BAC Information

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BAC

Clone NameB6Ng01-184F07
Chromosome8 (Build37)
Map Location 53,871,388 - 53,872,575
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC623872, LOC100040220, LOC623935, 1190028D05Rik, LOC676688
Downstream geneAga, Neil3, LOC100040107
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184F07.bB6Ng01-184F07.g
ACCGA009735GA009736
length1,1921,009
definitionB6Ng01-184F07.b B6Ng01-184F07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacagaactggtccttcattatacccgggattctttggcaaactt
aactctaatgaaataatcagaataggggacaattcctatagtgttgcatt
tgacatacacccatccaaaggttcatataaaagaatgtgattattatcga
caacaaaattctgacaacctttatttaagttatatgacatttttgaaaat
aactgtaattttacaaaaataattcctcaaagaaaatattcaattttcta
aaactagaaactgattaacagtatcattgaagatttcctattagtttagt
atacttgttgtaattaatgaaccaatgttgatatataatttttaaagtat
aaaatttattcacagtattttagtttttgcctaatgcatgttttttattt
gtttgatctgaaattagattgcacacaatcaccttaattaatatgtatgt
ttactgtcatttattatcaaacacattaatgatctcatatttccaggaac
aactttaactctaaccagaactgaataccattgatcatcacctctccatt
attgtataccaaatatctctgataacttactacagaatggactacaataa
cactaataatattctcctaactatactattgaaattaattttacccacat
ctcttaagatgaaagttttaaatatggaaacatataactataaaattttt
aatttactattgtatgtatcaaatatgcaaaaaatgtaactgtcctgtat
caagaacagtcatttcaggtaattaactcatttttgactacagagtgttt
ccactcatgaatccttacattttcacatgctttcaacatacagctacaaa
tagtatataaatacaggcttcaaacatatatttacaccagagttttatct
cttgatcagtaatttagtaagctatattccatcctcagctctgtgtatgg
gatattggacaactcaagctaggcaggaactcaaggcatgaacttggaaa
tcaagaactaaagctgaggtcacacaggattgtgagttattattttgcct
ccccatgcttcacttcagttaatgtttttaatataaccacaatacacttg
ctcgaggtgtatgataacatttccaaacataaacttaacactcaacaata
cacctcatttaaagcatggtttcattagtataccacaaatgt

gaattctgggggaatcaccatccctaacctcaaactgtactacagggcaa
tcatgataaaaacttcatggtatttgtacagaagcaggcaagtagatcaa
tggaatagaattgaagatccagaaatgcaaccacacacttcaaaggagct
gaaaccaagcagtggaaaagagcattttcaacaaatggttttgattcaac
tggcagtcagcatgtagaagaatgcaaaatgatccattcttatctccttg
tacaaatgtcaagtcccagtggatcaaggacctccacataaaaccaaata
cactgaaactaatagaagagaaagtggggaagagacttgaaaacatgggc
acagaggaaaagttcctgaacagaacaccaatggcttatactctaagata
aagaactgataaatgggaccttataaaattgcaaaggttctataaggtga
aggactctgtcaatgggagaaaacagcaaccaagagattgggaaaagatc
tttaccaactttatatctgatacagggctagtaaccaatatatataaaga
aatcaagaagttaaacaccagcgaaccaaataaccctattaataaatggg
gtacagggctaaacaaagaattcttaacttaggaaactggaatgttcaag
aagcacgtaaagaaatgtttaacatccttagtcatcagggaaatgcagat
caaaatgaccctgagattccacctcacaccagtcagaatggctaagatca
aaagcttaggtgacaacagatggtggcatggatgtggagaaagagggaac
actcctccatttttgccagattacaagctggtataaccattgtggaaatc
agtttgttgctttcttcagaaaattagacattagtatttaacttgaggac
caggatataccacccctggggcatatccagaaaggtgttccacatatgac
aagggacacatggctccactatgataatacccgaacttattttatgaata
ggcgaagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_53871388_53872575
seq2: B6Ng01-184F07.b_44_1235

seq1  GAATTCACAGAACTGGTCCTTCATTATACCCGGGATTCTTTGGCAAACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGAACTGGTCCTTCATTATACCCGGGATTCTTTGGCAAACTT  50

seq1  AACTCTAATGAAATAATCAGAATAGGGGACAATTCCTATAGTGTTGCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTAATGAAATAATCAGAATAGGGGACAATTCCTATAGTGTTGCATT  100

seq1  TGACATACACCCATCCAAAGGTTCATATAAAAGAATGTGATTATTATCGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATACACCCATCCAAAGGTTCATATAAAAGAATGTGATTATTATCGA  150

seq1  CAACAAAATTCTGACAACCTTTATTTAAGTTATATGACATTTTTGAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAATTCTGACAACCTTTATTTAAGTTATATGACATTTTTGAAAAT  200

seq1  AACTGTAATTTTACAAAAATAATTCCTCAAAGAAAATATTCAATTTTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTAATTTTACAAAAATAATTCCTCAAAGAAAATATTCAATTTTCTA  250

seq1  AAACTAGAAACTGATTAACAGTATCATTGAAGATTTCCTATTAGTTTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAGAAACTGATTAACAGTATCATTGAAGATTTCCTATTAGTTTAGT  300

seq1  ATACTTGTTGTAATTAATGAACCAATGTTGATATATAATTTTTAAAGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTGTTGTAATTAATGAACCAATGTTGATATATAATTTTTAAAGTAT  350

seq1  AAAATTTATTCACAGTATTTTAGTTTTTGCCTAATGCATGTTTTTTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTATTCACAGTATTTTAGTTTTTGCCTAATGCATGTTTTTTATTT  400

seq1  GTTTGATCTGAAATTAGATTGCACACAATCACCTTAATTAATATGTATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATCTGAAATTAGATTGCACACAATCACCTTAATTAATATGTATGT  450

seq1  TTACTGTCATTTATTATCAAACACATTAATGATCTCATATTTCCAGGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTCATTTATTATCAAACACATTAATGATCTCATATTTCCAGGAAC  500

seq1  AACTTTAACTCTAACCAGAACTGAATACCATTGATCATCACCTCTCCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTAACTCTAACCAGAACTGAATACCATTGATCATCACCTCTCCATT  550

seq1  ATTGTATACCAAATATCTCTGATAACTTACTACAGAATGGACTACAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATACCAAATATCTCTGATAACTTACTACAGAATGGACTACAATAA  600

seq1  CACTAATAATATTCTCCTAACTATACTATTGAAATTAATTTTACCCACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAATAATATTCTCCTAACTATACTATTGAAATTAATTTTACCCACAT  650

seq1  CTCTTAAGATGAAAGTTTTAAATATGGAAACATATAACTATAAAATTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAAGATGAAAGTTTTAAATATGGAAACATATAACTATAAAATTTTT  700

seq1  AATTTACTATTGTATGTATCAAATATGCAAAAAATGTAACTGTCCTGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACTATTGTATGTATCAAATATGCAAAAAATGTAACTGTCCTGTAT  750

seq1  CAAGAACAGTCATTTCAGGTAATTAACTCATTTTTGACTACAGAGTGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAACAGTCATTTCAGGTAATTAACTCATTTTTGACTACAGAGTGTTT  800

seq1  CCACTCATGAATCCTTACATTTTCACATGCTTTCAACATACAGCTACAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCATGAATCCTTACATTTTCACATGCTTTCAACATACAGCTACAAA  850

seq1  TAGTATATAAATACAGGCTTCAAACATATATTTACACCAGAGTTTTATCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATATAAATACAGGCTTCAAACATATATTTACACCAGAGTTTTATCT  900

seq1  CTTGATCAGTAATTTAGTAAGCTATATTCCATCCTCAGCTCTGTGTAT-G  949
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTTGATCAGTAATTTAGTAAGCTATATTCCATCCTCAGCTCTGTGTATGG  950

seq1  GATATTGGACAACTCAAGCTAGGCAGGAACTCAAGGCATGAACTTGG-AA  998
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GATATTGGACAACTCAAGCTAGGCAGGAACTCAAGGCATGAACTTGGAAA  1000

seq1  TCAAGAACTAAAGCTGAGGTCACACAGGATTGTGAGTTATTATTTTG-CT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCAAGAACTAAAGCTGAGGTCACACAGGATTGTGAGTTATTATTTTGCCT  1050

seq1  CCCCATGCTTCAC-TCAGTTAATGTTTT--ATATAACCACATACCACTTG  1094
      ||||||||||||| ||||||||||||||  |||||||||||   ||||||
seq2  CCCCATGCTTCACTTCAGTTAATGTTTTTAATATAACCACAATACACTTG  1100

seq1  CCTCGAGGTGTATGAATACATTTCCAAACATAAACTTTAACACTCAAC-A  1143
       ||||||||||||||  |||||||||||||||||| |||||||||||| |
seq2  -CTCGAGGTGTATGATAACATTTCCAAACATAAAC-TTAACACTCAACAA  1148

seq1  TACACCTCAATTTTAAGCATGTTTTCATCACTATACCACAAATGT  1188
      |||||||| |||| ||||||| |||||| | ||||||||||||||
seq2  TACACCTC-ATTTAAAGCATGGTTTCATTAGTATACCACAAATGT  1192


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