BAC Information

Click to search

BAC

Clone NameB6Ng01-184C03
Chromosome8 (Build37)
Map Location 61,170,587 - 61,171,672
singlet/doubletsinglet
Overlap gene4930431L04Rik
Upstream geneLOC100040711
Downstream geneBC030500, LOC665116, LOC436042
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184C03.bB6Ng01-184C03.g
ACCGA009583GA009584
length1,0921,008
definitionB6Ng01-184C03.b B6Ng01-184C03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ctcatatcctagaagcagtgttcttagtaaaaccggcaactcctaaaagc
ttcactaatataagacctttgttcctctttctctagttacagaatgccag
tgtttataaatatcaaaaagtattttagattgtggcaagtttggaagatt
attcaatggacataagtgtttgaaataccagcatagcaatgtggaagtga
ggctggatgggaaagattaatggagtagaatattcagacccaagtataat
agtctcttattctaatactctatcactgtatcacattaaccctctatcaa
ccacatatatcactctatcaaaaaaatgatgttacaatccaagtatcaaa
actaaaaatgaagccattatcaacctctcagaattatttcaaggaagtat
gtatttataagtatgtaattataaacacatgtatacatattatacacatg
catacacacatatatgtatatatatatattaatttatcaatatattctat
tatattagtcaataggcctacagtttttatggcaaattatgtttctaatt
ctgcagcacttcagtaacatttgtagacacagcatattgactgagttgca
tgttaatgtggaggtagccatagaaggctataatcataaaggctatatag
actcagtgattccttcaggtgctgtagatattagcaaaactcttgtgtgc
acagtccaacaatgcttggactaaatgcagtgtgtagactgttgtataga
atgtgaaatgaaagatttttacaaactataagagaactttaacataattc
aatttggaataataaagcatctaaatatactgtctcctttaaatttgggg
gagtatgtcacaataccagaaggcattcatacaggaccctgccaagcact
ctctgcatgcagagcagaattttccaatttacattcttcgaaaaaggaca
gctcaaccaaatttaatgtatttttggctgacgatttgtatgcctagtct
ctgcccaacattacctttactctgaaagagcccagctataaagcttagaa
tttatagtttataataggaagtttggatgaagcgtgtttgca
gaattctcacctgaggaataccgaaaggctgagaagcacctgagaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacacttctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaattcggacatagtactaccggaggatctcgcaatccctctcctgggc
atatatccagaagatgtcccaaccagtaagaagggcacatgctccactat
gttcatagcagccttatttataatagccagaagccagaaagaacccagat
gtccctcaacagaggaatggatacaaaaaatgtggtacacttacacaatg
gagtactactcagctattaaagggaatgaatttatgaaattcctaggcaa
atggttggacctggagggcatcatcctgagtgaggtaaaccaatcacaaa
agaactcaaatgaaatgtactcactgattagtggatattagcccagaaac
ttagtatagcaagatataaggtacaatatgcaaaacacatgaaactgaag
aagaacgaagaccaaagtgtggacactttgctccttcttagaattggaaa
caatcacccatggaaggagttacagagacaaagtttggagctgagacaaa
aggatggaccatctagagactgccatatccagggatccatcccataatta
gcctccaaacgataacaccattgcatacactagcaagcctttgttgcaag
gaccgtgatatagccatctcttgtgagactaggccggggcctagcaaaca
cagaagtggatgctcacagtcaactaatgggatggtatcacagggttccc
cattgggagggactagagaaagtactcaagtgagctaatggaatctgcaa
ctctattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_61170587_61171672
seq2: B6Ng01-184C03.b_46_1137 (reverse)

seq1  TGCAAACA-GCTCTAT-CAAACTTCCTATTATAAACTAT-AATTCTAGGC  47
      |||||||| |||  || |||||||||||||||||||||| ||||||| ||
seq2  TGCAAACACGCTTCATCCAAACTTCCTATTATAAACTATAAATTCTAAGC  50

seq1  TTTATAGCTTGGCTCTTTCAGAGTAAAG--TATGTTGGGCAGAGACTAGG  95
      ||||||||| ||||||||||||||||||   |||||||||||||||||||
seq2  TTTATAGCTGGGCTCTTTCAGAGTAAAGGTAATGTTGGGCAGAGACTAGG  100

seq1  CATACAAATCGTCAGCC-AAAATACATTAAATTTGGTTGAGCTGTCCTTT  144
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CATACAAATCGTCAGCCAAAAATACATTAAATTTGGTTGAGCTGTCCTTT  150

seq1  TTCGAAGAATGTAAATTGGAAAATTCTGCTCTGCATGCAGAGAGTGCTTG  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAAGAATGTAAATTGGAAAATTCTGCTCTGCATGCAGAGAGTGCTTG  200

seq1  GCAGGGTCCTGTATGAATGCCTTCTGGTATTGTGACATACTCCCCCAAAT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGTCCTGTATGAATGCCTTCTGGTATTGTGACATACTCCCCCAAAT  250

seq1  TTAAAGGAGACAGTATATTTAGATGCTTTATTATTCCAAATTGAATTATG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGAGACAGTATATTTAGATGCTTTATTATTCCAAATTGAATTATG  300

seq1  TTAAAGTTCTCTTATAGTTTGTAAAAATCTTTCATTTCACATTCTATACA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTTCTCTTATAGTTTGTAAAAATCTTTCATTTCACATTCTATACA  350

seq1  ACAGTCTACACACTGCATTTAGTCCAAGCATTGTTGGACTGTGCACACAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCTACACACTGCATTTAGTCCAAGCATTGTTGGACTGTGCACACAA  400

seq1  GAGTTTTGCTAATATCTACAGCACCTGAAGGAATCACTGAGTCTATATAG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTGCTAATATCTACAGCACCTGAAGGAATCACTGAGTCTATATAG  450

seq1  CCTTTATGATTATAGCCTTCTATGGCTACCTCCACATTAACATGCAACTC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATGATTATAGCCTTCTATGGCTACCTCCACATTAACATGCAACTC  500

seq1  AGTCAATATGCTGTGTCTACAAATGTTACTGAAGTGCTGCAGAATTAGAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATATGCTGTGTCTACAAATGTTACTGAAGTGCTGCAGAATTAGAA  550

seq1  ACATAATTTGCCATAAAAACTGTAGGCCTATTGACTAATATAATAGAATA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATTTGCCATAAAAACTGTAGGCCTATTGACTAATATAATAGAATA  600

seq1  TATTGATAAATTAATATATATATATACATATATGTGTGTATGCATGTGTA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATAAATTAATATATATATATACATATATGTGTGTATGCATGTGTA  650

seq1  TAATATGTATACATGTGTTTATAATTACATACTTATAAATACATACTTCC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATGTATACATGTGTTTATAATTACATACTTATAAATACATACTTCC  700

seq1  TTGAAATAATTCTGAGAGGTTGATAATGGCTTCATTTTTAGTTTTGATAC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATAATTCTGAGAGGTTGATAATGGCTTCATTTTTAGTTTTGATAC  750

seq1  TTGGATTGTAACATCATTTTTTTGATAGAGTGATATATGTGGTTGATAGA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATTGTAACATCATTTTTTTGATAGAGTGATATATGTGGTTGATAGA  800

seq1  GGGTTAATGTGATACAGTGATAGAGTATTAGAATAAGAGACTATTATACT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAATGTGATACAGTGATAGAGTATTAGAATAAGAGACTATTATACT  850

seq1  TGGGTCTGAATATTCTACTCCATTAATCTTTCCCATCCAGCCTCACTTCC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCTGAATATTCTACTCCATTAATCTTTCCCATCCAGCCTCACTTCC  900

seq1  ACATTGCTATGCTGGTATTTCAAACACTTATGTCCATTGAATAATCTTCC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGCTATGCTGGTATTTCAAACACTTATGTCCATTGAATAATCTTCC  950

seq1  AAACTTGCCACAATCTAAAATACTTTTTGATATTTATAAACACTGGCATT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGCCACAATCTAAAATACTTTTTGATATTTATAAACACTGGCATT  1000

seq1  CTGTAACTAGAGAAAGAGGAACAAAGGTCTTATATTAGTGAAGCTTTTAG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAACTAGAGAAAGAGGAACAAAGGTCTTATATTAGTGAAGCTTTTAG  1050

seq1  GAGTTGCCGGTTTTACTAAGAACACTGCTTCTAGGATATGAG  1086
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGCCGGTTTTACTAAGAACACTGCTTCTAGGATATGAG  1092