BAC Information

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BAC

Clone NameB6Ng01-182P24
Chromosome8 (Build37)
Map Location 78,946,257 - 78,947,249
singlet/doubletsinglet
Overlap genenone
Upstream gene1700007B14Rik, LOC666036, LOC100039185, EG631594, LOC666226
Downstream geneLOC100039211, LOC384847, Nr3c2, Arhgap10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182P24.bB6Ng01-182P24.g
ACCGA008741GA008742
length985996
definitionB6Ng01-182P24.b B6Ng01-182P24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatcctttattcttgcacaagaatacttgtataaccatttgttt
acccattcatttgttaagggacaatctggcattattgtctattaagttat
taaagtgaagtttccataaactgtgtgaaggttttctgggaacctaagtt
tatcttctctgaagtaaaagactagtagggggtatggagatataactctg
caggtaagatgcagttctgctcttccagaggaccttagagagtttattac
ctagcacctacgtcaggtagctcataaccatctgtaactcaaggtcaatt
tatgcatgcacacatggcatacattcataacacacacacacacacacaca
cacacacacacacacacacacacacacacagaggaacctaaatcagactt
tgaaaaagacaaaaaatgaccaaacatatgtaaggtcaatatatctttat
ttttttcatgggcaatgccagactgttttctatagagtgatgctgatgta
tactagcagcagcatggggaggatccacctgtgatttcttcataggctta
tctgcatttggtttgggctgactacttgctatttcagcaagtctgatagg
aatatagtgcagtgctcatctgggttcccaagggaatcatgattctgatt
gtctcttcctatgctgattgctatctgttctcttgacagttaaagtctgt
ttatggcctttactcatttttctgattgggattgtttatagtttttactg
tttaagtttgtgagaactttttatatatattttcagataccagttatttc
ccaaataaataaccatcaaatatattcttctagtctttcctccctttcct
tttttaaaaagaaaaaaaattgaattttctggacactattgtgatattgc
atctagtgaggatcaggaagaaaacattttatgtcttgtttgtttaaaga
tagtcattcaatattaattttttaagaacattgtg
gaattcctttcatgatgaaaatccagatatagccaccttgattagatctg
accattgatcttcacttgtgcaaatacacccaacaatgcagcctatgtac
aaatctgtgaaattatggactacttcatcatggcccttctatgggaatgg
gcagggctttgcattttccattttatagatcaaatggctctggtaaaaac
tcattaaaaacaacaacaaaaatcagaaaaaaagaatgtcaagacacagt
ggaatgttgccattccttttctttcctctagggggcaggaagcatagctt
tgcatcataagcactgaatcacagctgctactgggactgcttaggaaaca
tggtggaatcccttaaaaataaaggtggttaaaatccatcagggaagttc
attgtttgggtagattcacattaaagttaatcacagactcttaattatta
atacaggtggctgaaattaccttcgatacataacaaatgttaaataattt
ccttaaaacttcatttcattttgtacatgaagacatagcctccaaaactt
ctttcacaaaatggggagcagttctttcaagctaatgtattatttctgcg
caatttccatcgtgaacaaagcatattaatgcattcattcaccatctgtg
tccattggttccacagccagttaccctacaggactaaggcaccctctttt
gtgatagtcacttgaacaataacagggactcccagtgaacaatatgaggt
ctgcatgctgtgcagatggaagaccaatgaatagaaaagcattgcagcgt
cagcatttttgcccagaattgtcagcctgaggaataagataggcacccag
aaactaccttcaacaaacactacttttatctttagcatttcattcgtacc
aacaaagaaactcgtcagttcacttcagtacccttttcttggggaacacc
cattgcacactgtactcatgtgtgcagtgtgcagtccttcagcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_78946257_78947249
seq2: B6Ng01-182P24.g_64_1059

seq1  GAATTCCTTTCATGATGAAAATCCAGATATAGCCACCTTGATTAGATCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTCATGATGAAAATCCAGATATAGCCACCTTGATTAGATCTG  50

seq1  ACCATTGATCTTCACTTGTGCAAATACACCCAACAATGCAGCCTATGTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTGATCTTCACTTGTGCAAATACACCCAACAATGCAGCCTATGTAC  100

seq1  AAATCTGTGAAATTATGGACTACTTCATCATGGCCCTTCTATGGGAATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGTGAAATTATGGACTACTTCATCATGGCCCTTCTATGGGAATGG  150

seq1  GCAGGGCTTTGCATTTTCCATTTTATAGATCAAATGGCTCTGGTAAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGCTTTGCATTTTCCATTTTATAGATCAAATGGCTCTGGTAAAAAC  200

seq1  TCATTAAAAACAACAACAAAAATCAGAAAAAAAGAATGTCAAGACACAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAAAAACAACAACAAAAATCAGAAAAAAAGAATGTCAAGACACAGT  250

seq1  GGAATGTTGCCATTCCTTTTCTTTCCTCTAGGGGGCAGGAAGCATAGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTTGCCATTCCTTTTCTTTCCTCTAGGGGGCAGGAAGCATAGCTT  300

seq1  TGCATCATAAGCACTGAATCACAGCTGCTACTGGGACTGCTTAGGAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCATAAGCACTGAATCACAGCTGCTACTGGGACTGCTTAGGAAACA  350

seq1  TGGTGGAATCCCTTAAAAATAAAGGTGGTTAAAATCCATCAGGGAAGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGAATCCCTTAAAAATAAAGGTGGTTAAAATCCATCAGGGAAGTTC  400

seq1  ATTGTTTGGGTAGATTCACATTAAAGTTAATCACAGACTCTTAATTATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTGGGTAGATTCACATTAAAGTTAATCACAGACTCTTAATTATTA  450

seq1  ATACAGGTGGCTGAAATTACCTTCGATACATAACAAATGTTAAATAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGTGGCTGAAATTACCTTCGATACATAACAAATGTTAAATAATTT  500

seq1  CCTTAAAACTTCATTTCATTTTGTACATGAAGACATAGCCTCCAAAACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAAACTTCATTTCATTTTGTACATGAAGACATAGCCTCCAAAACTT  550

seq1  CTTTCACAAAATGGGGAGCAGTTCTTTCAAGCTAATGTATTATTTCTGCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACAAAATGGGGAGCAGTTCTTTCAAGCTAATGTATTATTTCTGCG  600

seq1  CAATTTCCATCGTGAACAAAGCATATTAATGCATTCATTCACCATCTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTCCATCGTGAACAAAGCATATTAATGCATTCATTCACCATCTGTG  650

seq1  TCCATTGGTTCCACAGCCAGTTACCCTACAGGACTAAGGCACCCTCTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGGTTCCACAGCCAGTTACCCTACAGGACTAAGGCACCCTCTTTT  700

seq1  GTGATAGTCACTTGAACAATAACAGGGACTCCCAGTGAACAATATGAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAGTCACTTGAACAATAACAGGGACTCCCAGTGAACAATATGAGGT  750

seq1  CTGCATGCTGTGCAGATGGAAGACCAATGAATAGAAAAGCATTGCAGCGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATGCTGTGCAGATGGAAGACCAATGAATAGAAAAGCATTGCAGCGT  800

seq1  CAGCA-TTTTGCCCAGAATTGTCAGCCTGAGGAATAAGATAGGCACCCAG  849
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTTTTGCCCAGAATTGTCAGCCTGAGGAATAAGATAGGCACCCAG  850

seq1  -AACTACC-TCAACAAACACTACTTTTATC-TTAGCATTTCATTCGTACC  896
       ||||||| ||||||||||||||||||||| |||||||||||||||||||
seq2  AAACTACCTTCAACAAACACTACTTTTATCTTTAGCATTTCATTCGTACC  900

seq1  AACAAAGAAACTCGTCAGTTCACTTCAGTACCC-TTTCTTGGGGAACACC  945
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AACAAAGAAACTCGTCAGTTCACTTCAGTACCCTTTTCTTGGGGAACACC  950

seq1  CAATTGCACACTGGTACTCATGTGTGCAGTGTGCAGTCCTTCAGCAGC  993
      | |||||||||| |||||||||||||||||||||||||||||||||||
seq2  C-ATTGCACACT-GTACTCATGTGTGCAGTGTGCAGTCCTTCAGCAGC  996