BAC Information

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BAC

Clone NameB6Ng01-184C12
Chromosome8 (Build37)
Map Location 65,297,951 - 65,381,514
singlet/doubletdoublet
Overlap genenone
Upstream genePalld, BC013672, Anxa10, LOC100040775, LOC384830, LOC100040804, LOC665267
Downstream geneSpock3, LOC384831
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184C12.bB6Ng01-184C12.g
ACCGA009601GA009602
length1,1161,065
definitionB6Ng01-184C12.b B6Ng01-184C12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,380,401 - 65,381,514)(65,297,951 - 65,299,003)
sequence
gaattctgactatgtttttgtggtatttttttttaacattatacaaaatt
gtcagagacttttgcaaagtgatggcatgttttgccctcccacgagttga
ggaatttggagtgcaccagccactcccctctcctcatcttttcctgtcat
tagtccttttagtttttgacatccagtgggtgtttaatggtatcacgctc
tggctgtcagaatgacaatttaaaaactagatgacttcatgccattccct
cttttggcacctcaagtgacttgttcgtctgctgctcctttaccacagaa
agatattatccttatacggggtcttctcaagccttctaatacacattaca
catgtgtccatgatcaggcctcgtgtttgtttggtttctcagtcagttgt
tgcttttttcttcaatgtatggatcaaggtttcctgaattaaaattgctc
tctcatctctctgtgctgtgaggaacatcctttctttttatctgtctagg
acaataattacttgatttttttgttgctgctgttgtttgtttatttgttt
tgttttgttatgttttgttttgaaacatgatctcattgtctagctttggc
tgatctgaagattgctgtgtataacagagtgatccagaactcacagagat
cctccacccctgccctttaagtactagaggttgacatgtgcgccaccatt
cctgcataggaaaataatttttatttgactggttcaaacaacctctcaat
gtaaccttcctttatttatctgtggaatactagctcccaattttctatgt
tacaaaacatgtcataatgcatattctctttttctatttttaaaatttac
aattttataagtattttatataaattactttactgaagcttgtgatatcc
ctaagagcagtatatatgggtggatgattaatcactgcacaccgtgcaca
acacctgcaaacatcaataaaaatgttttagaaaatagaaagacgaatgg
tggtttctgtcgtaattactctccatttattgggaaatgtttcttttgtg
ttttggcaggaaggagggaagaattatttctcattatacatgtgattctt
gagcattgtctagagc

gaattctcacctgaggaatacagaatgaacaagaagcacctgaaaaaatg
ttcagcatcattaatcatcagggaaatgcaaatcaaacaaccctgagatc
ctacctcacaccagtcagaatggctaagatcaaaaactcaggtgacagca
gatgctggcaaggatgtggataaagaggaacactcctccactgttggtgg
gattgcaagcttgtaaaacaactctgaaaataagtcttggagttcctcaa
aatattggacatagtactaatggaggatcctgcaatacctctcctgggca
tatatccagaagatgttccaactggtaagaaggacacgtgctccttaatc
tgtccttatatctgaaggatagctttctttttttttggtaaaatattcct
ggttttcaaagtttatcatttcgtaatctggctaaaagatctctttgtag
agatccactctaaccagtggttgttctcttatgtctgatgggacagtcac
aagatccttggagttggtataaataagtgtcctggaaaattattgtattc
cctaggtagtggttgtttccttggttgttttgttttttgttttgctttgt
gttttatttgttgttgttggtagtggtgttttcaggttttgttttatttc
tttttctttctttccatttaaattttttcagctcttccacttcaaacttc
tcttcctttgaagaagtgtatatttcttccagactaaatggaggagtgga
ttccatttgaggaaataataataataataataataataataataataata
ataatgggaaaaagaaaaaggtagttaagcagtgtccacatctcaaaaac
aactcagatctttattgtagacctaatccacctctatccccacgtatttc
tgcttggtgtattctactttaacatcatgtgtctttacttttctttacaa
ggccaagctaacacatgaggagtattcataattgttttcatatagactgg
atcttgcaactcttaagagcccatgactttcaaacaggatgtacccaatt
tcctttcctttcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_65380401_65381514
seq2: B6Ng01-184C12.b_44_1159 (reverse)

seq1  GCTCTAGAACAAATGCTCAGAAATCACATGTTATAATGAGAAATAATTCT  50
      ||||||||   ||||||||  ||||||||| |||||||||||||||||||
seq2  GCTCTAGA--CAATGCTCAAGAATCACATG-TATAATGAGAAATAATTCT  47

seq1  TCCCTCCTTCCTTGCAAAACAC-AAAGAAACATTT-CCAAT-AATGGAGA  97
      ||||||||||||  |||||||| |||||||||||| ||||| ||||||||
seq2  TCCCTCCTTCCTGCCAAAACACAAAAGAAACATTTCCCAATAAATGGAGA  97

seq1  GTAATTACGACAGAAACCA-CATTCGTCTTTCTATTTTCTAAAACATTTT  146
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GTAATTACGACAGAAACCACCATTCGTCTTTCTATTTTCTAAAACATTTT  147

seq1  TATTGATGTTTGCA-GTGTTGTGCACGGTGTGCAGTGATTAATCATCCAC  195
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TATTGATGTTTGCAGGTGTTGTGCACGGTGTGCAGTGATTAATCATCCAC  197

seq1  CCATATATACTGCTCTTAGGGATATCACAAGCTTCAGTAAAGTAATTTAT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATATACTGCTCTTAGGGATATCACAAGCTTCAGTAAAGTAATTTAT  247

seq1  ATAAAATACTTATAAAATTGTAAATTTTAAAAATAGAAAAAGAGAATATG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATACTTATAAAATTGTAAATTTTAAAAATAGAAAAAGAGAATATG  297

seq1  CATTATGACATGTTTTGTAACATAGAAAATTGGGAGCTAGTATTCCACAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATGACATGTTTTGTAACATAGAAAATTGGGAGCTAGTATTCCACAG  347

seq1  ATAAATAAAGGAAGGTTACATTGAGAGGTTGTTTGAACCAGTCAAATAAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAAGGAAGGTTACATTGAGAGGTTGTTTGAACCAGTCAAATAAA  397

seq1  AATTATTTTCCTATGCAGGAATGGTGGCGCACATGTCAACCTCTAGTACT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTTCCTATGCAGGAATGGTGGCGCACATGTCAACCTCTAGTACT  447

seq1  TAAAGGGCAGGGGTGGAGGATCTCTGTGAGTTCTGGATCACTCTGTTATA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGGCAGGGGTGGAGGATCTCTGTGAGTTCTGGATCACTCTGTTATA  497

seq1  CACAGCAATCTTCAGATCAGCCAAAGCTAGACAATGAGATCATGTTTCAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAATCTTCAGATCAGCCAAAGCTAGACAATGAGATCATGTTTCAA  547

seq1  AACAAAACATAACAAAACAAAACAAATAAACAAACAACAGCAGCAACAAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACATAACAAAACAAAACAAATAAACAAACAACAGCAGCAACAAA  597

seq1  AAAATCAAGTAATTATTGTCCTAGACAGATAAAAAGAAAGGATGTTCCTC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAAGTAATTATTGTCCTAGACAGATAAAAAGAAAGGATGTTCCTC  647

seq1  ACAGCACAGAGAGATGAGAGAGCAATTTTAATTCAGGAAACCTTGATCCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCACAGAGAGATGAGAGAGCAATTTTAATTCAGGAAACCTTGATCCA  697

seq1  TACATTGAAGAAAAAAGCAACAACTGACTGAGAAACCAAACAAACACGAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTGAAGAAAAAAGCAACAACTGACTGAGAAACCAAACAAACACGAG  747

seq1  GCCTGATCATGGACACATGTGTAATGTGTATTAGAAGGCTTGAGAAGACC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGATCATGGACACATGTGTAATGTGTATTAGAAGGCTTGAGAAGACC  797

seq1  CCGTATAAGGATAATATCTTTCTGTGGTAAAGGAGCAGCAGACGAACAAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTATAAGGATAATATCTTTCTGTGGTAAAGGAGCAGCAGACGAACAAG  847

seq1  TCACTTGAGGTGCCAAAAGAGGGAATGGCATGAAGTCATCTAGTTTTTAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGAGGTGCCAAAAGAGGGAATGGCATGAAGTCATCTAGTTTTTAA  897

seq1  ATTGTCATTCTGACAGCCAGAGCGTGATACCATTAAACACCCACTGGATG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCATTCTGACAGCCAGAGCGTGATACCATTAAACACCCACTGGATG  947

seq1  TCAAAAACTAAAAGGACTAATGACAGGAAAAGATGAGGAGAGGGGAGTGG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAACTAAAAGGACTAATGACAGGAAAAGATGAGGAGAGGGGAGTGG  997

seq1  CTGGTGCACTCCAAATTCCTCAACTCGTGGGAGGGCAAAACATGCCATCA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGCACTCCAAATTCCTCAACTCGTGGGAGGGCAAAACATGCCATCA  1047

seq1  CTTTGCAAAAGTCTCTGACAATTTTGTATAATGTTAAAAAAAAATACCAC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCAAAAGTCTCTGACAATTTTGTATAATGTTAAAAAAAAATACCAC  1097

seq1  AAAAACATAGTCAGAATTC  1114
      |||||||||||||||||||
seq2  AAAAACATAGTCAGAATTC  1116


seq1: chr8_65297951_65299003
seq2: B6Ng01-184C12.g_64_1128

seq1  GAATTCTCACCTGAGGAATACAGAATGAACAAGAAGCACCTGAAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTGAGGAATACAGAATGAACAAGAAGCACCTGAAAAAATG  50

seq1  TTCAGCATCATTAATCATCAGGGAAATGCAAATCAAACAACCCTGAGATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCATCATTAATCATCAGGGAAATGCAAATCAAACAACCCTGAGATC  100

seq1  CTACCTCACACCAGTCAGAATGGCTAAGATCAAAAACTCAGGTGACAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTCACACCAGTCAGAATGGCTAAGATCAAAAACTCAGGTGACAGCA  150

seq1  GATGCTGGCAAGGATGTGGATAAAGAGGAACACTCCTCCACTGTTGGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGGCAAGGATGTGGATAAAGAGGAACACTCCTCCACTGTTGGTGG  200

seq1  GATTGCAAGCTTGTAAAACAACTCTGAAAATAAGTCTTGGAGTTCCTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCAAGCTTGTAAAACAACTCTGAAAATAAGTCTTGGAGTTCCTCAA  250

seq1  AATATTGGACATAGTACTAATGGAGGATCCTGCAATACCTCTCCTGGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGGACATAGTACTAATGGAGGATCCTGCAATACCTCTCCTGGGCA  300

seq1  TATATCCAGAAGATGTTCCAACTGGTAAGAAGGACACGTGCTCCTTAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCCAGAAGATGTTCCAACTGGTAAGAAGGACACGTGCTCCTTAATC  350

seq1  TGTCCTTATATCTGAAGGATAGCTTTCTTTTTTTTTGGTAAAATATTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTATATCTGAAGGATAGCTTTCTTTTTTTTTGGTAAAATATTCCT  400

seq1  GGTTTTCAAAGTTTATCATTTCGTAATCTGGCTAAAAGATCTCTTTGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTCAAAGTTTATCATTTCGTAATCTGGCTAAAAGATCTCTTTGTAG  450

seq1  AGATCCACTCTAACCAGTGGTTGTTCTCTTATGTCTGATGGGACAGTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCACTCTAACCAGTGGTTGTTCTCTTATGTCTGATGGGACAGTCAC  500

seq1  AAGATCCTTGGAGTTGGTATAAATAAGTGTCCTGGAAAATTATTGTATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCCTTGGAGTTGGTATAAATAAGTGTCCTGGAAAATTATTGTATTC  550

seq1  CCTAGGTAGTGGTTGTTTCCTTGGTTGTTTTGTTTTTTGTTTTGCTTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGTAGTGGTTGTTTCCTTGGTTGTTTTGTTTTTTGTTTTGCTTTGT  600

seq1  GTTTTATTTGTTGTTGTTGGTAGTGGTGTTTTCAGGTTTTGTTTTATTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATTTGTTGTTGTTGGTAGTGGTGTTTTCAGGTTTTGTTTTATTTC  650

seq1  TTTTTCTTTCTTTCCATTTAAATTTTTTCAGCTCTTCCACTTCAAACTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTTCTTTCCATTTAAATTTTTTCAGCTCTTCCACTTCAAACTTC  700

seq1  TCTTCCTTTGAAGAAGTGTATATTTCTTCCAGACTAAATGGAGGAGTGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTTGAAGAAGTGTATATTTCTTCCAGACTAAATGGAGGAGTGGA  750

seq1  TTCCA-TTGAGGAAATAATAATAATAATAATAATAATAATAATAATAATA  799
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTGAGGAAATAATAATAATAATAATAATAATAATAATAATAATA  800

seq1  ATAAT-GGAAAAAGAAAAAGGTAGTT-AGCAGTGTCAACATCTCAAAAAC  847
      ||||| |||||||||||||||||||| ||||||||| |||||||||||||
seq2  ATAATGGGAAAAAGAAAAAGGTAGTTAAGCAGTGTCCACATCTCAAAAAC  850

seq1  -ACTCAGATCTTTATTGTAGA-CTAATCCA-CTCTAT-CCCACGTATTTC  893
       |||||||||||||||||||| |||||||| |||||| ||||||||||||
seq2  AACTCAGATCTTTATTGTAGACCTAATCCACCTCTATCCCCACGTATTTC  900

seq1  TGCTTGGTGTA-TCTAC-TTAACATCATGTGTCTTTACTTTCCTTTACAA  941
      ||||||||||| ||||| ||||||||||||||||||||||| ||||||||
seq2  TGCTTGGTGTATTCTACTTTAACATCATGTGTCTTTACTTTTCTTTACAA  950

seq1  AGCCAAGCT-ACACATGAGGAGTA-TCATAATTGTTTTC--ATAGACTGT  987
       |||||||| |||||||||||||| ||||||||||||||  |||||||| 
seq2  GGCCAAGCTAACACATGAGGAGTATTCATAATTGTTTTCATATAGACTGG  1000

seq1  ATCTTGCAACTCTTAAGAGCCCATGACTTTTCACAACAAGATGTACCC-A  1036
      ||||||||||||||||||||||||||| ||||| |||| ||||||||| |
seq2  ATCTTGCAACTCTTAAGAGCCCATGAC-TTTCA-AACAGGATGTACCCAA  1048

seq1  TTTCCTTTCCTTTCCTT  1053
      |||||||||||||||||
seq2  TTTCCTTTCCTTTCCTT  1065


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