BAC Information

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BAC

Clone NameB6Ng01-184L24
Chromosome8 (Build37)
Map Location 15,399,644 - 15,476,572
singlet/doubletdoublet
Overlap geneEG234097
Upstream geneDlgap2, C030037F17Rik, Cln8, Arhgef10, 2900016B01Rik, 5830468F06Rik, Kbtbd11, BB014433, Myom2, EG665599
Downstream geneEG665619, LOC634008, Csmd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184L24.bB6Ng01-184L24.g
ACCGA010045GA010046
length9641,135
definitionB6Ng01-184L24.b B6Ng01-184L24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,399,644 - 15,400,301)(15,475,444 - 15,476,572)
sequence
gaattctagattttaatccataggtaacagaaggagactgcacaccacac
tggatacagcgtgagcatagaaaacctcaaaccgtgctttcacaggacac
actctgtccaacaaggccacacctctttttttttttttcttgctgatact
ttattatttttgtttttaattgggtatttatttcatttacatttccaatg
ctatcccaaaagtcccacacacgctgccccacccactcccccacccaccc
agtcccacttcttggccctggcattcccctgtactgaggcagataaagtt
tgcatgatcaatgggcctctctttccactgatggatgactaggccatctt
ctgattcatatgcagctagagacacgagctccagggggtattggttagtt
catattgttgttctacctataggattgcagatcccttcagctaattgggt
aatttctctagctcctccattgggggccctgtgatccatccaatagctga
ctgtgagcatccacttctgtgtttgccaggccccggcatagtctcacaag
agacagccatatctgggtccttgcagcaaaatcttgctagtgtatgcaat
ggtgtcagcgtttggaacctgattatgggatggatccccggatatggcag
tctctagattgtctatccttttgtctcagctccaaactttgtctctgtaa
ctccttccacaggtgttttgttcccaattctaagaaggggcaaagtgtct
gcactttggtctttgtccttcttgagtttcatgcgtttagcaaattgtgt
cttatatcttggatattctaagtttctgggctaatatccacttatcaaga
gagtacatattatgcgagttcttttgtgatagggttacctcactcaggat
gatgcccctccagggtccatccatttgcctaggaatttcataaattccat
tcctttttatagct
gaattccgaatgtgaggagcctcaaatcactaggaaattgttacagagta
aaattcagatgataggatggtctctttctacatacaatgcgcacttcttg
catatggaactaaagtgtgattaataataaccacaacttgatgcataagg
gctgggccattcagtattgtaagcatcacttcagattgggctaatagtga
aacagaagcatggaggccaacttgcccacagaagatagtaatacattgac
ttctgctaactcttgggcacagaaggacaagcaaaccccttcctgactat
ggacgccattgttttcatcatctgaaaacaggagtcgatgacgcgcactc
agaaaatggatggatattgcagctcagtgagagttgtcctcattaaaact
gagtttatcttctctctagaatgttccatggtgctctgacttcttgttgg
tctgcatgtgtggaacccgtgcatatatgcagagggtagaggctgcctgg
taccttccctgaactcttcctaccttatatctgagtctctcacaaaccct
gctgtttaaacaatatcaattaaacagtgagctctaaggatctgctggcc
tctgcctcctgtccctgtaacaatagggttatggatgtgtgctctcacac
cagattttactgggtgctcaggatccaactcgagctcctccggcttgtgc
aggaggcgcttcatcccatcagccatctctcttcctgttctgaagtaggc
tgacagcatgtgtcatgccctcaaccccaaccctctgagccactcttctt
gtagcccagaattaccagcacactttgactgtatcccttggtcctctcaa
tatgtgatcacacttactcaaaattgatattctctatgcaacatccacaa
attcactaacttataacaaaagggtcgctttgtaccccacaccacaccac
ctcagcaattccaaataatgtgacctcacacaaactcacaagactccagg
atctatcctagtcttttttttttttttctcccactgagttttcttgaagg
tttagaagttccaccctctgggctgagtttactctttccctcctccgtgt
cctctctgaatgctctgccatcctcgccacttctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_15399644_15400301
seq2: B6Ng01-184L24.b_47_704

seq1  GAATTCTAGATTTTAATCCATAGGTAACAGAAGGAGACTGCACACCACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGATTTTAATCCATAGGTAACAGAAGGAGACTGCACACCACAC  50

seq1  TGGATACAGCGTGAGCATAGAAAACCTCAAACCGTGCTTTCACAGGACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATACAGCGTGAGCATAGAAAACCTCAAACCGTGCTTTCACAGGACAC  100

seq1  ACTCTGTCCAACAAGGCCACACCTCTTTTTTTTTTTTTCTTGCTGATACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTCCAACAAGGCCACACCTCTTTTTTTTTTTTTCTTGCTGATACT  150

seq1  TTATTATTTTTGTTTTTAATTGGGTATTTATTTCATTTACATTTCCAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTTTTGTTTTTAATTGGGTATTTATTTCATTTACATTTCCAATG  200

seq1  CTATCCCAAAAGTCCCACACACGCTGCCCCACCCACTCCCCCACCCACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCCAAAAGTCCCACACACGCTGCCCCACCCACTCCCCCACCCACCC  250

seq1  AGTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTT  300

seq1  TGCATGATCAATGGGCCTCTCTTTCCACTGATGGATGACTAGGCCATCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGATCAATGGGCCTCTCTTTCCACTGATGGATGACTAGGCCATCTT  350

seq1  CTGATTCATATGCAGCTAGAGACACGAGCTCCAGGGGGTATTGGTTAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTCATATGCAGCTAGAGACACGAGCTCCAGGGGGTATTGGTTAGTT  400

seq1  CATATTGTTGTTCTACCTATAGGATTGCAGATCCCTTCAGCTAATTGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTGTTGTTCTACCTATAGGATTGCAGATCCCTTCAGCTAATTGGGT  450

seq1  AATTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAATAGCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAATAGCTGA  500

seq1  CTGTGAGCATCCACTTCTGTGTTTGCCAGGCCCCGGCATAGTCTCACAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGCATCCACTTCTGTGTTTGCCAGGCCCCGGCATAGTCTCACAAG  550

seq1  AGACAGCCATATCTGGGTCCTTGCAGCAAAATCTTGCTAGTGTATGCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCCATATCTGGGTCCTTGCAGCAAAATCTTGCTAGTGTATGCAAT  600

seq1  GGTGTCAGCGTTTGGAACCTGATTATGGGATGGATCCCCGGATATGGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCAGCGTTTGGAACCTGATTATGGGATGGATCCCCGGATATGGCAG  650

seq1  TCTCTAGA  658
      ||||||||
seq2  TCTCTAGA  658

seq1: chr8_15475444_15476572
seq2: B6Ng01-184L24.g_66_1200 (reverse)

seq1  GAGAAGT-GCGAGGAAGGCAGAGCAAACTCAGAGAAGACACGGAGGA-GG  48
      ||||||| ||||||| ||||||||  | ||||||| ||||||||||| ||
seq2  GAGAAGTGGCGAGGATGGCAGAGC--ATTCAGAGAGGACACGGAGGAGGG  48

seq1  AAAGAGT-AACTCAGCCCAGA-GGTGGAACTTCTAAA-CTTCAAGAAAAA  95
      ||||||| ||||||||||||| ||||||||||||||| ||||||| ||||
seq2  AAAGAGTAAACTCAGCCCAGAGGGTGGAACTTCTAAACCTTCAAG-AAAA  97

seq1  CTCAGGTGGGAG--AAAAAAAAAAAAGACTAGGATAGATTCCTGGAGTCT  143
      |||| |||||||  |||||||||||||||||||||||| |||||||||||
seq2  CTCA-GTGGGAGAAAAAAAAAAAAAAGACTAGGATAGA-TCCTGGAGTCT  145

seq1  TGTGAGTTTGTGTGAGGTCACATTATTTGGAATTGCTGAGGTGGTGT-GT  192
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGTGAGTTTGTGTGAGGTCACATTATTTGGAATTGCTGAGGTGGTGTGGT  195

seq1  GT-GGGTAC-AAGCGACCCTTTTGTTATAAGTTAGTGAATTTGTGGATGT  240
      || |||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGTACAAAGCGACCCTTTTGTTATAAGTTAGTGAATTTGTGGATGT  245

seq1  TGCATAGAGAATATCAATTTTGAGTAAGTGTGATCACATA-TGAGAGGAC  289
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGCATAGAGAATATCAATTTTGAGTAAGTGTGATCACATATTGAGAGGAC  295

seq1  CAAGGGATACAGTCAAAGTGTGCTGGTAATTCTGGGCTACAAGAAGAGTG  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGATACAGTCAAAGTGTGCTGGTAATTCTGGGCTACAAGAAGAGTG  345

seq1  GCTCAGAGGGTTGGGGTTGAGGGCATGACACATGCTGTCAGCCTACTTCA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGAGGGTTGGGGTTGAGGGCATGACACATGCTGTCAGCCTACTTCA  395

seq1  GAACAGGAAGAGAGATGGCTGATGGGATGAAGCGCCTCCTGCACAAGCCG  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGGAAGAGAGATGGCTGATGGGATGAAGCGCCTCCTGCACAAGCCG  445

seq1  GAGGAGCTCGAGTTGGATCCTGAGCACCCAGTAAAATCTGGTGTGAGAGC  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGCTCGAGTTGGATCCTGAGCACCCAGTAAAATCTGGTGTGAGAGC  495

seq1  ACACATCCATAACCCTATTGTTACAGGGACAGGAGGCAGAGGCCAGCAGA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCCATAACCCTATTGTTACAGGGACAGGAGGCAGAGGCCAGCAGA  545

seq1  TCCTTAGAGCTCACTGTTTAATTGATATTGTTTAAACAGCAGGGTTTGTG  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGAGCTCACTGTTTAATTGATATTGTTTAAACAGCAGGGTTTGTG  595

seq1  AGAGACTCAGATATAAGGTAGGAAGAGTTCAGGGAAGGTACCAGGCAGCC  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTCAGATATAAGGTAGGAAGAGTTCAGGGAAGGTACCAGGCAGCC  645

seq1  TCTACCCTCTGCATATATGCACGGGTTCCACACATGCAGACCAACAAGAA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCCTCTGCATATATGCACGGGTTCCACACATGCAGACCAACAAGAA  695

seq1  GTCAGAGCACCATGGAACATTCTAGAGAGAAGATAAACTCAGTTTTAATG  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGCACCATGGAACATTCTAGAGAGAAGATAAACTCAGTTTTAATG  745

seq1  AGGACAACTCTCACTGAGCTGCAATATCCATCCATTTTCTGAGTGCGCGT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAACTCTCACTGAGCTGCAATATCCATCCATTTTCTGAGTGCGCGT  795

seq1  CATCGACTCCTGTTTTCAGATGATGAAAACAATGGCGTCCATAGTCAGGA  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGACTCCTGTTTTCAGATGATGAAAACAATGGCGTCCATAGTCAGGA  845

seq1  AGGGGTTTGCTTGTCCTTCTGTGCCCAAGAGTTAGCAGAAGTCAATGTAT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTTTGCTTGTCCTTCTGTGCCCAAGAGTTAGCAGAAGTCAATGTAT  895

seq1  TACTATCTTCTGTGGGCAAGTTGGCCTCCATGCTTCTGTTTCACTATTAG  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATCTTCTGTGGGCAAGTTGGCCTCCATGCTTCTGTTTCACTATTAG  945

seq1  CCCAATCTGAAGTGATGCTTACAATACTGAATGGCCCAGCCCTTATGCAT  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATCTGAAGTGATGCTTACAATACTGAATGGCCCAGCCCTTATGCAT  995

seq1  CAAGTTGTGGTTATTATTAATCACACTTTAGTTCCATATGCAAGAAGTGC  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTGTGGTTATTATTAATCACACTTTAGTTCCATATGCAAGAAGTGC  1045

seq1  GCATTGTATGTAGAAAGAGACCATCCTATCATCTGAATTTTACTCTGTAA  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGTATGTAGAAAGAGACCATCCTATCATCTGAATTTTACTCTGTAA  1095

seq1  CAATTTCCTAGTGATTTGAGGCTCCTCACATTCGGAATTC  1129
      ||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTCCTAGTGATTTGAGGCTCCTCACATTCGGAATTC  1135