAGCAAGGCTTT  437

seq1  GTCCTTACCGGTAACGCCTCACAAACCTTTATTTTAATACAGTGAAAGAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTACCGGTAACGCCTCACAAACCTTTATTTTAATACAGTGAAAGAC  487

seq1  ACTTACAAAAACATCTATCACATGCTGAGTTTTGGGGCTAATTTCATTAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACAAAAACATCTATCACATGCTGAGTTTTGGGGCTAATTTCATTAT  537

seq1  TCATAATATTATGGTATTATATAGTCTTTGCTTTTACATACATTTAGGTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATATTATGGTATTATATAGTCTTTGCTTTTACATACATTTAGGTT  587

seq1  AATTTTTAAACATGCATAGTAGCTTTTTGTTTCATCATTATTTATGAAAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTAAACATGCATAGTAGCTTTTTGTTTCATCATTATTTATGAAAT  637

seq1  TAGAATGATCCATGAATTTTGTGTTTTTATAATTTATAAAAATAATTTCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATGATCCATGAATTTTGTGTTTTTATAATTTATAAAAATAATTTCT  687

seq1  AACATGCTTTTGCAAATAGATATCTTATGTATAAACTTATATGTGCTGAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGCTTTTGCAAATAGATATCTTATGTATAAACTTATATGTGCTGAA  737

seq1  AATGCATTTTTACTAATAAAACATTCATTTAATATGATAAATGAATAAAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATTTTTACTAATAAAACATTCATTTAATATGATAAATGAATAAAA  787

seq1  TTGTACCTTAAATATATTTTTATTAGTCTATGGGTAAAGATACATATCTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACCTTAAATATATTTTTATTAGTCTATGGGTAAAGATACATATCTC  837

seq1  TAGAAGGTAGTTTTATATTGTGCCCATTTAGCAAAACAGCAGTAGTAATT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGGTAGTTTTATATTGTGCCCATTTAGCAAAACAGCAGTAGTAATT  887

seq1  TCTCCTGTGAGGTCCATGAGCTCTTTAGTCATGGGCTCTTGGTCAGATTT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGTGAGGTCCATGAGCTCTTTAGTCATGGGCTCTTGGTCAGATTT  937

seq1  CCTACACCAGGCATGTGTTCCATCCTGCCGTGTGAGCTTTATATCCTACC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACACCAGGCATGTGTTCCATCCTGCCGTGTGAGCTTTATATCCTACC  987

seq1  AGAGAGCAATTGGTAACATTCATCCCACCATTTCACCCATGAACCTGTCT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGCAATTGGTAACATTCATCCCACCATTTCACCCATGAACCTGTCT  1037

seq1  TGTCAGGCTGCTCATTACTGTAATTGCAGAGTTCCTAGATAGGTAAGAAT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGGCTGCTCATTACTGTAATTGCAGAGTTCCTAGATAGGTAAGAAT  1087

seq1  GTTATTTGGGGTTATTAAATGGGGCTCAGAGCTGAACAAAGAATTC  1141
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTGGGGTTATTAAATGGGGCTCAGAGCTGAACAAAGAATTC  1133