BAC Information

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BAC

Clone NameB6Ng01-182N03
Chromosome8 (Build37)
Map Location 103,126,041 - 103,310,547
singlet/doubletdoublet
Overlap geneLOC100042092, LOC384895
Upstream geneLOC667531, LOC100042069, LOC436054, LOC100042078, LOC100042086
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182N03.bB6Ng01-182N03.g
ACCGA008609GA008610
length1,0731,023
definitionB6Ng01-182N03.b B6Ng01-182N03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,126,041 - 103,126,927)(103,309,531 - 103,310,547)
sequence
gaattcacgcagttgaatccttctcaacagtctgctttacgggaaccttt
attaccgtgacccgcagttctggttctggaatgagggatcttccttgcgc
cggtgaaactcccgtcctgagtttcctcccgggttttttcttcccggatt
ttctcgtcccggaatttctcgtcccggattttcttgtcccggatttcggc
accaattcttacacgcgttctcacgcccggccaggaaagaacacaacaaa
ccagaatcttctgcggcaaaactttattgcttacatcttcaggagcagga
gcgcaaaaccccaagccccaaaaacgaaagccaccccaaatacatcttta
ggagccagagcgccagcgcgcagagcgcaaaagcgcaagcaagagctcta
ttgtttacatctttaggagccagaagccagcgcgcgccagtgcgccagag
cgaagagtgcaagtaagagaagagaatggcggaaaccccgtcccctttaa
ggaggagttatccttcgcttaggacgcatcactccctgattggctgcagc
ccatggccgagtaaaggcagagtacatgtagtggtaaaatacccttggca
catgcgcagattatttgtttaccacttagaacacaggatgtcagcgccat
cttgtgacggcgaatgtgggggcggctcccaacaaataaatatatgcata
tcaactttatcattctattgagaggttggcaagattgttgtacacaacat
gatgtcaaaataagtaaatgaaaatcatgtttatgaatgataaaacaagg
aatatgataaagttaagcattcacataaaaattttacaaagtttaacagt
tgtttctgttgtcaatatttgtaaatgaaaatttaaaaatctgtgatcaa
tgagaagtactagctatgcatatgactaaagttcatatgttgaaatcttg
tttccaacatgttacactagtgaagaaattatgggaattttaggaaggta
gaatccccacatttatagatgattagcattaatggttgatcagaagtgaa
tatcatttataagtggtgtagcc

gaattcaaggagacattcagatttctattgcctaggtattaaaaagggaa
tttcaaatcaagtattccctaccagagatctagtaattcctgatttttca
ctttttttccacatttgaatggctgattgaaatgtaattctggaggataa
tataatttgtctgtgcttgtaatttatgtgaactgccagggcttactttc
aaactgaaggtgaatatatcttccgaatttcatggacttctgtacacaat
attcacagacaattccttttagtgtagttcttggcctgaaatctaccagt
agccaaaatttagcctaaatttgtaagaaagcttcaatttaagagatatg
tgcatttcttttctgccagtcattaggcaaatatagtcattaagaattct
ttattacgattttcaaaactagaaacttaaatccaaatataatagtatcc
tcttctattatggtccagacttcactgcctatcattgaccaaagatgagc
ctcaatttatttatttatttatttatttgtttatttatttatttatttcc
tattccacctttattttcagcaaactatttcaaaagtgattttttttctc
ttcattccttttcatactcagtaaattcatagacatgtaattgtcttctt
ggcttacaatgtaaatcccaatagttttatcttgatttaaatcatctttc
ataattttggtctaatgtcctctgctcatcatcatgcatttcctcttttc
acttcattccactgttttcaaagcactgctgcccacgcatgttcccaacg
agtctcaccattaacagaaacactacaagcaaaagcagaaatgacttatg
acatattgaatatgtatatttgggttataatataaagcagtctcaatata
ttcattcataaatataaatttttgtgacacctaaaagtcaaagaatttca
agtaaagtatattcattaataagttattaatttactttattagaaggaaa
tatggatgtacatcctatattca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_103126041_103126927
seq2: B6Ng01-182N03.b_230_1116

seq1  TCCCGGATTTCGGCACCAATTCTTACACGCGTTCTCACGCCCGGCCAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGGATTTCGGCACCAATTCTTACACGCGTTCTCACGCCCGGCCAGGA  50

seq1  AAGAACACAACAAACCAGAATCTTCTGCGGCAAAACTTTATTGCTTACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACACAACAAACCAGAATCTTCTGCGGCAAAACTTTATTGCTTACAT  100

seq1  CTTCAGGAGCAGGAGCGCAAAACCCCAAGCCCCAAAAACGAAAGCCACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGGAGCAGGAGCGCAAAACCCCAAGCCCCAAAAACGAAAGCCACCC  150

seq1  CAAATACATCTTTAGGAGCCAGAGCGCCAGCGCGCAGAGCGCAAAAGCGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACATCTTTAGGAGCCAGAGCGCCAGCGCGCAGAGCGCAAAAGCGC  200

seq1  AAGCAAGAGCTCTATTGTTTACATCTTTAGGAGCCAGAAGCCAGCGCGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGAGCTCTATTGTTTACATCTTTAGGAGCCAGAAGCCAGCGCGCG  250

seq1  CCAGTGCGCCAGAGCGAAGAGTGCAAGTAAGAGAAGAGAATGGCGGAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGCGCCAGAGCGAAGAGTGCAAGTAAGAGAAGAGAATGGCGGAAAC  300

seq1  CCCGTCCCCTTTAAGGAGGAGTTATCCTTCGCTTAGGACGCATCACTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTCCCCTTTAAGGAGGAGTTATCCTTCGCTTAGGACGCATCACTCCC  350

seq1  TGATTGGCTGCAGCCCATGGCCGAGTAAAGGCAGAGTACATGTAGTGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGGCTGCAGCCCATGGCCGAGTAAAGGCAGAGTACATGTAGTGGTA  400

seq1  AAATACCCTTGGCACATGCGCAGATTATTTGTTTACCACTTAGAACACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCCTTGGCACATGCGCAGATTATTTGTTTACCACTTAGAACACAG  450

seq1  GATGTCAGCGCCATCTTGTGACGGCGAATGTGGGGGCGGCTCCCAACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCAGCGCCATCTTGTGACGGCGAATGTGGGGGCGGCTCCCAACAAA  500

seq1  TAAATATATGCATATCAACTTTATCATTCTATTGAGAGGTTGGCAAGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATATGCATATCAACTTTATCATTCTATTGAGAGGTTGGCAAGATT  550

seq1  GTTGTACACAACATGATGTCAAAATAAGTAAATGAAAATCATGTTTATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTACACAACATGATGTCAAAATAAGTAAATGAAAATCATGTTTATGA  600

seq1  ATGATAAAACAAGGAATATGATAAAGTTAAGCATTCACATAAAAATTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAAAACAAGGAATATGATAAAGTTAAGCATTCACATAAAAATTTTA  650

seq1  CAAAGTTTAACAGTTGTTTCTGTTGTCAATATTTGTAAATGAAAATTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTTAACAGTTGTTTCTGTTGTCAATATTTGTAAATGAAAATTTAA  700

seq1  AAATCTGTGATCAATGAGAAGTACTAGCTATGCATATGACTAAAGTTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGTGATCAATGAGAAGTACTAGCTATGCATATGACTAAAGTTCAT  750

seq1  ATGTTGAAATCTTGTTTCCAACATGTTACACTAGTG-AGAAATTAT-GGA  798
      |||||||||||||||||||||||||||||||||||| ||||||||| |||
seq2  ATGTTGAAATCTTGTTTCCAACATGTTACACTAGTGAAGAAATTATGGGA  800

seq1  ATTTTA-GAAGGTAGAATCCCCACATTTATAGATGATTAGCATTTAATGG  847
      |||||| ||||||||||||||||||||||||||||||||||| |||||||
seq2  ATTTTAGGAAGGTAGAATCCCCACATTTATAGATGATTAGCA-TTAATGG  849

seq1  TTGATCAAGAGGTG-ATATCATTTTATTAAGTGGTGTAGCC  887
      |||||| ||| ||| |||||||||   ||||||||||||||
seq2  TTGATC-AGAAGTGAATATCATTT--ATAAGTGGTGTAGCC  887


seq1: chr8_103309531_103310547
seq2: B6Ng01-182N03.g_64_1086 (reverse)

seq1  TGAATATAAGATGTTACATCCATATTTCCTTCTAATTAAGTTAAATAATT  50
      |||||||| |||| |||||||||||||||||||||| |||| || |||| 
seq2  TGAATATAGGATG-TACATCCATATTTCCTTCTAATAAAGTAAATTAATA  49

seq1  ACTTATTAATGAATATACTTTACTTGAAA-TCTTTGACTTTTAGGTGTCA  99
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ACTTATTAATGAATATACTTTACTTGAAATTCTTTGACTTTTAGGTGTCA  99

seq1  CAAAA--TTATATTTATG-ATGAATATATTGAGACTGCTTTATA-TATAA  145
      |||||  ||||||||||| ||||||||||||||||||||||||| |||||
seq2  CAAAAATTTATATTTATGAATGAATATATTGAGACTGCTTTATATTATAA  149

seq1  -CCAAATATACATATTCAATATGTCAT-AGTCATTTCTGCTTTTGCTTGT  193
       |||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CCCAAATATACATATTCAATATGTCATAAGTCATTTCTGCTTTTGCTTGT  199

seq1  AGTGTTTCTGTTAATGGTGAGACTCGTTGGGAACATGCGTGGGCAGCAGT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTCTGTTAATGGTGAGACTCGTTGGGAACATGCGTGGGCAGCAGT  249

seq1  GCTTTGAAAACAGTGGAATGAAGTGAAAAGAGGAAATGCATGATGATGAG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGAAAACAGTGGAATGAAGTGAAAAGAGGAAATGCATGATGATGAG  299

seq1  CAGAGGACATTAGACCAAAATTATGAAAGATGATTTAAATCAAGATAAAA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGACATTAGACCAAAATTATGAAAGATGATTTAAATCAAGATAAAA  349

seq1  CTATTGGGATTTACATTGTAAGCCAAGAAGACAATTACATGTCTATGAAT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGGGATTTACATTGTAAGCCAAGAAGACAATTACATGTCTATGAAT  399

seq1  TTACTGAGTATGAAAAGGAATGAAGAGAAAAAAAATCACTTTTGAAATAG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGAGTATGAAAAGGAATGAAGAGAAAAAAAATCACTTTTGAAATAG  449

seq1  TTTGCTGAAAATAAAGGTGGAATAGGAAATAAATAAATAAATAAACAAAT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGAAAATAAAGGTGGAATAGGAAATAAATAAATAAATAAACAAAT  499

seq1  AAATAAATAAATAAATAAATTGAGGCTCATCTTTGGTCAATGATAGGCAG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATAAATAAATAAATTGAGGCTCATCTTTGGTCAATGATAGGCAG  549

seq1  TGAAGTCTGGACCATAATAGAAGAGGATACTATTATATTTGGATTTAAGT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTCTGGACCATAATAGAAGAGGATACTATTATATTTGGATTTAAGT  599

seq1  TTCTAGTTTTGAAAATCGTAATAAAGAATTCTTAATGACTATATTTGCCT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTTTTGAAAATCGTAATAAAGAATTCTTAATGACTATATTTGCCT  649

seq1  AATGACTGGCAGAAAAGAAATGCACATATCTCTTAAATTGAAGCTTTCTT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTGGCAGAAAAGAAATGCACATATCTCTTAAATTGAAGCTTTCTT  699

seq1  ACAAATTTAGGCTAAATTTTGGCTACTGGTAGATTTCAGGCCAAGAACTA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATTTAGGCTAAATTTTGGCTACTGGTAGATTTCAGGCCAAGAACTA  749

seq1  CACTAAAAGGAATTGTCTGTGAATATTGTGTACAGAAGTCCATGAAATTC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAAAGGAATTGTCTGTGAATATTGTGTACAGAAGTCCATGAAATTC  799

seq1  GGAAGATATATTCACCTTCAGTTTGAAAGTAAGCCCTGGCAGTTCACATA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATATATTCACCTTCAGTTTGAAAGTAAGCCCTGGCAGTTCACATA  849

seq1  AATTACAAGCACAGACAAATTATATTATCCTCCAGAATTACATTTCAATC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACAAGCACAGACAAATTATATTATCCTCCAGAATTACATTTCAATC  899

seq1  AGCCATTCAAATGTGGAAAAAAAGTGAAAAATCAGGAATTACTAGATCTC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTCAAATGTGGAAAAAAAGTGAAAAATCAGGAATTACTAGATCTC  949

seq1  TGGTAGGGAATACTTGATTTGAAATTCCCTTTTTAATACCTAGGCAATAG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGGGAATACTTGATTTGAAATTCCCTTTTTAATACCTAGGCAATAG  999

seq1  AAATCTGAATGTCTCCTTGAATTC  1017
      ||||||||||||||||||||||||
seq2  AAATCTGAATGTCTCCTTGAATTC  1023


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