BAC Information

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BAC

Clone NameB6Ng01-182O05
Chromosome8 (Build37)
Map Location 115,827,442 - 115,979,473
singlet/doubletdoublet
Overlap genenone
Upstream geneCntnap4, LOC100042061
Downstream geneMon1b, 4930481F22Rik, Adamts18, Nudt7, AI427515, Clec3a, Wwox
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182O05.bB6Ng01-182O05.g
ACCGA008658GA008659
length1,1611,076
definitionB6Ng01-182O05.b B6Ng01-182O05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,827,442 - 115,828,611)(115,978,383 - 115,979,473)
sequence
gaattctctgcctaagactcatcacagcagagaggctcatctggcagcca
tctggctgattgggaatatcccgattcatttagagctatccttgatcgct
ggaaactttgtcgcctgctcatcatgcacgtactcagcacggctctgtgc
ttgcttggtgacaggcagtggatcaggagccaagaaaaaattatgagtct
aggctatgctggagtcctacctctgcacctctcttctagattattctttc
ccttctaccttatagttcacgttctatacagatgctctgtgatcaaaaag
tgctattgtttagataccaacacccctaccaagtgcctttgttctgcttc
cagatcaaataaagtattccaatttagttgccattgaagataaagaggaa
tgatcaaagacacaaagagacttatttactccaaattaaaagcacaatag
atcaagtagtgctttgttttataggtaatttcatgactaaaaccacaccg
taataatatagtttggaaccgcttcctacacatcacaccattgtgtctca
gaaatagaatttttctaaaatgtattttattcttatatgaagtattattc
ataattgcagtatgttttaatctgtaattcttttttttttcaaacagtgg
acatgaaagctctataatgcaatacacagggggcccaataagtgctatat
tttggggttgacatactaaataactgcatttttaaagaaatgaacatata
cacctttgtatacgtatccatctatctataaataatctgtacacagttta
agtttctaaagaatggcagacaatatatcattgcccctaaatatgctttt
gaatagtgctataaaaaaatcaccaagtgttccaagtagataagaacttt
gctgacatttattgccctgttgtatgtatactgtgcttatagagagagag
gatccatttgcaggtagatccagtttttaataggttcctttaacttccct
ttgagagctgagagatgctcagtggttaggagtcccttcttgcacttcag
aggacctacctgaagtttgtcgccagccaccccacacttgaacagctcac
aaatacttgtaactactcttcaggatccaggtgttctttcgactgtggtt
aactgcatgca

gaattcactcatggcaactaatataaaattacaaatcaatactgaattgg
aaatagagagtattattgcttggtgagccaatgaatattggtcatgcaaa
aaaaaaattaaacatgaggtacgattttaattcattttaattaggcctgt
attctaaatatcatttgccttacgttgactgcatttctttctatgagcat
cagcccgttgcatatcttcaagtgttagattcttggataaatccaagcta
tttcagttgtgcgaattaatcacctgtgagaaaatacacaaaggaaaata
catcttcctgttcttcttctctcttcagtgcaaacacggctggccacgta
tttatttggggaagtgctgtgaggttatttcttcctgatgaaaagcaaag
atgcgggagacagctgaaagcccgagcaggctgcatcttgagatggccag
gctgctgagaaaaatagcttattgctttttgaattgccttatatttcctc
caaattcttaaacaggcctcggagagcaatccgtcggttgtctctcaaaa
ctggctacctgaagaaatgctgattttgtttttcagtgaaagttgcaaga
gttggagaagatgatctaggattttggtcttgctggtctgagtcaccagc
ccgcagacttctctagttaaatgcaatgccaaggagctctgaacaggtat
aggaaaaacaattcagtttgatcattctcttcttgtaactttctgggttc
gattcatttttttttccttgggttcttctccacttttagtggctcattta
ttcttttcattttgtttgggtcaatttccctcttacagtccaatccaatc
tcgtccatctaatccaatctagttaaataagtattcatgatgtcacctgc
cccctgttcccttcacaaagaaaatcagacaggaactcacacaagtttga
gtcctgagtattggaactattttatttgctgtgtccagtctttctttctt
ctagtaaatcaggtgtcacccccctaactggctgcatatcagcgacctgt
gttgggaacccaatccgtcgtttgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_115827442_115828611
seq2: B6Ng01-182O05.b_45_1205

seq1  GAATTCTCTGCCTAAGACTCATCACAGCAGAGAGGCTCATCTGGCAGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCCTAAGACTCATCACAGCAGAGAGGCTCATCTGGCAGCCA  50

seq1  TCTGGCTGATTGGGAATATCCCGATTCATTTAGAGCTATCCTTGATCGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTGATTGGGAATATCCCGATTCATTTAGAGCTATCCTTGATCGCT  100

seq1  GGAAACTTTGTCGCCTGCTCATCATGCACGTACTCAGCACGGCTCTGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACTTTGTCGCCTGCTCATCATGCACGTACTCAGCACGGCTCTGTGC  150

seq1  TTGCTTGGTGACAGGCAGTGGATCAGGAGCCAAGAAAAAATTATGAGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGGTGACAGGCAGTGGATCAGGAGCCAAGAAAAAATTATGAGTCT  200

seq1  AGGCTATGCTGGAGTCCTACCTCTGCACCTCTCTTCTAGATTATTCTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTATGCTGGAGTCCTACCTCTGCACCTCTCTTCTAGATTATTCTTTC  250

seq1  CCTTCTACCTTATAGTTCACGTTCTATACAGATGCTCTGTGATCAAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTACCTTATAGTTCACGTTCTATACAGATGCTCTGTGATCAAAAAG  300

seq1  TGCTATTGTTTAGATACCAACACCCCTACCAAGTGCCTTTGTTCTGCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATTGTTTAGATACCAACACCCCTACCAAGTGCCTTTGTTCTGCTTC  350

seq1  CAGATCAAATAAAGTATTCCAATTTAGTTGCCATTGAAGATAAAGAGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCAAATAAAGTATTCCAATTTAGTTGCCATTGAAGATAAAGAGGAA  400

seq1  TGATCAAAGACACAAAGAGACTTATTTACTCCAAATTAAAAGCACAATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAAAGACACAAAGAGACTTATTTACTCCAAATTAAAAGCACAATAG  450

seq1  ATCAAGTAGTGCTTTGTTTTATAGGTAATTTCATGACTAAAACCACACCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTAGTGCTTTGTTTTATAGGTAATTTCATGACTAAAACCACACCG  500

seq1  TAATAATATAGTTTGGAACCGCTTCCTACACATCACACCATTGTGTCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATATAGTTTGGAACCGCTTCCTACACATCACACCATTGTGTCTCA  550

seq1  GAAATAGAATTTTTCTAAAATGTATTTTATTCTTATATGAAGTATTATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGAATTTTTCTAAAATGTATTTTATTCTTATATGAAGTATTATTC  600

seq1  ATAATTGCAGTATGTTTTAATCTGTAATTCTTTTTTTTTTCAAACAGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTGCAGTATGTTTTAATCTGTAATTCTTTTTTTTTTCAAACAGTGG  650

seq1  ACATGAAAGCTCTATAATGCAATACACA-GGGGCCCAATAAGTGCTATAT  699
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ACATGAAAGCTCTATAATGCAATACACAGGGGGCCCAATAAGTGCTATAT  700

seq1  TTTGGGGTTGACATACTAAATAACTGCATTTTTAAAGAAATGAACATATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGTTGACATACTAAATAACTGCATTTTTAAAGAAATGAACATATA  750

seq1  CACCTTTGTATACGTATCCATCTATCTATAAATAATCTGTACACAGTTTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTTGTATACGTATCCATCTATCTATAAATAATCTGTACACAGTTTA  800

seq1  AGTTTCTAAAGAATGGCAGACAATATATCATTGCCCCTAAATATGCTTTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTAAAGAATGGCAGACAATATATCATTGCCCCTAAATATGCTTTT  850

seq1  GAATAGTGCTATAAAAAAATCACCAAGTGTTCCAAGTAGATAAGAACTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGTGCTATAAAAAAATCACCAAGTGTTCCAAGTAGATAAGAACTTT  900

seq1  GCTGACATTTATTGCCCTGTTGTATGTAATACTGTGCTTATAGAGAGAAG  949
      ||||||||||||||||||||||||||| ||||||||||||||||||| ||
seq2  GCTGACATTTATTGCCCTGTTGTATGT-ATACTGTGCTTATAGAGAG-AG  948

seq1  AGGATCCATTTGCAGGTAGATCCAGTTTTTAATAGGTTCCTTTAACTTCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCCATTTGCAGGTAGATCCAGTTTTTAATAGGTTCCTTTAACTTCC  998

seq1  CTTTGAGAGGCTGAAGAGATGGCTCAGTGGTTAGGAGT-CCTTCTTGCAC  1048
      |||||||| |||| |||||| ||||||||||||||||| |||||||||||
seq2  CTTTGAGA-GCTG-AGAGAT-GCTCAGTGGTTAGGAGTCCCTTCTTGCAC  1045

seq1  TTCCAGAGGACCTACCTG-AGTTTGTTCGCCAGC--ACCCACAC-TGAAC  1094
      || ||||||||||||||| |||||| ||||||||   ||||||| |||||
seq2  TT-CAGAGGACCTACCTGAAGTTTG-TCGCCAGCCACCCCACACTTGAAC  1093

seq1  AGCTCACAATTAACTGTAACTACATCTTCAAGGAATCCA-GTGTTCTTTT  1143
      ||||||||| ||  ||||||||| ||||||  | ||||| ||||||||| 
seq2  AGCTCACAAATACTTGTAACTAC-TCTTCA--GGATCCAGGTGTTCTTT-  1139

seq1  CTGAACTGTGTGGGTAACATGCATGCA  1170
        ||    ||||| |||| ||||||||
seq2  -CGA---CTGTGGTTAAC-TGCATGCA  1161


seq1: chr8_115978383_115979473
seq2: B6Ng01-182O05.g_66_1141 (reverse)

seq1  TGCAAACGGACCGGATGGGGTCCCAACACAGGTCGCTGGAATTGGTGCCA  50
      ||||||| ||| |  |||| ||||||||||||||||||  ||      ||
seq2  TGCAAAC-GACGGATTGGGTTCCCAACACAGGTCGCTGATAT-----GCA  44

seq1  GGCAGGTAAGGGGGTGACACCTTGAATTTAACTAGAAAGAAAGAAAGACT  100
      | ||| || |||||||||||| |||  || ||||| ||||||||||||||
seq2  GCCAGTTAGGGGGGTGACACC-TGA--TTTACTAG-AAGAAAGAAAGACT  90

seq1  GGACACAGCAAATTAAAATAAGTTCCAATACTCAGGACTCAAAC-TGTGT  149
      |||||||||||| |||||| |||||||||||||||||||||||| |||||
seq2  GGACACAGCAAA-TAAAAT-AGTTCCAATACTCAGGACTCAAACTTGTGT  138

seq1  GAGTTCCTGTCTGATTTTCTTTGTGAAGGGAAACAGGGGGCAGGTTGACA  199
      |||||||||||||||||||||||||||||| ||||||||||||| |||||
seq2  GAGTTCCTGTCTGATTTTCTTTGTGAAGGG-AACAGGGGGCAGG-TGACA  186

seq1  TCATGAATACTTATTTAACTAGATTGGATTAGATGGGACGAGATTGGATT  249
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCATGAATACTTATTTAACTAGATTGGATTAGAT-GGACGAGATTGGATT  235

seq1  GGACTGTAAGAGGGAAATTGACCCAAACAAAATGAAAAGAATAAATGAGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGTAAGAGGGAAATTGACCCAAACAAAATGAAAAGAATAAATGAGC  285

seq1  CACTAAAAGTGGAGAAGAACCCAAGGAAAAAAAAATGAATCGAACCCAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAAAGTGGAGAAGAACCCAAGGAAAAAAAAATGAATCGAACCCAGA  335

seq1  AAGTTACAAGAAGAGAATGATCAAACCTGAATTGTTTTTCCTATACCTGT  399
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAGTTACAAGAAGAGAATGATCAAA-CTGAATTGTTTTTCCTATACCTGT  384

seq1  TCAGAGCTCCTTGGCATTGCATTTAACTAGAGAAGTCTGCGGGCTGGTGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGCTCCTTGGCATTGCATTTAACTAGAGAAGTCTGCGGGCTGGTGA  434

seq1  CTCAGACCAGCAAGACCAAAATCCTAGATCATCTTCTCCAACTCTTGCAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACCAGCAAGACCAAAATCCTAGATCATCTTCTCCAACTCTTGCAA  484

seq1  CTTTCACTGAAAAACAAAATCAGCATTTCTTCAGGTAGCCAGTTTTGAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACTGAAAAACAAAATCAGCATTTCTTCAGGTAGCCAGTTTTGAGA  534

seq1  GACAACCGACGGATTGCTCTCCGAGGCCTGTTTAAGAATTTGGAGGAAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACCGACGGATTGCTCTCCGAGGCCTGTTTAAGAATTTGGAGGAAAT  584

seq1  ATAAGGCAATTCAAAAAGCAATAAGCTATTTTTCTCAGCAGCCTGGCCAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGCAATTCAAAAAGCAATAAGCTATTTTTCTCAGCAGCCTGGCCAT  634

seq1  CTCAAGATGCAGCCTGCTCGGGCTTTCAGCTGTCTCCCGCATCTTTGCTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGATGCAGCCTGCTCGGGCTTTCAGCTGTCTCCCGCATCTTTGCTT  684

seq1  TTCATCAGGAAGAAATAACCTCACAGCACTTCCCCAAATAAATACGTGGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCAGGAAGAAATAACCTCACAGCACTTCCCCAAATAAATACGTGGC  734

seq1  CAGCCGTGTTTGCACTGAAGAGAGAAGAAGAACAGGAAGATGTATTTTCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCGTGTTTGCACTGAAGAGAGAAGAAGAACAGGAAGATGTATTTTCC  784

seq1  TTTGTGTATTTTCTCACAGGTGATTAATTCGCACAACTGAAATAGCTTGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTATTTTCTCACAGGTGATTAATTCGCACAACTGAAATAGCTTGG  834

seq1  ATTTATCCAAGAATCTAACACTTGAAGATATGCAACGGGCTGATGCTCAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCCAAGAATCTAACACTTGAAGATATGCAACGGGCTGATGCTCAT  884

seq1  AGAAAGAAATGCAGTCAACGTAAGGCAAATGATATTTAGAATACAGGCCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAATGCAGTCAACGTAAGGCAAATGATATTTAGAATACAGGCCT  934

seq1  AATTAAAATGAATTAAAATCGTACCTCATGTTTAATTTTTTTTTTGCATG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAATGAATTAAAATCGTACCTCATGTTTAATTTTTTTTTTGCATG  984

seq1  ACCAATATTCATTGGCTCACCAAGCAATAATACTCTCTATTTCCAATTCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATATTCATTGGCTCACCAAGCAATAATACTCTCTATTTCCAATTCA  1034

seq1  GTATTGATTTGTAATTTTATATTAGTTGCCATGAGTGAATTC  1091
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGATTTGTAATTTTATATTAGTTGCCATGAGTGAATTC  1076


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