BAC Information

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BAC

Clone NameB6Ng01-183L12
Chromosome8 (Build37)
Map Location 120,276,971 - 120,447,424
singlet/doubletdoublet
Overlap geneHsd17b2, Mphosph6
Upstream geneLOC100043053, 2310061C15Rik, 2610510J17Rik, BC060631, 1700030J22Rik, Gcsh, Pkd1l2, Bcmo1, Gan, 4933407C03Rik, Plcg2, 4632417N05Rik
Downstream geneCdh13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183L12.bB6Ng01-183L12.g
ACCGA009273GA009274
length722925
definitionB6Ng01-183L12.b B6Ng01-183L12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,276,971 - 120,277,692)(120,446,508 - 120,447,424)
sequence
gaattcagaaatctgcctgcctctgcctcccaagtgctgggattaaaggc
atgtgtcaccaccgcccggccaaaccctgtttttttttttttttaatctc
ccattctttccataggcacggttccacttcaaatgacatcagcttatgca
gccacaaaggcagctctaaccatgttctcaacaatcatcagacaggagct
tgacaaatggggagttaaagttgtgaccatcaaacccggaggcttcaaaa
caagtaggtatccgagcccaagagctctgtaactgtcactttgagaggca
ccccgcgagatgttcgtctccatcggttatgactccactgaaccttccag
ggttgtcagaggtgaagacacacaggcattgggagtgaagactcatttga
ttgagtaggagctaagttttgaagctgatcatgttgggtgttttaaatag
tttatttttaatttatttttatttatgtgtgtaaacatgtgtctgtttgt
gtgtgcatgcacataggtgcaggtgtgtgggaggccagaagaagatgctg
gatcctctggagctgaaattataggcagttgtaagccaccctatgtcagt
gctagggactgaactctggccgtctgcaatagcagcaagaactcttaact
gcagagcgatcccactctctggccccaacttggatgtttgaatggggcgg
gagggcggggggaatggggaga
gaattcagcagcgctcagctgtgccccatgacgaagtgaatgaagaattt
aaaggcacccaaaccccatctctccctcccctctgatctctgttagtgtt
tcccattggccagaaacagtgaggaaccaaggcaagagatccagcagacg
gatccaaagcggtatgtgtgagcctgccagcttaatgcggagtgcaaatc
ggagacatccaaaggggaaaggaaaccaagggacgtcccaggagctttta
tgcctgagaccgcgtctagcagaggaattaaaaaacttcttttgattgat
gtgctctatttcattgcaaaggctaccatactctgatactagcatactca
gatgtcggagtagcctcccccctggaaaacagaagccactttggagtgat
cagagcgtcagagttgagcaagtcttttcagagcctctctggggcaacac
ataaacatcggtgctggcacttccagacaccatagtcataagacaatgtc
actttccacattgccaggtctctgccgtcgtgagccccacagacacctcg
ctccccactcctcagccacctgggggttctctgtgatcagttctccattc
ccctattcggtgggtatcaatcctaatgaaccccatccataatgggtcct
ctccatgacaaggggtaggaaatccctgcatgggatggaaacacggatgt
ccacacagtgacctgcttagacgtgcttctttagaagcacgtccccaatg
gaaaccaccagcacccagggtcaaagggcacagaggcagtgaaaagaccg
aaggagtagcccacaagaggaggaacgagggtggggaaagagggggagag
tgtgtgtcgcttccttcctttaattggtagcgatgccccactggaaaggg
tgtaaagaaaatcttcttatgcccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_120276971_120277692
seq2: B6Ng01-183L12.b_44_765

seq1  GAATTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGC  50

seq1  ATGTGTCACCACCGCCCGGCCAAACCCTGTTTTTTTTTTTTTTTAATCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCACCACCGCCCGGCCAAACCCTGTTTTTTTTTTTTTTTAATCTC  100

seq1  CCATTCTTTCCATAGGCACGGTTCCACTTCAAATGACATCAGCTTATGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTTTCCATAGGCACGGTTCCACTTCAAATGACATCAGCTTATGCA  150

seq1  GCCACAAAGGCAGCTCTAACCATGTTCTCAACAATCATCAGACAGGAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAAAGGCAGCTCTAACCATGTTCTCAACAATCATCAGACAGGAGCT  200

seq1  TGACAAATGGGGAGTTAAAGTTGTGACCATCAAACCCGGAGGCTTCAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAATGGGGAGTTAAAGTTGTGACCATCAAACCCGGAGGCTTCAAAA  250

seq1  CAAGTAGGTATCCGAGCCCAAGAGCTCTGTAACTGTCACTTTGAGAGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAGGTATCCGAGCCCAAGAGCTCTGTAACTGTCACTTTGAGAGGCA  300

seq1  CCCCGCGAGATGTTCGTCTCCATCGGTTATGACTCCACTGAACCTTCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGCGAGATGTTCGTCTCCATCGGTTATGACTCCACTGAACCTTCCAG  350

seq1  GGTTGTCAGAGGTGAAGACACACAGGCATTGGGAGTGAAGACTCATTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTCAGAGGTGAAGACACACAGGCATTGGGAGTGAAGACTCATTTGA  400

seq1  TTGAGTAGGAGCTAAGTTTTGAAGCTGATCATGTTGGGTGTTTTAAATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTAGGAGCTAAGTTTTGAAGCTGATCATGTTGGGTGTTTTAAATAG  450

seq1  TTTATTTTTAATTTATTTTTATTTATGTGTGTAAACATGTGTCTGTTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTTAATTTATTTTTATTTATGTGTGTAAACATGTGTCTGTTTGT  500

seq1  GTGTGCATGCACATAGGTGCAGGTGTGTGGGAGGCCAGAAGAAGATGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCATGCACATAGGTGCAGGTGTGTGGGAGGCCAGAAGAAGATGCTG  550

seq1  GATCCTCTGGAGCTGAAATTATAGGCAGTTGTAAGCCACCCTATGTCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTCTGGAGCTGAAATTATAGGCAGTTGTAAGCCACCCTATGTCAGT  600

seq1  GCTAGGGACTGAACTCTGGCCGTCTGCAATAGCAGCAAGAACTCTTAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGGACTGAACTCTGGCCGTCTGCAATAGCAGCAAGAACTCTTAACT  650

seq1  GCAGAGCGATCCCACTCTCTGGCCCCAACTTGGATGTTTGAATGGGGCGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGCGATCCCACTCTCTGGCCCCAACTTGGATGTTTGAATGGGGCGG  700

seq1  GAGGGCGGGGGGAATGGGGAGA  722
      ||||||||||||||||||||||
seq2  GAGGGCGGGGGGAATGGGGAGA  722

seq1: chr8_120446508_120447424
seq2: B6Ng01-183L12.g_67_991 (reverse)

seq1  CGGGCATCAGATGATTTTCCTT-CACCCTTTCCAGT-GGGCATCGCTGCC  48
      ||||||| ||| ||||||| || ||||||||||||| |||||||||| ||
seq2  CGGGCATAAGAAGATTTTCTTTACACCCTTTCCAGTGGGGCATCGCTACC  50

seq1  AACTACAAGGA--GCAGCGACACACACTCT-CCCCTCTTTCCCCA-CCTC  94
      || || |||||  | ||||||||||||||| |||||||||||||| ||||
seq2  AATTA-AAGGAAGGAAGCGACACACACTCTCCCCCTCTTTCCCCACCCTC  99

seq1  GTTCCTCCTCTTGT-GGCTACTCCTTCGGTC-TTTCACTGCCTCTGTGCC  142
      |||||||||||||| |||||||||||||||| ||||||||||||||||||
seq2  GTTCCTCCTCTTGTGGGCTACTCCTTCGGTCTTTTCACTGCCTCTGTGCC  149

seq1  CTTTGACCCTGGGTGCTGGTGGTTTCCATTGGGGACGTGCTTCT-AAGAA  191
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTTTGACCCTGGGTGCTGGTGGTTTCCATTGGGGACGTGCTTCTAAAGAA  199

seq1  GCACGTCTAAGCAGGTCACTGTGTGGACATCCGTGTTTCCATCCCATGCA  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGTCTAAGCAGGTCACTGTGTGGACATCCGTGTTTCCATCCCATGCA  249

seq1  GGGATTTCCTACCCCTTGTCATGGAGAGGACCCATTATGGATGGGGTTCA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTTCCTACCCCTTGTCATGGAGAGGACCCATTATGGATGGGGTTCA  299

seq1  TTAGGATTGATACCCACCGAATAGGGGAATGGAGAACTGATCACAGAGAA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGATTGATACCCACCGAATAGGGGAATGGAGAACTGATCACAGAGAA  349

seq1  CCCCCAGGTGGCTGAGGAGTGGGGAGCGAGGTGTCTGTGGGGCTCACGAC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAGGTGGCTGAGGAGTGGGGAGCGAGGTGTCTGTGGGGCTCACGAC  399

seq1  GGCAGAGACCTGGCAATGTGGAAAGTGACATTGTCTTATGACTATGGTGT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGACCTGGCAATGTGGAAAGTGACATTGTCTTATGACTATGGTGT  449

seq1  CTGGAAGTGCCAGCACCGATGTTTATGTGTTGCCCCAGAGAGGCTCTGAA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGTGCCAGCACCGATGTTTATGTGTTGCCCCAGAGAGGCTCTGAA  499

seq1  AAGACTTGCTCAACTCTGACGCTCTGATCACTCCAAAGTGGCTTCTGTTT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTGCTCAACTCTGACGCTCTGATCACTCCAAAGTGGCTTCTGTTT  549

seq1  TCCAGGGGGGAGGCTACTCCGACATCTGAGTATGCTAGTATCAGAGTATG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGGGGAGGCTACTCCGACATCTGAGTATGCTAGTATCAGAGTATG  599

seq1  GTAGCCTTTGCAATGAAATAGAGCACATCAATCAAAAGAAGTTTTTTAAT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCTTTGCAATGAAATAGAGCACATCAATCAAAAGAAGTTTTTTAAT  649

seq1  TCCTCTGCTAGACGCGGTCTCAGGCATAAAAGCTCCTGGGACGTCCCTTG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGCTAGACGCGGTCTCAGGCATAAAAGCTCCTGGGACGTCCCTTG  699

seq1  GTTTCCTTTCCCCTTTGGATGTCTCCGATTTGCACTCCGCATTAAGCTGG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCTTTCCCCTTTGGATGTCTCCGATTTGCACTCCGCATTAAGCTGG  749

seq1  CAGGCTCACACATACCGCTTTGGATCCGTCTGCTGGATCTCTTGCCTTGG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTCACACATACCGCTTTGGATCCGTCTGCTGGATCTCTTGCCTTGG  799

seq1  TTCCTCACTGTTTCTGGCCAATGGGAAACACTAACAGAGATCAGAGGGGA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCACTGTTTCTGGCCAATGGGAAACACTAACAGAGATCAGAGGGGA  849

seq1  GGGAGAGATGGGGTTTGGGTGCCTTTAAATTCTTCATTCACTTCGTCATG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGATGGGGTTTGGGTGCCTTTAAATTCTTCATTCACTTCGTCATG  899

seq1  GGGCACAGCTGAGCGCTGCTGAATTC  917
      ||||||||||||||||||||||||||
seq2  GGGCACAGCTGAGCGCTGCTGAATTC  925