BAC Information

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BAC

Clone NameB6Ng01-183L17
Chromosome8 (Build37)
Map Location 75,740,894 - 75,741,927
singlet/doubletsinglet
Overlap geneLarge
Upstream gene2510049I19Rik, Ap1m1, LOC384840, LOC100042405, Klf2, Eps15l1, Calr3, LOC100042421, 1700030K09Rik, Cherp, Slc35e1, Crsp7, LOC100042439, 9130011J15Rik, Tmem38a, Nwd1, Sin3b, F2rl3
Downstream geneLOC100039001, LOC666134, Crry-ps, LOC666146
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183L17.bB6Ng01-183L17.g
ACCGA009283GA009284
length1,2011,034
definitionB6Ng01-183L17.b B6Ng01-183L17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatctcccactatgatggcaatactaatgagtcacttcctccaa
gacaggcattgaaatcacataaataaatagataattcaatattataatag
tactttgatatgcattagctccaaacactcagaatgatcactatatttgc
tattactatcttcattttaaaagctgtaaatcaagaagtaaagagaaaaa
acaagatgtctgacgatgcctgagcaagcatgtggcagaactgatcaatc
cactcaaagatagcatttcaagtaagatttccttattcccaatttctgct
gattctctgccataacacatctcattaactgaaaggtaaacaaaacaaaa
caacaacaacaacaaaaacactacacacccaaaagattcaatattaacaa
taaactctttcctccaagaaaatactttgccagacttttcaaatgcatgc
ttagtactggaacaaggcaacagacaataccctcattaagaattgcctaa
caatgggagccatttttagttagaggtttacttcagtgaacagataccat
gaccaatgcagcacttataaggacaacttttaattgggactggcttatat
gttcagaggttcagtccattatcaccaacgtgggaacacggcagcatcta
ggtaggcatggtgcaggaggagctaagagttctacatcttcatctgaagt
ctgctagccgaatactgacttccatgtagctaggataaaggtcttatagc
ccacatccacagtgataatgaaagacccacaacgtgaggactcccccacg
ttctgactcagaagaggcgtcacctcaaatcactcacaagaaacggtctt
tgatgcaaactgcaagaagacttttattccaagagtgctctgggatttca
cagtcgtacaccatgcaaggggtagaggaccatggggccccaaatagctg
ggacagggggttatttatagggaagaaaccacagctcaaggggggtgtgg
agggcattgttgggaaaataccaaaataccagttaagagtcacaaggaag
cacaagtcacaaggaaaatacctgacaattgtgcagtatttctcagaaca
gtttctatgagcccactaccatagccaatttgcataggcaggttcatgat
gtcaggctggttctttgacaaatcacctccctgaactcccaggagagcaa
g
gaattccacccatcttgtctctgccatacaaaaagcaaagcataagactg
atctgcatttagcaaaagctttcacaaggcacaggagtctagaggtgtgg
ttcaagtgctggcttgcacctgatagctaccctggcaaagccattaagat
atcctgtgccctcagcagtttgatgtgagagtccatggcaattcaagtgc
agctaaaaggatccagggggagaaccaatgaactaaaaaatacactgaag
gggaaataatgtgagacactgagggattaagattaaaattgattggttgt
attttaaccacttacacaaacaaattctagagctagaaagaaatgaatga
cttcttgctctgatagctgtgaatcaggagggaataaacaatatgagttg
tgggctgtacagctgcctcctggcaacttcttagtagagggaaaattact
aaagtggaaaaaatgttatttcacctggagaagagaagtagaaacccctc
tgaattcatcatttgtatgttactactctctataaaccaactatactcat
tgtttaaaaagagactgccctgtgaaaaaactcagttattatacttactc
cacttccttgtcacaagggattaaaatgtggtttaaagatatcaaatgga
aaattctacaaagtagttgtgatggtttgacactgttgacaagtgtaacc
ttgttggagtaggtatggccttgtgggtgtgggctttaatacccttgtcc
taactgtctgggagccactattctgctagcagccttcagatgaagatgta
gaagtctcagctctgcctccactatgcctgcctgaatgtcgccatgtttc
tgtcttgatggtaatggaatggacctctgaccctggaagccagcccaatt
aaatgttgtccttataggacttgtcttgggtcatggtggtgtctgttccc
agcagtaaaaccctaacatgatatatctcagtgatgtgatgaactccaag
ccattccatccctactccagaattttatatgaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_75740894_75741927
seq2: B6Ng01-183L17.g_68_1101

seq1  GAATTCCACCCATCTTGTCTCTGCCATACAAAAAGCAAAGCATAAGACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCCATCTTGTCTCTGCCATACAAAAAGCAAAGCATAAGACTG  50

seq1  ATCTGCATTTAGCAAAAGCTTTCACAAGGCACAGGAGTCTAGAGGTGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCATTTAGCAAAAGCTTTCACAAGGCACAGGAGTCTAGAGGTGTGG  100

seq1  TTCAAGTGCTGGCTTGCACCTGATAGCTACCCTGGCAAAGCCATTAAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTGCTGGCTTGCACCTGATAGCTACCCTGGCAAAGCCATTAAGAT  150

seq1  ATCCTGTGCCCTCAGCAGTTTGATGTGAGAGTCCATGGCAATTCAAGTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTGCCCTCAGCAGTTTGATGTGAGAGTCCATGGCAATTCAAGTGC  200

seq1  AGCTAAAAGGATCCAGGGGGAGAACCAATGAACTAAAAAATACACTGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAAAGGATCCAGGGGGAGAACCAATGAACTAAAAAATACACTGAAG  250

seq1  GGGAAATAATGTGAGACACTGAGGGATTAAGATTAAAATTGATTGGTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATAATGTGAGACACTGAGGGATTAAGATTAAAATTGATTGGTTGT  300

seq1  ATTTTAACCACTTACACAAACAAATTCTAGAGCTAGAAAGAAATGAATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAACCACTTACACAAACAAATTCTAGAGCTAGAAAGAAATGAATGA  350

seq1  CTTCTTGCTCTGATAGCTGTGAATCAGGAGGGAATAAACAATATGAGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGCTCTGATAGCTGTGAATCAGGAGGGAATAAACAATATGAGTTG  400

seq1  TGGGCTGTACAGCTGCCTCCTGGCAACTTCTTAGTAGAGGGAAAATTACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTGTACAGCTGCCTCCTGGCAACTTCTTAGTAGAGGGAAAATTACT  450

seq1  AAAGTGGAAAAAATGTTATTTCACCTGGAGAAGAGAAGTAGAAACCCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGAAAAAATGTTATTTCACCTGGAGAAGAGAAGTAGAAACCCCTC  500

seq1  TGAATTCATCATTTGTATGTTACTACTCTCTATAAACCAACTATACTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTCATCATTTGTATGTTACTACTCTCTATAAACCAACTATACTCAT  550

seq1  TGTTTAAAAAGAGACTGCCCTGTGAAAAAACTCAGTTATTATACTTACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAAAAGAGACTGCCCTGTGAAAAAACTCAGTTATTATACTTACTC  600

seq1  CACTTCCTTGTCACAAGGGATTAAAATGTGGTTTAAAGATATCAAATGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCTTGTCACAAGGGATTAAAATGTGGTTTAAAGATATCAAATGGA  650

seq1  AAATTCTACAAAGTAGTTGTGATGGTTTGACACTGTTGACAAGTGTAACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTACAAAGTAGTTGTGATGGTTTGACACTGTTGACAAGTGTAACC  700

seq1  TTGTTGGAGTAGGTATGGCCTTGTGGGTGTGGGCTTTAATACCCTTGTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGAGTAGGTATGGCCTTGTGGGTGTGGGCTTTAATACCCTTGTCC  750

seq1  TAACTGTCTGGGAGCCACTATTCTGCTAGCAGCCTTCAGATGAAGATGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGTCTGGGAGCCACTATTCTGCTAGCAGCCTTCAGATGAAGATGTA  800

seq1  GAAGTCTCAGCTCTGCCTCCACTATGCCTGCCTGAATGTCGCCATGTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCTCAGCTCTGCCTCCACTATGCCTGCCTGAATGTCGCCATGTTTC  850

seq1  TGTCTTGATGGTAATGGATTGAACCTCTGACCCTGGAAGCCAGCCCCAAT  900
      |||||||||||||||||| || ||||||||||||||||||||| ||||||
seq2  TGTCTTGATGGTAATGGAATGGACCTCTGACCCTGGAAGCCAG-CCCAAT  899

seq1  TAAATGTTGTCCTTTATAGGACTTGTCTT-GGTCATGGTGGTGTCTGTTC  949
      |||||||||||| |||||||||||||||| ||||||||||||||||||||
seq2  TAAATGTTGTCC-TTATAGGACTTGTCTTGGGTCATGGTGGTGTCTGTTC  948

seq1  ACAGCAGTAAAACCCTAACATGATATATCTCAGTGATGTGATGAACTCCC  999
       |||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCAGCAGTAAAACCCTAACATGATATATCTCAGTGATGTGATGAACT-CC  997

seq1  AAGCCATTCCAT-CCTACTCCA-AGATTTATATGAAT  1034
      |||||||||||| ||||||||| |  |||||||||||
seq2  AAGCCATTCCATCCCTACTCCAGAATTTTATATGAAT  1034